RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 SLC10A5Q5PT55 438 aa17.09■□□□□ 0.33
AC009055.1-201ENST00000562656 COPS6Q7L5N1 327 aa17.09■□□□□ 0.33
AC009055.1-201ENST00000562656 RPGRQ92834 1020 aaKnown RBP17.09■□□□□ 0.33
AC009055.1-201ENST00000562656 CRAMP1Q96RY5 1269 aa17.09■□□□□ 0.33
AC009055.1-201ENST00000562656 PSMD1Q99460 953 aa17.09■□□□□ 0.33
AC009055.1-201ENST00000562656 ANKRD36CQ5JPF3 1778 aa17.08■□□□□ 0.33
AC009055.1-201ENST00000562656 RBM17Q96I25 401 aaKnown RBP17.08■□□□□ 0.32
AC009055.1-201ENST00000562656 NLRP3Q96P20 1036 aa17.08■□□□□ 0.32
AC009055.1-201ENST00000562656 UTP14AQ9BVJ6 771 aaKnown RBP17.08■□□□□ 0.32
AC009055.1-201ENST00000562656 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
AC009055.1-201ENST00000562656 SNED1Q8TER0 1413 aa17.07■□□□□ 0.32
AC009055.1-201ENST00000562656 ANXA1P04083 346 aa17.07■□□□□ 0.32
AC009055.1-201ENST00000562656 XAGE3Q8WTP9 111 aa17.07■□□□□ 0.32
AC009055.1-201ENST00000562656 IQCA1LA6NCM1 817 aa17.06■□□□□ 0.32
AC009055.1-201ENST00000562656 DDNO94850 711 aaPredicted RBP17.06■□□□□ 0.32
AC009055.1-201ENST00000562656 CALD1Q05682 793 aaKnown RBP17.06■□□□□ 0.32
AC009055.1-201ENST00000562656 KRT24Q2M2I5 525 aa17.06■□□□□ 0.32
AC009055.1-201ENST00000562656 OLFM4Q6UX06 510 aa17.06■□□□□ 0.32
AC009055.1-201ENST00000562656 SYNE4Q8N205 404 aa17.06■□□□□ 0.32
AC009055.1-201ENST00000562656 L3MBTL3Q96JM7 780 aaPredicted RBP17.06■□□□□ 0.32
AC009055.1-201ENST00000562656 ZNF277Q9NRM2 450 aaPredicted RBP17.06■□□□□ 0.32
AC009055.1-201ENST00000562656 DBF4Q9UBU7 674 aaPredicted RBP17.06■□□□□ 0.32
AC009055.1-201ENST00000562656 SCN4AP35499 1836 aa17.05■□□□□ 0.32
AC009055.1-201ENST00000562656 ZNF853P0CG23 659 aa17.05■□□□□ 0.32
AC009055.1-201ENST00000562656 ZEB1P37275 1124 aaPredicted RBP17.05■□□□□ 0.32
AC009055.1-201ENST00000562656 IARSP41252 1262 aaKnown RBP17.05■□□□□ 0.32
AC009055.1-201ENST00000562656 AIMP1Q12904 312 aaKnown RBP17.05■□□□□ 0.32
AC009055.1-201ENST00000562656 TCIRG1Q13488 830 aa17.05■□□□□ 0.32
AC009055.1-201ENST00000562656 HDGFL1Q5TGJ6 251 aa17.05■□□□□ 0.32
AC009055.1-201ENST00000562656 NECTIN2Q92692 538 aa17.05■□□□□ 0.32
AC009055.1-201ENST00000562656 CHPF2Q9P2E5 772 aa17.05■□□□□ 0.32
AC009055.1-201ENST00000562656 APAF1O14727 1248 aa17.04■□□□□ 0.32
AC009055.1-201ENST00000562656 NLRP10Q86W26 655 aa17.04■□□□□ 0.32
AC009055.1-201ENST00000562656 PLBD2Q8NHP8 589 aa17.04■□□□□ 0.32
AC009055.1-201ENST00000562656 IFT57Q9NWB7 429 aa17.04■□□□□ 0.32
AC009055.1-201ENST00000562656 FZD9O00144 591 aa17.03■□□□□ 0.32
AC009055.1-201ENST00000562656 GNAI1P63096 354 aa17.03■□□□□ 0.32
AC009055.1-201ENST00000562656 KLRG1Q96E93 195 aa17.03■□□□□ 0.32
AC009055.1-201ENST00000562656 MBIPQ9NS73 344 aa17.03■□□□□ 0.32
AC009055.1-201ENST00000562656 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
AC009055.1-201ENST00000562656 PPEF1O14829 653 aaPredicted RBP17.02■□□□□ 0.32
AC009055.1-201ENST00000562656 DUSP27Q5VZP5 1158 aa17.02■□□□□ 0.32
AC009055.1-201ENST00000562656 CHADLQ6NUI6 762 aa17.02■□□□□ 0.32
AC009055.1-201ENST00000562656 ANKRD13DQ6ZTN6 518 aa17.02■□□□□ 0.32
AC009055.1-201ENST00000562656 C3orf67Q6ZVT6 689 aa17.02■□□□□ 0.32
AC009055.1-201ENST00000562656 JDP2Q8WYK2 163 aa17.02■□□□□ 0.32
AC009055.1-201ENST00000562656 TMX4Q9H1E5 349 aaPredicted RBP17.02■□□□□ 0.32
AC009055.1-201ENST00000562656 SH3TC1Q8TE82 1336 aa17.01■□□□□ 0.31
AC009055.1-201ENST00000562656 JMYQ8N9B5 988 aa17.01■□□□□ 0.31
AC009055.1-201ENST00000562656 CHMP4AQ9BY43 222 aa17.01■□□□□ 0.31
AC009055.1-201ENST00000562656 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
AC009055.1-201ENST00000562656 TRMT112Q9UI30 125 aaKnown RBP17.01■□□□□ 0.31
AC009055.1-201ENST00000562656 ATP6V0A2Q9Y487 856 aa17.01■□□□□ 0.31
AC009055.1-201ENST00000562656 ZNF541Q9H0D2 1346 aa17■□□□□ 0.31
AC009055.1-201ENST00000562656 BBOX1O75936 387 aa17■□□□□ 0.31
AC009055.1-201ENST00000562656 HTRA3P83110 453 aa17■□□□□ 0.31
AC009055.1-201ENST00000562656 GPC2Q8N158 579 aa17■□□□□ 0.31
AC009055.1-201ENST00000562656 TAF1DQ9H5J8 278 aaPredicted RBP17■□□□□ 0.31
AC009055.1-201ENST00000562656 LAMB2P55268 1798 aa17■□□□□ 0.31
AC009055.1-201ENST00000562656 TRIM28Q13263 835 aaKnown RBP16.99■□□□□ 0.31
AC009055.1-201ENST00000562656 LDHDQ86WU2 507 aa16.99■□□□□ 0.31
AC009055.1-201ENST00000562656 ISCA1Q9BUE6 129 aa16.99■□□□□ 0.31
AC009055.1-201ENST00000562656 HACL1Q9UJ83 578 aa16.99■□□□□ 0.31
AC009055.1-201ENST00000562656 ABCC4O15439 1325 aa16.98■□□□□ 0.31
AC009055.1-201ENST00000562656 EIF6P56537 245 aaKnown RBP16.98■□□□□ 0.31
AC009055.1-201ENST00000562656 SP8Q8IXZ3 490 aa16.98■□□□□ 0.31
AC009055.1-201ENST00000562656 HCLS1P14317 486 aaPredicted RBP16.97■□□□□ 0.31
AC009055.1-201ENST00000562656 DDX46Q7L014 1031 aaKnown RBP16.97■□□□□ 0.31
AC009055.1-201ENST00000562656 TMC4Q7Z404 712 aa16.97■□□□□ 0.31
AC009055.1-201ENST00000562656 PNMA8AQ86V59 439 aaPredicted RBP16.97■□□□□ 0.31
AC009055.1-201ENST00000562656 LARGE2Q8N3Y3 721 aa16.97■□□□□ 0.31
AC009055.1-201ENST00000562656 SUPT20HQ8NEM7 779 aa16.97■□□□□ 0.31
AC009055.1-201ENST00000562656 RTFDC1Q9BY42 306 aaPredicted RBP16.97■□□□□ 0.31
AC009055.1-201ENST00000562656 POTEIP0CG38 1075 aa16.96■□□□□ 0.31
AC009055.1-201ENST00000562656 POTEJP0CG39 1038 aa16.96■□□□□ 0.31
AC009055.1-201ENST00000562656 EPHX2P34913 555 aa16.96■□□□□ 0.31
AC009055.1-201ENST00000562656 GRAPQ13588 217 aa16.96■□□□□ 0.31
AC009055.1-201ENST00000562656 CCDC27Q2M243 656 aa16.96■□□□□ 0.31
AC009055.1-201ENST00000562656 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
AC009055.1-201ENST00000562656 GRAPLQ8TC17 118 aaPredicted RBP16.96■□□□□ 0.31
AC009055.1-201ENST00000562656 COL4A5P29400 1685 aa16.95■□□□□ 0.3
AC009055.1-201ENST00000562656 TCERG1O14776 1098 aaKnown RBP16.95■□□□□ 0.3
AC009055.1-201ENST00000562656 GOLGA2Q08379 1002 aa16.95■□□□□ 0.3
AC009055.1-201ENST00000562656 CREBZFQ9NS37 354 aa16.95■□□□□ 0.3
AC009055.1-201ENST00000562656 DDX60Q8IY21 1712 aaKnown RBP16.95■□□□□ 0.3
AC009055.1-201ENST00000562656 ADAMTSL1Q8N6G6 1762 aa16.94■□□□□ 0.3
AC009055.1-201ENST00000562656 PPIP5K2O43314 1243 aa16.94■□□□□ 0.3
AC009055.1-201ENST00000562656 SF3B3Q15393 1217 aaKnown RBP16.94■□□□□ 0.3
AC009055.1-201ENST00000562656 RIC3Q7Z5B4 369 aa16.94■□□□□ 0.3
AC009055.1-201ENST00000562656 NIM1KQ8IY84 436 aa16.94■□□□□ 0.3
AC009055.1-201ENST00000562656 MPNDQ8N594 471 aa16.94■□□□□ 0.3
AC009055.1-201ENST00000562656 PASKQ96RG2 1323 aa16.94■□□□□ 0.3
AC009055.1-201ENST00000562656 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
AC009055.1-201ENST00000562656 HSP90B1P14625 803 aaKnown RBP16.93■□□□□ 0.3
AC009055.1-201ENST00000562656 CCDC184Q52MB2 194 aa16.93■□□□□ 0.3
AC009055.1-201ENST00000562656 IFFO2Q5TF58 517 aa16.93■□□□□ 0.3
AC009055.1-201ENST00000562656 CCDC30Q5VVM6 783 aa16.93■□□□□ 0.3
AC009055.1-201ENST00000562656 DPP8Q6V1X1 898 aaPredicted RBP16.93■□□□□ 0.3
AC009055.1-201ENST00000562656 C8orf58Q8NAV2 365 aa16.93■□□□□ 0.3
AC009055.1-201ENST00000562656 FAM89AQ96GI7 184 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms