RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 DEFB132Q7Z7B7 95 aa8.97□□□□□ -0.97
SCAPER-205ENST00000562948 DNAH12Q6ZR08 3092 aa8.97□□□□□ -0.97
SCAPER-205ENST00000562948 MYO5AQ9Y4I1 1855 aaKnown RBP8.96□□□□□ -0.97
SCAPER-205ENST00000562948 ANKRD44Q8N8A2 993 aa8.96□□□□□ -0.97
SCAPER-205ENST00000562948 OTUD7AQ8TE49 926 aaPredicted RBP8.96□□□□□ -0.97
SCAPER-205ENST00000562948 HYPKQ9NX55 129 aa8.96□□□□□ -0.97
SCAPER-205ENST00000562948 UTYO14607 1347 aa8.96□□□□□ -0.97
SCAPER-205ENST00000562948 SUCLG2Q96I99 432 aa8.96□□□□□ -0.98
SCAPER-205ENST00000562948 MYD88Q99836 296 aa8.96□□□□□ -0.98
SCAPER-205ENST00000562948 LRRFIP2Q9Y608 721 aaKnown RBP8.96□□□□□ -0.98
SCAPER-205ENST00000562948 C16orf71Q8IYS4 520 aaPredicted RBP8.96□□□□□ -0.98
SCAPER-205ENST00000562948 METTL22Q9BUU2 404 aaPredicted RBP8.96□□□□□ -0.98
SCAPER-205ENST00000562948 STK31Q9BXU1 1019 aa8.96□□□□□ -0.98
SCAPER-205ENST00000562948 ZNF330Q9Y3S2 320 aaPredicted RBP8.96□□□□□ -0.98
SCAPER-205ENST00000562948 GCKRQ14397 625 aa8.95□□□□□ -0.98
SCAPER-205ENST00000562948 FOXO4P98177 505 aa8.95□□□□□ -0.98
SCAPER-205ENST00000562948 COL15A1P39059 1388 aa8.95□□□□□ -0.98
SCAPER-205ENST00000562948 EZH2Q15910 746 aaKnown RBP8.95□□□□□ -0.98
SCAPER-205ENST00000562948 MKI67P46013 3256 aaKnown RBP8.95□□□□□ -0.98
SCAPER-205ENST00000562948 FAM196AQ6ZSG2 479 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 CCDC24Q8N4L8 307 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 PLBD2Q8NHP8 589 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 ARHGEF1Q92888 912 aaKnown RBP8.94□□□□□ -0.98
SCAPER-205ENST00000562948 CAMKK2Q96RR4 588 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 ISCA1Q9BUE6 129 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 CCNL1Q9UK58 526 aaPredicted RBP8.94□□□□□ -0.98
SCAPER-205ENST00000562948 EN1Q05925 392 aaPredicted RBP8.94□□□□□ -0.98
SCAPER-205ENST00000562948 BICC1Q9H694 974 aaKnown RBP8.94□□□□□ -0.98
SCAPER-205ENST00000562948 CCDC87Q9NVE4 849 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 PRDM4Q9UKN5 801 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 COL11A2P13942 1736 aaPredicted RBP8.94□□□□□ -0.98
SCAPER-205ENST00000562948 GPTP24298 496 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 TXNRD1Q16881 649 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 ILDR2Q71H61 639 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 AKT1S1Q96B36 256 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 FAM89AQ96GI7 184 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 DDX19BQ9UMR2 479 aa8.94□□□□□ -0.98
SCAPER-205ENST00000562948 NRXN2Q9P2S2 1712 aa8.93□□□□□ -0.98
SCAPER-205ENST00000562948 MAP3K15Q6ZN16 1313 aa8.93□□□□□ -0.98
SCAPER-205ENST00000562948 TPM2P07951 284 aa8.93□□□□□ -0.98
SCAPER-205ENST00000562948 API5Q9BZZ5 524 aaKnown RBP8.93□□□□□ -0.98
SCAPER-205ENST00000562948 PA2G4Q9UQ80 394 aaKnown RBP8.93□□□□□ -0.98
SCAPER-205ENST00000562948 SMARCA5O60264 1052 aaPredicted RBP8.93□□□□□ -0.98
SCAPER-205ENST00000562948 RFX5P48382 616 aaPredicted RBP8.93□□□□□ -0.98
SCAPER-205ENST00000562948 TBC1D9BQ66K14 1250 aa8.93□□□□□ -0.98
SCAPER-205ENST00000562948 CARMIL3Q8ND23 1372 aa8.93□□□□□ -0.98
SCAPER-205ENST00000562948 LAMA2P24043 3122 aaKnown RBP8.93□□□□□ -0.98
SCAPER-205ENST00000562948 CACNA1SQ13698 1873 aa8.93□□□□□ -0.98
SCAPER-205ENST00000562948 HTTP42858 3142 aa8.93□□□□□ -0.98
SCAPER-205ENST00000562948 GOLGA6L3A6NEY3 463 aa8.93□□□□□ -0.98
SCAPER-205ENST00000562948 IPO8O15397 1037 aaKnown RBP8.93□□□□□ -0.98
SCAPER-205ENST00000562948 IL6STP40189 918 aaPredicted RBP8.93□□□□□ -0.98
SCAPER-205ENST00000562948 SUSD4Q5VX71 490 aa8.93□□□□□ -0.98
SCAPER-205ENST00000562948 ZNF34Q8IZ26 560 aa8.93□□□□□ -0.98
SCAPER-205ENST00000562948 QSER1Q2KHR3 1735 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 CNTNAP4Q9C0A0 1308 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 PHF14O94880 888 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 HDAC1Q13547 482 aaPredicted RBP8.92□□□□□ -0.98
SCAPER-205ENST00000562948 UBE3BQ7Z3V4 1068 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 TSHZ3Q63HK5 1081 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 GIGYF2Q6Y7W6 1299 aaKnown RBP8.92□□□□□ -0.98
SCAPER-205ENST00000562948 NLRP10Q86W26 655 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 LINS1Q8NG48 757 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 ABCC12Q96J65 1359 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 H7C1W4 665 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 GNPATO15228 680 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 APBA3O96018 575 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 RIC3Q7Z5B4 369 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 DZIP3Q86Y13 1208 aaKnown RBP8.92□□□□□ -0.98
SCAPER-205ENST00000562948 SMC5Q8IY18 1101 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 SRCIN1Q9C0H9 1055 aa8.92□□□□□ -0.98
SCAPER-205ENST00000562948 GRM8O00222 908 aa8.91□□□□□ -0.98
SCAPER-205ENST00000562948 POLA2Q14181 598 aa8.91□□□□□ -0.98
SCAPER-205ENST00000562948 USPL1Q5W0Q7 1092 aa8.91□□□□□ -0.98
SCAPER-205ENST00000562948 NUTM1Q86Y26 1132 aa8.91□□□□□ -0.98
SCAPER-205ENST00000562948 PLSCR1O15162 318 aa8.91□□□□□ -0.98
SCAPER-205ENST00000562948 STARD3NLO95772 234 aa8.91□□□□□ -0.98
SCAPER-205ENST00000562948 TCIRG1Q13488 830 aa8.91□□□□□ -0.98
SCAPER-205ENST00000562948 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.91□□□□□ -0.98
SCAPER-205ENST00000562948 EXOC6BQ9Y2D4 811 aa8.91□□□□□ -0.98
SCAPER-205ENST00000562948 ERBB4Q15303 1308 aa8.91□□□□□ -0.98
SCAPER-205ENST00000562948 CCT4P50991 539 aaKnown RBP8.91□□□□□ -0.98
SCAPER-205ENST00000562948 PPP1R42Q7Z4L9 355 aa8.91□□□□□ -0.98
SCAPER-205ENST00000562948 PNPLA7Q6ZV29 1317 aa8.91□□□□□ -0.98
SCAPER-205ENST00000562948 SALL3Q9BXA9 1300 aa8.91□□□□□ -0.98
SCAPER-205ENST00000562948 KIAA1551Q9HCM1 1747 aa8.9□□□□□ -0.98
SCAPER-205ENST00000562948 LRP5O75197 1615 aa8.9□□□□□ -0.98
SCAPER-205ENST00000562948 XRCC6P12956 609 aaKnown RBP eCLIP8.9□□□□□ -0.98
SCAPER-205ENST00000562948 COL23A1Q86Y22 540 aaPredicted RBP8.9□□□□□ -0.98
SCAPER-205ENST00000562948 ZNF594Q96JF6 807 aaPredicted RBP8.9□□□□□ -0.98
SCAPER-205ENST00000562948 CCDC85AQ96PX6 553 aaPredicted RBP8.9□□□□□ -0.98
SCAPER-205ENST00000562948 AKAP11Q9UKA4 1901 aa8.9□□□□□ -0.98
SCAPER-205ENST00000562948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.9□□□□□ -0.99
SCAPER-205ENST00000562948 NTSR2O95665 410 aa8.9□□□□□ -0.99
SCAPER-205ENST00000562948 PDZRN3Q9UPQ7 1066 aa8.9□□□□□ -0.99
SCAPER-205ENST00000562948 A0A087WZG4 1122 aa8.89□□□□□ -0.99
SCAPER-205ENST00000562948 ESPNB1AK53 854 aa8.89□□□□□ -0.99
SCAPER-205ENST00000562948 SNAP23O00161 211 aa8.89□□□□□ -0.99
SCAPER-205ENST00000562948 SASH1O94885 1247 aa8.89□□□□□ -0.99
SCAPER-205ENST00000562948 GYS1P13807 737 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms