RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 ZNF34Q8IZ26 560 aa13.59□□□□□ -0.23
AC009054.2-201ENST00000561956 NARFQ9UHQ1 456 aa13.59□□□□□ -0.23
AC009054.2-201ENST00000561956 HDAC5Q9UQL6 1122 aa13.59□□□□□ -0.23
AC009054.2-201ENST00000561956 H7C1W4 665 aa13.58□□□□□ -0.24
AC009054.2-201ENST00000561956 SSFA2P28290 1259 aa13.58□□□□□ -0.24
AC009054.2-201ENST00000561956 CLEC4GQ6UXB4 293 aa13.58□□□□□ -0.24
AC009054.2-201ENST00000561956 NLRP10Q86W26 655 aa13.58□□□□□ -0.24
AC009054.2-201ENST00000561956 ARHGEF1Q92888 912 aaKnown RBP13.58□□□□□ -0.24
AC009054.2-201ENST00000561956 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
AC009054.2-201ENST00000561956 SUCLG2Q96I99 432 aa13.58□□□□□ -0.24
AC009054.2-201ENST00000561956 ZNF652Q9Y2D9 606 aa13.58□□□□□ -0.24
AC009054.2-201ENST00000561956 UBN2Q6ZU65 1347 aa13.58□□□□□ -0.24
AC009054.2-201ENST00000561956 COL24A1Q17RW2 1714 aa13.57□□□□□ -0.24
AC009054.2-201ENST00000561956 GPTP24298 496 aa13.57□□□□□ -0.24
AC009054.2-201ENST00000561956 BAG6P46379 1132 aa13.57□□□□□ -0.24
AC009054.2-201ENST00000561956 SF3B2Q13435 895 aaKnown RBP13.57□□□□□ -0.24
AC009054.2-201ENST00000561956 EZH2Q15910 746 aaKnown RBP13.57□□□□□ -0.24
AC009054.2-201ENST00000561956 ZNF827Q17R98 1081 aa13.57□□□□□ -0.24
AC009054.2-201ENST00000561956 TRAPPC3LQ5T215 181 aa13.57□□□□□ -0.24
AC009054.2-201ENST00000561956 UBE3BQ7Z3V4 1068 aa13.57□□□□□ -0.24
AC009054.2-201ENST00000561956 KAZALD1Q96I82 304 aa13.57□□□□□ -0.24
AC009054.2-201ENST00000561956 BCL2L12Q9HB09 334 aa13.57□□□□□ -0.24
AC009054.2-201ENST00000561956 SRP68Q9UHB9 627 aaKnown RBP13.57□□□□□ -0.24
AC009054.2-201ENST00000561956 USP42Q9H9J4 1324 aaKnown RBP13.57□□□□□ -0.24
AC009054.2-201ENST00000561956 QSER1Q2KHR3 1735 aa13.56□□□□□ -0.24
AC009054.2-201ENST00000561956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.56□□□□□ -0.24
AC009054.2-201ENST00000561956 ZPR1O75312 459 aa13.56□□□□□ -0.24
AC009054.2-201ENST00000561956 PHF14O94880 888 aa13.56□□□□□ -0.24
AC009054.2-201ENST00000561956 PCCAP05165 728 aaPredicted RBP13.56□□□□□ -0.24
AC009054.2-201ENST00000561956 ATP8B2P98198 1209 aa13.56□□□□□ -0.24
AC009054.2-201ENST00000561956 EN1Q05925 392 aaPredicted RBP13.56□□□□□ -0.24
AC009054.2-201ENST00000561956 MTX1Q13505 466 aa13.56□□□□□ -0.24
AC009054.2-201ENST00000561956 USPL1Q5W0Q7 1092 aa13.56□□□□□ -0.24
AC009054.2-201ENST00000561956 HMMRO75330 724 aa13.55□□□□□ -0.24
AC009054.2-201ENST00000561956 RFC4P35249 363 aa13.55□□□□□ -0.24
AC009054.2-201ENST00000561956 PARP10Q53GL7 1025 aa13.55□□□□□ -0.24
AC009054.2-201ENST00000561956 CCDC125Q86Z20 511 aa13.55□□□□□ -0.24
AC009054.2-201ENST00000561956 SMC5Q8IY18 1101 aa13.55□□□□□ -0.24
AC009054.2-201ENST00000561956 ZBTB38Q8NAP3 1195 aaPredicted RBP13.55□□□□□ -0.24
AC009054.2-201ENST00000561956 JARID2Q92833 1246 aaPredicted RBP13.55□□□□□ -0.24
AC009054.2-201ENST00000561956 BICC1Q9H694 974 aaKnown RBP13.55□□□□□ -0.24
AC009054.2-201ENST00000561956 LAMB2P55268 1798 aa13.55□□□□□ -0.24
AC009054.2-201ENST00000561956 PNMA6EA0A0J9YXQ4 647 aa13.54□□□□□ -0.24
AC009054.2-201ENST00000561956 POLA2Q14181 598 aa13.54□□□□□ -0.24
AC009054.2-201ENST00000561956 EPHA10Q5JZY3 1008 aa13.54□□□□□ -0.24
AC009054.2-201ENST00000561956 DEFB132Q7Z7B7 95 aa13.54□□□□□ -0.24
AC009054.2-201ENST00000561956 SSH3Q8TE77 659 aa13.54□□□□□ -0.24
AC009054.2-201ENST00000561956 NIP7Q9Y221 180 aaKnown RBP eCLIP13.54□□□□□ -0.24
AC009054.2-201ENST00000561956 CDHR2Q9BYE9 1310 aa13.54□□□□□ -0.24
AC009054.2-201ENST00000561956 RABL6Q3YEC7 729 aaPredicted RBP13.53□□□□□ -0.24
AC009054.2-201ENST00000561956 SUSD4Q5VX71 490 aa13.53□□□□□ -0.24
AC009054.2-201ENST00000561956 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
AC009054.2-201ENST00000561956 GCC1Q96CN9 775 aa13.53□□□□□ -0.24
AC009054.2-201ENST00000561956 TFCP2L1Q9NZI6 479 aa13.53□□□□□ -0.24
AC009054.2-201ENST00000561956 MYH3P11055 1940 aa13.52□□□□□ -0.24
AC009054.2-201ENST00000561956 SRGAP3O43295 1099 aa13.52□□□□□ -0.25
AC009054.2-201ENST00000561956 NTSR2O95665 410 aa13.52□□□□□ -0.25
AC009054.2-201ENST00000561956 FOXO4P98177 505 aa13.52□□□□□ -0.25
AC009054.2-201ENST00000561956 TBC1D9BQ66K14 1250 aa13.52□□□□□ -0.25
AC009054.2-201ENST00000561956 FLAD1Q8NFF5 587 aa13.52□□□□□ -0.25
AC009054.2-201ENST00000561956 FAM89AQ96GI7 184 aa13.52□□□□□ -0.25
AC009054.2-201ENST00000561956 UTP14AQ9BVJ6 771 aaKnown RBP13.52□□□□□ -0.25
AC009054.2-201ENST00000561956 PLA2G12BQ9BX93 195 aa13.52□□□□□ -0.25
AC009054.2-201ENST00000561956 DCTPP1Q9H773 170 aa13.52□□□□□ -0.25
AC009054.2-201ENST00000561956 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.25
AC009054.2-201ENST00000561956 TRMT112Q9UI30 125 aaKnown RBP13.52□□□□□ -0.25
AC009054.2-201ENST00000561956 DDX60Q8IY21 1712 aaKnown RBP13.52□□□□□ -0.25
AC009054.2-201ENST00000561956 PNPLA7Q6ZV29 1317 aa13.51□□□□□ -0.25
AC009054.2-201ENST00000561956 SH3TC1Q8TE82 1336 aa13.51□□□□□ -0.25
AC009054.2-201ENST00000561956 GYS1P13807 737 aa13.51□□□□□ -0.25
AC009054.2-201ENST00000561956 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
AC009054.2-201ENST00000561956 STK32BQ9NY57 414 aa13.51□□□□□ -0.25
AC009054.2-201ENST00000561956 SLC15A2Q16348 729 aa13.5□□□□□ -0.25
AC009054.2-201ENST00000561956 COL23A1Q86Y22 540 aaPredicted RBP13.5□□□□□ -0.25
AC009054.2-201ENST00000561956 SYNE4Q8N205 404 aa13.5□□□□□ -0.25
AC009054.2-201ENST00000561956 CARMIL3Q8ND23 1372 aa13.49□□□□□ -0.25
AC009054.2-201ENST00000561956 IRS4O14654 1257 aaPredicted RBP13.49□□□□□ -0.25
AC009054.2-201ENST00000561956 NFIXQ14938 502 aa13.49□□□□□ -0.25
AC009054.2-201ENST00000561956 LMBR1LQ6UX01 489 aa13.49□□□□□ -0.25
AC009054.2-201ENST00000561956 BICDL1Q6ZP65 573 aa13.49□□□□□ -0.25
AC009054.2-201ENST00000561956 SETDB2Q96T68 719 aa13.49□□□□□ -0.25
AC009054.2-201ENST00000561956 PDZRN3Q9UPQ7 1066 aa13.49□□□□□ -0.25
AC009054.2-201ENST00000561956 CASZ1Q86V15 1759 aa13.48□□□□□ -0.25
AC009054.2-201ENST00000561956 FAM177BA6PVY3 158 aa13.48□□□□□ -0.25
AC009054.2-201ENST00000561956 PDE8AO60658 829 aa13.48□□□□□ -0.25
AC009054.2-201ENST00000561956 RFX5P48382 616 aaPredicted RBP13.48□□□□□ -0.25
AC009054.2-201ENST00000561956 NUCB1Q02818 461 aa13.48□□□□□ -0.25
AC009054.2-201ENST00000561956 NYXQ9GZU5 481 aa13.48□□□□□ -0.25
AC009054.2-201ENST00000561956 NOP58Q9Y2X3 529 aaKnown RBP13.48□□□□□ -0.25
AC009054.2-201ENST00000561956 ABCC12Q96J65 1359 aa13.47□□□□□ -0.25
AC009054.2-201ENST00000561956 CSF1RP07333 972 aa13.47□□□□□ -0.25
AC009054.2-201ENST00000561956 HSP90B1P14625 803 aaKnown RBP13.47□□□□□ -0.25
AC009054.2-201ENST00000561956 CTSWP56202 376 aa13.47□□□□□ -0.25
AC009054.2-201ENST00000561956 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
AC009054.2-201ENST00000561956 EXOC6BQ9Y2D4 811 aa13.47□□□□□ -0.25
AC009054.2-201ENST00000561956 SURF6O75683 361 aaKnown RBP13.46□□□□□ -0.25
AC009054.2-201ENST00000561956 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
AC009054.2-201ENST00000561956 TM4SF1P30408 202 aa13.46□□□□□ -0.25
AC009054.2-201ENST00000561956 ERFEQ4G0M1 354 aa13.46□□□□□ -0.25
AC009054.2-201ENST00000561956 CHD1LQ86WJ1 897 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms