RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 USP44Q9H0E7 712 aa15.96■□□□□ 0.15
CMTM4-203ENST00000561680 CHMP4BQ9H444 224 aaKnown RBP15.96■□□□□ 0.15
CMTM4-203ENST00000561680 CWC25Q9NXE8 425 aaPredicted RBP15.96■□□□□ 0.15
CMTM4-203ENST00000561680 GRM8O00222 908 aa15.95■□□□□ 0.14
CMTM4-203ENST00000561680 GPTP24298 496 aa15.95■□□□□ 0.14
CMTM4-203ENST00000561680 AAMPQ13685 434 aa15.95■□□□□ 0.14
CMTM4-203ENST00000561680 ERICH6BQ5W0A0 696 aa15.95■□□□□ 0.14
CMTM4-203ENST00000561680 TBC1D9BQ66K14 1250 aa15.95■□□□□ 0.14
CMTM4-203ENST00000561680 ZBTB40Q9NUA8 1239 aa15.95■□□□□ 0.14
CMTM4-203ENST00000561680 TNRC6CQ9HCJ0 1690 aaKnown RBP15.95■□□□□ 0.14
CMTM4-203ENST00000561680 KIF13BQ9NQT8 1826 aa15.94■□□□□ 0.14
CMTM4-203ENST00000561680 GNAI3P08754 354 aa15.94■□□□□ 0.14
CMTM4-203ENST00000561680 PARP10Q53GL7 1025 aa15.94■□□□□ 0.14
CMTM4-203ENST00000561680 NIP7Q9Y221 180 aaKnown RBP eCLIP15.94■□□□□ 0.14
CMTM4-203ENST00000561680 TAF1P21675 1872 aa15.93■□□□□ 0.14
CMTM4-203ENST00000561680 CARMIL3Q8ND23 1372 aa15.93■□□□□ 0.14
CMTM4-203ENST00000561680 C9orf78Q9NZ63 289 aaPredicted RBP15.93■□□□□ 0.14
CMTM4-203ENST00000561680 MSH5O43196 834 aa15.92■□□□□ 0.14
CMTM4-203ENST00000561680 PCCAP05165 728 aaPredicted RBP15.92■□□□□ 0.14
CMTM4-203ENST00000561680 NBPF7P0C2Y1 421 aaPredicted RBP15.92■□□□□ 0.14
CMTM4-203ENST00000561680 UBTFL1P0CB47 393 aaPredicted RBP15.92■□□□□ 0.14
CMTM4-203ENST00000561680 CASP7P55210 303 aa15.92■□□□□ 0.14
CMTM4-203ENST00000561680 CACNA1SQ13698 1873 aa15.92■□□□□ 0.14
CMTM4-203ENST00000561680 H7C1W4 665 aa15.91■□□□□ 0.14
CMTM4-203ENST00000561680 NTSR2O95665 410 aa15.91■□□□□ 0.14
CMTM4-203ENST00000561680 NFIXQ14938 502 aa15.91■□□□□ 0.14
CMTM4-203ENST00000561680 UBE3BQ7Z3V4 1068 aa15.91■□□□□ 0.14
CMTM4-203ENST00000561680 ZBTB38Q8NAP3 1195 aaPredicted RBP15.91■□□□□ 0.14
CMTM4-203ENST00000561680 SETDB2Q96T68 719 aa15.91■□□□□ 0.14
CMTM4-203ENST00000561680 CDHR2Q9BYE9 1310 aa15.91■□□□□ 0.14
CMTM4-203ENST00000561680 A0A1B0GUL6 1792 aa15.9■□□□□ 0.14
CMTM4-203ENST00000561680 DLEC1Q9Y238 1755 aa15.9■□□□□ 0.14
CMTM4-203ENST00000561680 TM4SF1P30408 202 aa15.9■□□□□ 0.14
CMTM4-203ENST00000561680 SUSD4Q5VX71 490 aa15.9■□□□□ 0.14
CMTM4-203ENST00000561680 BICDL1Q6ZP65 573 aa15.9■□□□□ 0.14
CMTM4-203ENST00000561680 PPP1R42Q7Z4L9 355 aa15.9■□□□□ 0.14
CMTM4-203ENST00000561680 NLGN1Q8N2Q7 840 aa15.9■□□□□ 0.14
CMTM4-203ENST00000561680 UTP14AQ9BVJ6 771 aaKnown RBP15.9■□□□□ 0.14
CMTM4-203ENST00000561680 COL11A2P13942 1736 aaPredicted RBP15.9■□□□□ 0.14
CMTM4-203ENST00000561680 RIC1Q4ADV7 1423 aa15.89■□□□□ 0.13
CMTM4-203ENST00000561680 GNAI2P04899 355 aa15.89■□□□□ 0.13
CMTM4-203ENST00000561680 PDGFDQ9GZP0 370 aaPredicted RBP15.89■□□□□ 0.13
CMTM4-203ENST00000561680 C1orf115Q9H7X2 142 aa15.89■□□□□ 0.13
CMTM4-203ENST00000561680 TRMT112Q9UI30 125 aaKnown RBP15.89■□□□□ 0.13
CMTM4-203ENST00000561680 HDAC5Q9UQL6 1122 aa15.89■□□□□ 0.13
CMTM4-203ENST00000561680 LRRFIP2Q9Y608 721 aaKnown RBP15.89■□□□□ 0.13
CMTM4-203ENST00000561680 SH3TC1Q8TE82 1336 aa15.89■□□□□ 0.13
CMTM4-203ENST00000561680 DDR1Q08345 913 aa15.88■□□□□ 0.13
CMTM4-203ENST00000561680 SLC16A10Q8TF71 515 aa15.88■□□□□ 0.13
CMTM4-203ENST00000561680 FAM89AQ96GI7 184 aa15.88■□□□□ 0.13
CMTM4-203ENST00000561680 KAZALD1Q96I82 304 aa15.88■□□□□ 0.13
CMTM4-203ENST00000561680 SUCLG2Q96I99 432 aa15.88■□□□□ 0.13
CMTM4-203ENST00000561680 NYXQ9GZU5 481 aa15.88■□□□□ 0.13
CMTM4-203ENST00000561680 GTF3C3Q9Y5Q9 886 aa15.88■□□□□ 0.13
CMTM4-203ENST00000561680 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
CMTM4-203ENST00000561680 POLRMTO00411 1230 aaKnown RBP15.87■□□□□ 0.13
CMTM4-203ENST00000561680 R3HDM1Q15032 1099 aaKnown RBP15.87■□□□□ 0.13
CMTM4-203ENST00000561680 NBPF5PQ86XG9 351 aaPredicted RBP15.87■□□□□ 0.13
CMTM4-203ENST00000561680 JARID2Q92833 1246 aaPredicted RBP15.87■□□□□ 0.13
CMTM4-203ENST00000561680 PLA2G12BQ9BX93 195 aa15.87■□□□□ 0.13
CMTM4-203ENST00000561680 PCDHB15Q9Y5E8 787 aa15.87■□□□□ 0.13
CMTM4-203ENST00000561680 FAM177BA6PVY3 158 aa15.86■□□□□ 0.13
CMTM4-203ENST00000561680 RTL5Q5HYW3 569 aaPredicted RBP15.86■□□□□ 0.13
CMTM4-203ENST00000561680 MSL1Q68DK7 614 aa15.86■□□□□ 0.13
CMTM4-203ENST00000561680 SYNE4Q8N205 404 aa15.86■□□□□ 0.13
CMTM4-203ENST00000561680 KIAA1551Q9HCM1 1747 aa15.85■□□□□ 0.13
CMTM4-203ENST00000561680 BRCA1P38398 1863 aaKnown RBP15.85■□□□□ 0.13
CMTM4-203ENST00000561680 MMP10P09238 476 aa15.85■□□□□ 0.13
CMTM4-203ENST00000561680 CEP85Q6P2H3 762 aa15.85■□□□□ 0.13
CMTM4-203ENST00000561680 NUTM1Q86Y26 1132 aa15.85■□□□□ 0.13
CMTM4-203ENST00000561680 ANKRD44Q8N8A2 993 aa15.85■□□□□ 0.13
CMTM4-203ENST00000561680 BICC1Q9H694 974 aaKnown RBP15.85■□□□□ 0.13
CMTM4-203ENST00000561680 PPP4R2Q9NY27 417 aa15.85■□□□□ 0.13
CMTM4-203ENST00000561680 LRP5O75197 1615 aa15.85■□□□□ 0.13
CMTM4-203ENST00000561680 IRS4O14654 1257 aaPredicted RBP15.84■□□□□ 0.13
CMTM4-203ENST00000561680 SERPINB2P05120 415 aa15.84■□□□□ 0.13
CMTM4-203ENST00000561680 FOXO4P98177 505 aa15.84■□□□□ 0.13
CMTM4-203ENST00000561680 MTX1Q13505 466 aa15.84■□□□□ 0.13
CMTM4-203ENST00000561680 RABL6Q3YEC7 729 aaPredicted RBP15.84■□□□□ 0.13
CMTM4-203ENST00000561680 ERFEQ4G0M1 354 aa15.84■□□□□ 0.13
CMTM4-203ENST00000561680 EPHA10Q5JZY3 1008 aa15.84■□□□□ 0.13
CMTM4-203ENST00000561680 TPTE2Q6XPS3 522 aa15.84■□□□□ 0.13
CMTM4-203ENST00000561680 RPAP2Q8IXW5 612 aaPredicted RBP15.84■□□□□ 0.13
CMTM4-203ENST00000561680 CNBD1Q8NA66 436 aa15.84■□□□□ 0.13
CMTM4-203ENST00000561680 PDE8AO60658 829 aa15.83■□□□□ 0.12
CMTM4-203ENST00000561680 HSP90B1P14625 803 aaKnown RBP15.83■□□□□ 0.12
CMTM4-203ENST00000561680 SLC10A5Q5PT55 438 aa15.83■□□□□ 0.12
CMTM4-203ENST00000561680 PRR5LQ6MZQ0 368 aa15.83■□□□□ 0.12
CMTM4-203ENST00000561680 SIRT2Q8IXJ6 389 aa15.83■□□□□ 0.12
CMTM4-203ENST00000561680 PARP3Q9Y6F1 533 aa15.83■□□□□ 0.12
CMTM4-203ENST00000561680 PSDA5PKW4 1024 aaPredicted RBP15.82■□□□□ 0.12
CMTM4-203ENST00000561680 CTSWP56202 376 aa15.82■□□□□ 0.12
CMTM4-203ENST00000561680 ATP8B2P98198 1209 aa15.82■□□□□ 0.12
CMTM4-203ENST00000561680 MTFR1LQ9H019 292 aa15.82■□□□□ 0.12
CMTM4-203ENST00000561680 COL4A1P02462 1669 aa15.82■□□□□ 0.12
CMTM4-203ENST00000561680 PNMA6EA0A0J9YXQ4 647 aa15.81■□□□□ 0.12
CMTM4-203ENST00000561680 HCLS1P14317 486 aaPredicted RBP15.81■□□□□ 0.12
CMTM4-203ENST00000561680 GTF2E1P29083 439 aaPredicted RBP15.81■□□□□ 0.12
CMTM4-203ENST00000561680 ST5P78524 1137 aa15.81■□□□□ 0.12
CMTM4-203ENST00000561680 HDAC1Q13547 482 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms