RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 PAXIP1Q6ZW49 1069 aaPredicted RBP26.91■■□□□ 1.9
PDXDC1-207ENST00000562119 NUTM1Q86Y26 1132 aa26.91■■□□□ 1.9
PDXDC1-207ENST00000562119 GPR101Q96P66 508 aaPredicted RBP26.91■■□□□ 1.9
PDXDC1-207ENST00000562119 NPC1L1Q9UHC9 1359 aa26.91■■□□□ 1.9
PDXDC1-207ENST00000562119 CCDC85CA6NKD9 419 aa26.9■■□□□ 1.9
PDXDC1-207ENST00000562119 TRAF5O00463 557 aa26.9■■□□□ 1.9
PDXDC1-207ENST00000562119 LMOD1P29536 600 aaPredicted RBP26.9■■□□□ 1.9
PDXDC1-207ENST00000562119 GRM1Q13255 1194 aa26.9■■□□□ 1.9
PDXDC1-207ENST00000562119 ECE1P42892 770 aa26.89■■□□□ 1.9
PDXDC1-207ENST00000562119 RGS19P49795 217 aa26.88■■□□□ 1.89
PDXDC1-207ENST00000562119 DCTN1Q14203 1278 aa26.88■■□□□ 1.89
PDXDC1-207ENST00000562119 CC2D2BQ6DHV5 1058 aa26.88■■□□□ 1.89
PDXDC1-207ENST00000562119 BEGAINQ9BUH8 593 aa26.88■■□□□ 1.89
PDXDC1-207ENST00000562119 TSKSQ9UJT2 592 aa26.88■■□□□ 1.89
PDXDC1-207ENST00000562119 MLLT1Q03111 559 aaPredicted RBP26.87■■□□□ 1.89
PDXDC1-207ENST00000562119 RTF1Q92541 710 aaKnown RBP26.87■■□□□ 1.89
PDXDC1-207ENST00000562119 TLL2Q9Y6L7 1015 aa26.87■■□□□ 1.89
PDXDC1-207ENST00000562119 USP50Q70EL3 339 aaPredicted RBP26.86■■□□□ 1.89
PDXDC1-207ENST00000562119 LARGE2Q8N3Y3 721 aa26.86■■□□□ 1.89
PDXDC1-207ENST00000562119 AOC2O75106 756 aa26.85■■□□□ 1.89
PDXDC1-207ENST00000562119 HOXA10P31260 410 aaPredicted RBP26.85■■□□□ 1.89
PDXDC1-207ENST00000562119 NYXQ9GZU5 481 aa26.85■■□□□ 1.89
PDXDC1-207ENST00000562119 RPGRQ92834 1020 aaKnown RBP26.84■■□□□ 1.89
PDXDC1-207ENST00000562119 NGEFQ8N5V2 710 aa26.83■■□□□ 1.89
PDXDC1-207ENST00000562119 MIS18AQ9NYP9 233 aa26.83■■□□□ 1.89
PDXDC1-207ENST00000562119 ERVV-1B6SEH8 477 aa26.82■■□□□ 1.88
PDXDC1-207ENST00000562119 RIC1Q4ADV7 1423 aa26.82■■□□□ 1.88
PDXDC1-207ENST00000562119 TCERG1O14776 1098 aaKnown RBP26.81■■□□□ 1.88
PDXDC1-207ENST00000562119 MAP2K2P36507 400 aa26.81■■□□□ 1.88
PDXDC1-207ENST00000562119 GRIPAP1Q4V328 841 aa26.81■■□□□ 1.88
PDXDC1-207ENST00000562119 UBN2Q6ZU65 1347 aa26.81■■□□□ 1.88
PDXDC1-207ENST00000562119 PPEF1O14829 653 aaPredicted RBP26.8■■□□□ 1.88
PDXDC1-207ENST00000562119 TTLL7Q6ZT98 887 aa26.8■■□□□ 1.88
PDXDC1-207ENST00000562119 NIM1KQ8IY84 436 aa26.8■■□□□ 1.88
PDXDC1-207ENST00000562119 CFAP53Q96M91 514 aa26.8■■□□□ 1.88
PDXDC1-207ENST00000562119 MAP3K15Q6ZN16 1313 aa26.8■■□□□ 1.88
PDXDC1-207ENST00000562119 U2AF1L5P0DN76 240 aaPredicted RBP26.79■■□□□ 1.88
PDXDC1-207ENST00000562119 GPTP24298 496 aa26.79■■□□□ 1.88
PDXDC1-207ENST00000562119 U2AF1Q01081 240 aaKnown RBP eCLIP26.79■■□□□ 1.88
PDXDC1-207ENST00000562119 TAF7Q15545 349 aaPredicted RBP26.79■■□□□ 1.88
PDXDC1-207ENST00000562119 SUSD4Q5VX71 490 aa26.79■■□□□ 1.88
PDXDC1-207ENST00000562119 C3orf67Q6ZVT6 689 aa26.79■■□□□ 1.88
PDXDC1-207ENST00000562119 SAPCD2Q86UD0 394 aa26.79■■□□□ 1.88
PDXDC1-207ENST00000562119 CRAMP1Q96RY5 1269 aa26.79■■□□□ 1.88
PDXDC1-207ENST00000562119 GPRC5DQ9NZD1 345 aa26.79■■□□□ 1.88
PDXDC1-207ENST00000562119 TRPM7Q96QT4 1865 aa26.79■■□□□ 1.88
PDXDC1-207ENST00000562119 HTATSF1O43719 755 aaKnown RBP26.78■■□□□ 1.88
PDXDC1-207ENST00000562119 RBM17Q96I25 401 aaKnown RBP26.78■■□□□ 1.88
PDXDC1-207ENST00000562119 ADARB2Q9NS39 739 aaKnown RBP26.78■■□□□ 1.88
PDXDC1-207ENST00000562119 NUDCQ9Y266 331 aa26.78■■□□□ 1.88
PDXDC1-207ENST00000562119 IBTKQ9P2D0 1353 aaPredicted RBP26.77■■□□□ 1.88
PDXDC1-207ENST00000562119 PPIP5K2O43314 1243 aa26.77■■□□□ 1.88
PDXDC1-207ENST00000562119 AOC3Q16853 763 aa26.77■■□□□ 1.88
PDXDC1-207ENST00000562119 LAMB4A4D0S4 1761 aa26.76■■□□□ 1.88
PDXDC1-207ENST00000562119 CELF2O95319 508 aaKnown RBP26.76■■□□□ 1.87
PDXDC1-207ENST00000562119 MCOLN1Q9GZU1 580 aa26.76■■□□□ 1.87
PDXDC1-207ENST00000562119 NUP98P52948 1817 aa26.75■■□□□ 1.87
PDXDC1-207ENST00000562119 NTSR2O95665 410 aa26.75■■□□□ 1.87
PDXDC1-207ENST00000562119 CXCL9Q07325 125 aa26.75■■□□□ 1.87
PDXDC1-207ENST00000562119 GLIS2Q9BZE0 524 aaPredicted RBP26.75■■□□□ 1.87
PDXDC1-207ENST00000562119 ZBTB3Q9H5J0 574 aa26.75■■□□□ 1.87
PDXDC1-207ENST00000562119 RRP7AQ9Y3A4 280 aaKnown RBP26.75■■□□□ 1.87
PDXDC1-207ENST00000562119 KIF6Q6ZMV9 814 aa26.74■■□□□ 1.87
PDXDC1-207ENST00000562119 ZNF34Q8IZ26 560 aa26.74■■□□□ 1.87
PDXDC1-207ENST00000562119 CA12O43570 354 aa26.73■■□□□ 1.87
PDXDC1-207ENST00000562119 TNRC18O15417 2968 aaPredicted RBP26.72■■□□□ 1.87
PDXDC1-207ENST00000562119 MYL6BP14649 208 aa26.72■■□□□ 1.87
PDXDC1-207ENST00000562119 GMPSP49915 693 aaPredicted RBP26.72■■□□□ 1.87
PDXDC1-207ENST00000562119 CCER1Q8TC90 406 aaPredicted RBP26.72■■□□□ 1.87
PDXDC1-207ENST00000562119 HHIPL1Q96JK4 782 aa26.72■■□□□ 1.87
PDXDC1-207ENST00000562119 PGAP2Q9UHJ9 254 aa26.72■■□□□ 1.87
PDXDC1-207ENST00000562119 ZNRF3Q9ULT6 936 aa26.72■■□□□ 1.87
PDXDC1-207ENST00000562119 ATP6V0A2Q9Y487 856 aa26.72■■□□□ 1.87
PDXDC1-207ENST00000562119 BRPF1P55201 1214 aaPredicted RBP26.71■■□□□ 1.87
PDXDC1-207ENST00000562119 CFAP44Q96MT7 982 aa26.71■■□□□ 1.87
PDXDC1-207ENST00000562119 VPS33BQ9H267 617 aa26.71■■□□□ 1.87
PDXDC1-207ENST00000562119 EIF4A1P60842 406 aaKnown RBP26.7■■□□□ 1.86
PDXDC1-207ENST00000562119 HIRAP54198 1017 aaPredicted RBP26.69■■□□□ 1.86
PDXDC1-207ENST00000562119 CIAPIN1Q6FI81 312 aa26.69■■□□□ 1.86
PDXDC1-207ENST00000562119 RTFDC1Q9BY42 306 aaPredicted RBP26.69■■□□□ 1.86
PDXDC1-207ENST00000562119 PPP2R1AP30153 589 aa26.68■■□□□ 1.86
PDXDC1-207ENST00000562119 ZIC5Q96T25 663 aa26.68■■□□□ 1.86
PDXDC1-207ENST00000562119 ZNF408Q9H9D4 720 aa26.68■■□□□ 1.86
PDXDC1-207ENST00000562119 KDM3BQ7LBC6 1761 aa26.67■■□□□ 1.86
PDXDC1-207ENST00000562119 DGKZQ13574 1117 aa26.67■■□□□ 1.86
PDXDC1-207ENST00000562119 GIGYF2Q6Y7W6 1299 aaKnown RBP26.67■■□□□ 1.86
PDXDC1-207ENST00000562119 NLRP3Q96P20 1036 aa26.67■■□□□ 1.86
PDXDC1-207ENST00000562119 CASP8AP2Q9UKL3 1982 aa26.67■■□□□ 1.86
PDXDC1-207ENST00000562119 ABCC4O15439 1325 aa26.66■■□□□ 1.86
PDXDC1-207ENST00000562119 TRPM4Q8TD43 1214 aa26.66■■□□□ 1.86
PDXDC1-207ENST00000562119 PNISRQ8TF01 805 aaKnown RBP26.66■■□□□ 1.86
PDXDC1-207ENST00000562119 ZC3H15Q8WU90 426 aaKnown RBP26.66■■□□□ 1.86
PDXDC1-207ENST00000562119 TMX4Q9H1E5 349 aaPredicted RBP26.66■■□□□ 1.86
PDXDC1-207ENST00000562119 PCDH10Q9P2E7 1040 aa26.66■■□□□ 1.86
PDXDC1-207ENST00000562119 RAD17O75943 681 aa26.65■■□□□ 1.86
PDXDC1-207ENST00000562119 SLC10A5Q5PT55 438 aa26.65■■□□□ 1.86
PDXDC1-207ENST00000562119 PPP1R42Q7Z4L9 355 aa26.65■■□□□ 1.86
PDXDC1-207ENST00000562119 SUPT20HQ8NEM7 779 aa26.65■■□□□ 1.86
PDXDC1-207ENST00000562119 CDHR2Q9BYE9 1310 aa26.65■■□□□ 1.86
PDXDC1-207ENST00000562119 SHTN1A0MZ66 631 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms