RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 NCBP3Q53F19 620 aaKnown RBP23.03■■□□□ 1.28
CMTM3-204ENST00000562357 ANKRD13DQ6ZTN6 518 aa23.03■■□□□ 1.28
CMTM3-204ENST00000562357 WWC1Q8IX03 1113 aa23.03■■□□□ 1.28
CMTM3-204ENST00000562357 NLRP3Q96P20 1036 aa23.03■■□□□ 1.28
CMTM3-204ENST00000562357 GOLGA2Q08379 1002 aa23.02■■□□□ 1.28
CMTM3-204ENST00000562357 RBM17Q96I25 401 aaKnown RBP23.02■■□□□ 1.28
CMTM3-204ENST00000562357 NMRK2Q9NPI5 230 aa23.02■■□□□ 1.28
CMTM3-204ENST00000562357 CCDC30Q5VVM6 783 aa23.01■■□□□ 1.27
CMTM3-204ENST00000562357 NLRP10Q86W26 655 aa23.01■■□□□ 1.27
CMTM3-204ENST00000562357 RTKN2Q8IZC4 609 aa23.01■■□□□ 1.27
CMTM3-204ENST00000562357 TRMT112Q9UI30 125 aaKnown RBP23.01■■□□□ 1.27
CMTM3-204ENST00000562357 ARFGEF2Q9Y6D5 1785 aa23.01■■□□□ 1.27
CMTM3-204ENST00000562357 SLX4Q8IY92 1834 aa23.01■■□□□ 1.27
CMTM3-204ENST00000562357 SBF1O95248 1867 aa23■■□□□ 1.27
CMTM3-204ENST00000562357 DPY19L2Q6NUT2 758 aa23■■□□□ 1.27
CMTM3-204ENST00000562357 TMX4Q9H1E5 349 aaPredicted RBP23■■□□□ 1.27
CMTM3-204ENST00000562357 IL16Q14005 1332 aa23■■□□□ 1.27
CMTM3-204ENST00000562357 TNRC6CQ9HCJ0 1690 aaKnown RBP23■■□□□ 1.27
CMTM3-204ENST00000562357 CACNA1SQ13698 1873 aa22.99■■□□□ 1.27
CMTM3-204ENST00000562357 TOMM70O94826 608 aa22.99■■□□□ 1.27
CMTM3-204ENST00000562357 PRELPP51888 382 aa22.99■■□□□ 1.27
CMTM3-204ENST00000562357 RIC3Q7Z5B4 369 aa22.99■■□□□ 1.27
CMTM3-204ENST00000562357 C8orf58Q8NAV2 365 aa22.99■■□□□ 1.27
CMTM3-204ENST00000562357 C7orf43Q8WVR3 580 aa22.99■■□□□ 1.27
CMTM3-204ENST00000562357 TSR2Q969E8 191 aaKnown RBP22.99■■□□□ 1.27
CMTM3-204ENST00000562357 SH3TC1Q8TE82 1336 aa22.99■■□□□ 1.27
CMTM3-204ENST00000562357 GLTPD2A6NH11 291 aa22.98■■□□□ 1.27
CMTM3-204ENST00000562357 HOXA10P31260 410 aaPredicted RBP22.98■■□□□ 1.27
CMTM3-204ENST00000562357 FKBP4Q02790 459 aaKnown RBP eCLIP22.98■■□□□ 1.27
CMTM3-204ENST00000562357 SLC10A5Q5PT55 438 aa22.98■■□□□ 1.27
CMTM3-204ENST00000562357 CC2D2BQ6DHV5 1058 aa22.98■■□□□ 1.27
CMTM3-204ENST00000562357 FAM9BQ8IZU0 186 aa22.98■■□□□ 1.27
CMTM3-204ENST00000562357 DDX58O95786 925 aaKnown RBP22.97■■□□□ 1.27
CMTM3-204ENST00000562357 CRAMP1Q96RY5 1269 aa22.97■■□□□ 1.27
CMTM3-204ENST00000562357 STK31Q9BXU1 1019 aa22.97■■□□□ 1.27
CMTM3-204ENST00000562357 SALL2Q9Y467 1007 aaPredicted RBP22.97■■□□□ 1.27
CMTM3-204ENST00000562357 ANKRD36CQ5JPF3 1778 aa22.96■■□□□ 1.27
CMTM3-204ENST00000562357 FER1L6Q2WGJ9 1857 aa22.96■■□□□ 1.27
CMTM3-204ENST00000562357 GRIPAP1Q4V328 841 aa22.96■■□□□ 1.27
CMTM3-204ENST00000562357 RRAGCQ9HB90 399 aa22.96■■□□□ 1.27
CMTM3-204ENST00000562357 TIAM2Q8IVF5 1701 aa22.95■■□□□ 1.26
CMTM3-204ENST00000562357 ATP5J2-PTCD1G3V325 749 aa22.94■■□□□ 1.26
CMTM3-204ENST00000562357 PPEF1O14829 653 aaPredicted RBP22.94■■□□□ 1.26
CMTM3-204ENST00000562357 WDR63Q8IWG1 891 aa22.94■■□□□ 1.26
CMTM3-204ENST00000562357 ISCA1Q9BUE6 129 aa22.94■■□□□ 1.26
CMTM3-204ENST00000562357 HCLS1P14317 486 aaPredicted RBP22.93■■□□□ 1.26
CMTM3-204ENST00000562357 VEGFAP15692 232 aaPredicted RBP22.93■■□□□ 1.26
CMTM3-204ENST00000562357 TWISTNBQ3B726 338 aaPredicted RBP22.93■■□□□ 1.26
CMTM3-204ENST00000562357 TSPYL6Q8N831 410 aa22.93■■□□□ 1.26
CMTM3-204ENST00000562357 PHAXQ9H814 394 aaKnown RBP22.93■■□□□ 1.26
CMTM3-204ENST00000562357 OLFM4Q6UX06 510 aa22.92■■□□□ 1.26
CMTM3-204ENST00000562357 C3orf67Q6ZVT6 689 aa22.92■■□□□ 1.26
CMTM3-204ENST00000562357 DDX46Q7L014 1031 aaKnown RBP22.92■■□□□ 1.26
CMTM3-204ENST00000562357 RBM46Q8TBY0 533 aaKnown RBP22.92■■□□□ 1.26
CMTM3-204ENST00000562357 ZNF277Q9NRM2 450 aaPredicted RBP22.92■■□□□ 1.26
CMTM3-204ENST00000562357 HSP90B1P14625 803 aaKnown RBP22.91■■□□□ 1.26
CMTM3-204ENST00000562357 HSPA6P17066 643 aa22.91■■□□□ 1.26
CMTM3-204ENST00000562357 TRIM28Q13263 835 aaKnown RBP22.91■■□□□ 1.26
CMTM3-204ENST00000562357 CCDC88AQ3V6T2 1871 aa22.9■■□□□ 1.26
CMTM3-204ENST00000562357 FANCIQ9NVI1 1328 aa22.9■■□□□ 1.26
CMTM3-204ENST00000562357 TCERG1O14776 1098 aaKnown RBP22.9■■□□□ 1.26
CMTM3-204ENST00000562357 IARSP41252 1262 aaKnown RBP22.9■■□□□ 1.26
CMTM3-204ENST00000562357 SYNE4Q8N205 404 aa22.9■■□□□ 1.26
CMTM3-204ENST00000562357 PSMD1Q99460 953 aa22.9■■□□□ 1.26
CMTM3-204ENST00000562357 JDP2Q8WYK2 163 aa22.89■■□□□ 1.25
CMTM3-204ENST00000562357 ZNF428Q96B54 188 aa22.89■■□□□ 1.25
CMTM3-204ENST00000562357 FAM89AQ96GI7 184 aa22.89■■□□□ 1.25
CMTM3-204ENST00000562357 MYD88Q99836 296 aa22.89■■□□□ 1.25
CMTM3-204ENST00000562357 ABCC4O15439 1325 aa22.88■■□□□ 1.25
CMTM3-204ENST00000562357 BBOX1O75936 387 aa22.88■■□□□ 1.25
CMTM3-204ENST00000562357 MYH16Q9H6N6 1097 aa22.88■■□□□ 1.25
CMTM3-204ENST00000562357 ATP6V0A2Q9Y487 856 aa22.88■■□□□ 1.25
CMTM3-204ENST00000562357 DICER1Q9UPY3 1922 aaKnown RBP22.87■■□□□ 1.25
CMTM3-204ENST00000562357 NEXNQ0ZGT2 675 aa22.87■■□□□ 1.25
CMTM3-204ENST00000562357 FSTL1Q12841 308 aa22.87■■□□□ 1.25
CMTM3-204ENST00000562357 GRAPQ13588 217 aa22.86■■□□□ 1.25
CMTM3-204ENST00000562357 RTL5Q5HYW3 569 aaPredicted RBP22.86■■□□□ 1.25
CMTM3-204ENST00000562357 CCDC191Q8NCU4 936 aa22.86■■□□□ 1.25
CMTM3-204ENST00000562357 SMC1BQ8NDV3 1235 aa22.86■■□□□ 1.25
CMTM3-204ENST00000562357 GRAPLQ8TC17 118 aaPredicted RBP22.86■■□□□ 1.25
CMTM3-204ENST00000562357 METTL22Q9BUU2 404 aaPredicted RBP22.86■■□□□ 1.25
CMTM3-204ENST00000562357 CWC25Q9NXE8 425 aaPredicted RBP22.86■■□□□ 1.25
CMTM3-204ENST00000562357 IRS4O14654 1257 aaPredicted RBP22.85■■□□□ 1.25
CMTM3-204ENST00000562357 KSR2Q6VAB6 950 aa22.85■■□□□ 1.25
CMTM3-204ENST00000562357 TMC4Q7Z404 712 aa22.85■■□□□ 1.25
CMTM3-204ENST00000562357 ZBTB38Q8NAP3 1195 aaPredicted RBP22.85■■□□□ 1.25
CMTM3-204ENST00000562357 SUPT20HQ8NEM7 779 aa22.85■■□□□ 1.25
CMTM3-204ENST00000562357 MAP3K2Q9Y2U5 619 aa22.85■■□□□ 1.25
CMTM3-204ENST00000562357 IQCA1LA6NCM1 817 aa22.84■■□□□ 1.25
CMTM3-204ENST00000562357 DDNO94850 711 aaPredicted RBP22.84■■□□□ 1.25
CMTM3-204ENST00000562357 SLC4A2P04920 1241 aa22.84■■□□□ 1.25
CMTM3-204ENST00000562357 LARGE2Q8N3Y3 721 aa22.84■■□□□ 1.25
CMTM3-204ENST00000562357 PI4KAP2A4QPH2 592 aa22.83■■□□□ 1.25
CMTM3-204ENST00000562357 APLP1P51693 650 aa22.83■■□□□ 1.25
CMTM3-204ENST00000562357 SP8Q8IXZ3 490 aa22.83■■□□□ 1.25
CMTM3-204ENST00000562357 PI4KAP1Q8N8J0 262 aa22.83■■□□□ 1.25
CMTM3-204ENST00000562357 SNED1Q8TER0 1413 aa22.82■■□□□ 1.24
CMTM3-204ENST00000562357 EIF6P56537 245 aaKnown RBP22.82■■□□□ 1.24
CMTM3-204ENST00000562357 SF3B3Q15393 1217 aaKnown RBP22.82■■□□□ 1.24
CMTM3-204ENST00000562357 DPP8Q6V1X1 898 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms