RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 ZC3H6P61129 1189 aaKnown RBP13.13□□□□□ -0.31
NEIL1-202ENST00000561643 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
NEIL1-202ENST00000561643 CCDC8Q9H0W5 538 aaPredicted RBP13.13□□□□□ -0.31
NEIL1-202ENST00000561643 SIL1Q9H173 461 aa13.13□□□□□ -0.31
NEIL1-202ENST00000561643 PDRG1Q9NUG6 133 aa13.13□□□□□ -0.31
NEIL1-202ENST00000561643 SYT1P21579 422 aa13.13□□□□□ -0.31
NEIL1-202ENST00000561643 HS1BP3Q53T59 392 aa13.13□□□□□ -0.31
NEIL1-202ENST00000561643 SASS6Q6UVJ0 657 aa13.13□□□□□ -0.31
NEIL1-202ENST00000561643 RAPGEF4Q8WZA2 1011 aa13.13□□□□□ -0.31
NEIL1-202ENST00000561643 CYP46A1Q9Y6A2 500 aa13.13□□□□□ -0.31
NEIL1-202ENST00000561643 MYL6BP14649 208 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 ZKSCAN1P17029 563 aaPredicted RBP13.12□□□□□ -0.31
NEIL1-202ENST00000561643 CBX1P83916 185 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 UTP14CQ5TAP6 766 aaKnown RBP13.12□□□□□ -0.31
NEIL1-202ENST00000561643 CCDC83Q8IWF9 413 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 ZKSCAN5Q9Y2L8 839 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 SLIT3O75094 1523 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 SASH1O94885 1247 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 ADCK5Q3MIX3 580 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 IPO4Q8TEX9 1081 aaKnown RBP13.12□□□□□ -0.31
NEIL1-202ENST00000561643 EAF2Q96CJ1 260 aaPredicted RBP13.12□□□□□ -0.31
NEIL1-202ENST00000561643 KAZALD1Q96I82 304 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 CNPY2Q9Y2B0 182 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 IGSF3O75054 1194 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 DDX54Q8TDD1 881 aaKnown RBP13.12□□□□□ -0.31
NEIL1-202ENST00000561643 NLRP2Q9NX02 1062 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 CCDC171Q6TFL3 1326 aa13.12□□□□□ -0.31
NEIL1-202ENST00000561643 NPHP4O75161 1426 aaPredicted RBP13.11□□□□□ -0.31
NEIL1-202ENST00000561643 LARGE1O95461 756 aa13.11□□□□□ -0.31
NEIL1-202ENST00000561643 VPS53Q5VIR6 699 aa13.11□□□□□ -0.31
NEIL1-202ENST00000561643 ZNF790Q6PG37 636 aa13.11□□□□□ -0.31
NEIL1-202ENST00000561643 LARP1Q6PKG0 1096 aaKnown RBP13.11□□□□□ -0.31
NEIL1-202ENST00000561643 HIP1O00291 1037 aa13.11□□□□□ -0.31
NEIL1-202ENST00000561643 PROSER2Q86WR7 435 aaPredicted RBP13.11□□□□□ -0.31
NEIL1-202ENST00000561643 FAM227BQ96M60 508 aa13.11□□□□□ -0.31
NEIL1-202ENST00000561643 ATP6V1DQ9Y5K8 247 aa13.11□□□□□ -0.31
NEIL1-202ENST00000561643 ERBB3P21860 1342 aa13.11□□□□□ -0.31
NEIL1-202ENST00000561643 NMIQ13287 307 aaPredicted RBP13.1□□□□□ -0.31
NEIL1-202ENST00000561643 PDIA6Q15084 440 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 CSPP1Q1MSJ5 1256 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 FSD1Q9BTV5 496 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 BOLA2Q9H3K6 86 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 RBM8AQ9Y5S9 174 aaKnown RBP13.1□□□□□ -0.31
NEIL1-202ENST00000561643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.1□□□□□ -0.31
NEIL1-202ENST00000561643 UTYO14607 1347 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 FIBPO43427 364 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 F13A1P00488 732 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 IGKV5-2P06315 115 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 GJB2P29033 226 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 PPP4R3BQ5MIZ7 849 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 KLHDC4Q8TBB5 520 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 ZSCAN31Q96LW9 406 aaPredicted RBP13.1□□□□□ -0.31
NEIL1-202ENST00000561643 TM6SF1Q9BZW5 370 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 ZSWIM6Q9HCJ5 1215 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 TLR7Q9NYK1 1049 aaKnown RBP13.1□□□□□ -0.31
NEIL1-202ENST00000561643 CRYBG1Q9Y4K1 1723 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 DTNBO60941 627 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 TMEM87AQ8NBN3 555 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 XAGE3Q8WTP9 111 aa13.1□□□□□ -0.31
NEIL1-202ENST00000561643 SH2B1Q9NRF2 756 aaPredicted RBP13.1□□□□□ -0.31
NEIL1-202ENST00000561643 NECTIN1Q15223 517 aa13.09□□□□□ -0.31
NEIL1-202ENST00000561643 CREB3L3Q68CJ9 461 aa13.09□□□□□ -0.31
NEIL1-202ENST00000561643 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
NEIL1-202ENST00000561643 MYD88Q99836 296 aa13.09□□□□□ -0.31
NEIL1-202ENST00000561643 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
NEIL1-202ENST00000561643 TMEM51Q9NW97 253 aa13.09□□□□□ -0.31
NEIL1-202ENST00000561643 COPS6Q7L5N1 327 aa13.09□□□□□ -0.31
NEIL1-202ENST00000561643 NPHP3Q7Z494 1330 aa13.09□□□□□ -0.31
NEIL1-202ENST00000561643 FAM177BA6PVY3 158 aa13.08□□□□□ -0.31
NEIL1-202ENST00000561643 NEURL1BA8MQ27 555 aa13.08□□□□□ -0.31
NEIL1-202ENST00000561643 TATP17735 454 aaPredicted RBP13.08□□□□□ -0.31
NEIL1-202ENST00000561643 CCDC183Q5T5S1 534 aa13.08□□□□□ -0.31
NEIL1-202ENST00000561643 DNTTIP2Q5QJE6 756 aaKnown RBP13.08□□□□□ -0.32
NEIL1-202ENST00000561643 CERS3Q8IU89 383 aa13.08□□□□□ -0.32
NEIL1-202ENST00000561643 ZFP91Q96JP5 570 aaPredicted RBP13.08□□□□□ -0.32
NEIL1-202ENST00000561643 CCDC39Q9UFE4 941 aa13.08□□□□□ -0.32
NEIL1-202ENST00000561643 VPS37CA5D8V6 355 aaPredicted RBP13.08□□□□□ -0.32
NEIL1-202ENST00000561643 PTMAP06454 111 aaKnown RBP13.08□□□□□ -0.32
NEIL1-202ENST00000561643 CSB-PGBD3P0DP91 1061 aa13.08□□□□□ -0.32
NEIL1-202ENST00000561643 UBE2HP62256 183 aa13.08□□□□□ -0.32
NEIL1-202ENST00000561643 GCKRQ14397 625 aa13.08□□□□□ -0.32
NEIL1-202ENST00000561643 KCNB2Q92953 911 aa13.08□□□□□ -0.32
NEIL1-202ENST00000561643 ZNF142P52746 1687 aaPredicted RBP13.07□□□□□ -0.32
NEIL1-202ENST00000561643 PSMA5P28066 241 aa13.07□□□□□ -0.32
NEIL1-202ENST00000561643 MPNDQ8N594 471 aa13.07□□□□□ -0.32
NEIL1-202ENST00000561643 NECAB1Q8N987 351 aa13.07□□□□□ -0.32
NEIL1-202ENST00000561643 MAP4K1Q92918 833 aa13.07□□□□□ -0.32
NEIL1-202ENST00000561643 A0A0D9SFI3 127 aa13.07□□□□□ -0.32
NEIL1-202ENST00000561643 ME3Q16798 604 aa13.07□□□□□ -0.32
NEIL1-202ENST00000561643 TTC5Q8N0Z6 440 aa13.07□□□□□ -0.32
NEIL1-202ENST00000561643 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
NEIL1-202ENST00000561643 METTL22Q9BUU2 404 aaPredicted RBP13.07□□□□□ -0.32
NEIL1-202ENST00000561643 SLC27A2O14975 620 aa13.07□□□□□ -0.32
NEIL1-202ENST00000561643 PHKG2P15735 406 aa13.07□□□□□ -0.32
NEIL1-202ENST00000561643 PIP4K2AP48426 406 aaPredicted RBP13.07□□□□□ -0.32
NEIL1-202ENST00000561643 RNF20Q5VTR2 975 aa13.07□□□□□ -0.32
NEIL1-202ENST00000561643 MTMR6Q9Y217 621 aa13.07□□□□□ -0.32
NEIL1-202ENST00000561643 TCHHQ07283 1943 aa13.06□□□□□ -0.32
NEIL1-202ENST00000561643 EPHA10Q5JZY3 1008 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms