RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 MYH3P11055 1940 aa22.37■■□□□ 1.17
CDC42BPB-208ENST00000561271 ANP32CO43423 234 aa22.36■■□□□ 1.17
CDC42BPB-208ENST00000561271 GNAI1P63096 354 aa22.36■■□□□ 1.17
CDC42BPB-208ENST00000561271 CALD1Q05682 793 aaKnown RBP22.36■■□□□ 1.17
CDC42BPB-208ENST00000561271 PARP10Q53GL7 1025 aa22.36■■□□□ 1.17
CDC42BPB-208ENST00000561271 CCDC93Q567U6 631 aa22.36■■□□□ 1.17
CDC42BPB-208ENST00000561271 C7orf43Q8WVR3 580 aa22.36■■□□□ 1.17
CDC42BPB-208ENST00000561271 TOMM70O94826 608 aa22.35■■□□□ 1.17
CDC42BPB-208ENST00000561271 PPP1R42Q7Z4L9 355 aa22.35■■□□□ 1.17
CDC42BPB-208ENST00000561271 SNED1Q8TER0 1413 aa22.34■■□□□ 1.17
CDC42BPB-208ENST00000561271 C3orf67Q6ZVT6 689 aa22.34■■□□□ 1.17
CDC42BPB-208ENST00000561271 RPGRQ92834 1020 aaKnown RBP22.34■■□□□ 1.17
CDC42BPB-208ENST00000561271 RRAGCQ9HB90 399 aa22.34■■□□□ 1.17
CDC42BPB-208ENST00000561271 LRRC37AA6NMS7 1700 aa22.34■■□□□ 1.17
CDC42BPB-208ENST00000561271 GLTPD2A6NH11 291 aa22.33■■□□□ 1.17
CDC42BPB-208ENST00000561271 HSPA6P17066 643 aa22.33■■□□□ 1.17
CDC42BPB-208ENST00000561271 HSP90AB3PQ58FF7 597 aa22.33■■□□□ 1.17
CDC42BPB-208ENST00000561271 UTP14AQ9BVJ6 771 aaKnown RBP22.33■■□□□ 1.17
CDC42BPB-208ENST00000561271 DBF4Q9UBU7 674 aaPredicted RBP22.33■■□□□ 1.17
CDC42BPB-208ENST00000561271 SPEF2Q9C093 1822 aa22.33■■□□□ 1.16
CDC42BPB-208ENST00000561271 ALDH1B1P30837 517 aa22.32■■□□□ 1.16
CDC42BPB-208ENST00000561271 NLRP10Q86W26 655 aa22.32■■□□□ 1.16
CDC42BPB-208ENST00000561271 C16orf71Q8IYS4 520 aaPredicted RBP22.32■■□□□ 1.16
CDC42BPB-208ENST00000561271 ZNF428Q96B54 188 aa22.32■■□□□ 1.16
CDC42BPB-208ENST00000561271 ELL2O00472 640 aaPredicted RBP22.31■■□□□ 1.16
CDC42BPB-208ENST00000561271 FKBP4Q02790 459 aaKnown RBP eCLIP22.3■■□□□ 1.16
CDC42BPB-208ENST00000561271 TCIRG1Q13488 830 aa22.3■■□□□ 1.16
CDC42BPB-208ENST00000561271 SLC51AQ86UW1 340 aa22.3■■□□□ 1.16
CDC42BPB-208ENST00000561271 RNF123Q5XPI4 1314 aa22.3■■□□□ 1.16
CDC42BPB-208ENST00000561271 COL4A5P29400 1685 aa22.3■■□□□ 1.16
CDC42BPB-208ENST00000561271 HOXA10P31260 410 aaPredicted RBP22.29■■□□□ 1.16
CDC42BPB-208ENST00000561271 C8orf58Q8NAV2 365 aa22.29■■□□□ 1.16
CDC42BPB-208ENST00000561271 PLBD2Q8NHP8 589 aa22.29■■□□□ 1.16
CDC42BPB-208ENST00000561271 RBM46Q8TBY0 533 aaKnown RBP22.29■■□□□ 1.16
CDC42BPB-208ENST00000561271 TSR2Q969E8 191 aaKnown RBP22.29■■□□□ 1.16
CDC42BPB-208ENST00000561271 ZNF277Q9NRM2 450 aaPredicted RBP22.29■■□□□ 1.16
CDC42BPB-208ENST00000561271 HYPKQ9NX55 129 aa22.29■■□□□ 1.16
CDC42BPB-208ENST00000561271 COL4A1P02462 1669 aa22.28■■□□□ 1.16
CDC42BPB-208ENST00000561271 SYNE4Q8N205 404 aa22.28■■□□□ 1.16
CDC42BPB-208ENST00000561271 ANKRD13DQ6ZTN6 518 aa22.27■■□□□ 1.16
CDC42BPB-208ENST00000561271 RTKN2Q8IZC4 609 aa22.27■■□□□ 1.16
CDC42BPB-208ENST00000561271 RBM17Q96I25 401 aaKnown RBP22.27■■□□□ 1.16
CDC42BPB-208ENST00000561271 NLRP3Q96P20 1036 aa22.27■■□□□ 1.16
CDC42BPB-208ENST00000561271 TRMT112Q9UI30 125 aaKnown RBP22.27■■□□□ 1.16
CDC42BPB-208ENST00000561271 PPEF1O14829 653 aaPredicted RBP22.26■■□□□ 1.15
CDC42BPB-208ENST00000561271 HCLS1P14317 486 aaPredicted RBP22.26■■□□□ 1.15
CDC42BPB-208ENST00000561271 CCDC27Q2M243 656 aa22.26■■□□□ 1.15
CDC42BPB-208ENST00000561271 WWC1Q8IX03 1113 aa22.26■■□□□ 1.15
CDC42BPB-208ENST00000561271 CRAMP1Q96RY5 1269 aa22.26■■□□□ 1.15
CDC42BPB-208ENST00000561271 ABCC4O15439 1325 aa22.26■■□□□ 1.15
CDC42BPB-208ENST00000561271 SH3TC1Q8TE82 1336 aa22.26■■□□□ 1.15
CDC42BPB-208ENST00000561271 ATP5J2-PTCD1G3V325 749 aa22.25■■□□□ 1.15
CDC42BPB-208ENST00000561271 TCERG1O14776 1098 aaKnown RBP22.25■■□□□ 1.15
CDC42BPB-208ENST00000561271 VEGFAP15692 232 aaPredicted RBP22.25■■□□□ 1.15
CDC42BPB-208ENST00000561271 SLC10A5Q5PT55 438 aa22.25■■□□□ 1.15
CDC42BPB-208ENST00000561271 DPY19L2Q6NUT2 758 aa22.25■■□□□ 1.15
CDC42BPB-208ENST00000561271 TSPYL6Q8N831 410 aa22.25■■□□□ 1.15
CDC42BPB-208ENST00000561271 PHAXQ9H814 394 aaKnown RBP22.25■■□□□ 1.15
CDC42BPB-208ENST00000561271 ISCA1Q9BUE6 129 aa22.24■■□□□ 1.15
CDC42BPB-208ENST00000561271 LTBP1Q14766 1721 aa22.23■■□□□ 1.15
CDC42BPB-208ENST00000561271 POTECB2RU33 542 aa22.23■■□□□ 1.15
CDC42BPB-208ENST00000561271 DDNO94850 711 aaPredicted RBP22.23■■□□□ 1.15
CDC42BPB-208ENST00000561271 IARSP41252 1262 aaKnown RBP22.23■■□□□ 1.15
CDC42BPB-208ENST00000561271 GOLGA2Q08379 1002 aa22.23■■□□□ 1.15
CDC42BPB-208ENST00000561271 ZNF541Q9H0D2 1346 aa22.23■■□□□ 1.15
CDC42BPB-208ENST00000561271 ADAMTSL1Q8N6G6 1762 aa22.22■■□□□ 1.15
CDC42BPB-208ENST00000561271 DUOX1Q9NRD9 1551 aa22.22■■□□□ 1.15
CDC42BPB-208ENST00000561271 CC2D2BQ6DHV5 1058 aa22.22■■□□□ 1.15
CDC42BPB-208ENST00000561271 PSMD1Q99460 953 aa22.22■■□□□ 1.15
CDC42BPB-208ENST00000561271 FSTL1Q12841 308 aa22.21■■□□□ 1.15
CDC42BPB-208ENST00000561271 RIC3Q7Z5B4 369 aa22.21■■□□□ 1.15
CDC42BPB-208ENST00000561271 SALL2Q9Y467 1007 aaPredicted RBP22.21■■□□□ 1.15
CDC42BPB-208ENST00000561271 CCDC30Q5VVM6 783 aa22.2■■□□□ 1.14
CDC42BPB-208ENST00000561271 SMC1BQ8NDV3 1235 aa22.2■■□□□ 1.14
CDC42BPB-208ENST00000561271 FAM89AQ96GI7 184 aa22.2■■□□□ 1.14
CDC42BPB-208ENST00000561271 APLP1P51693 650 aa22.19■■□□□ 1.14
CDC42BPB-208ENST00000561271 RTL5Q5HYW3 569 aaPredicted RBP22.19■■□□□ 1.14
CDC42BPB-208ENST00000561271 IL16Q14005 1332 aa22.19■■□□□ 1.14
CDC42BPB-208ENST00000561271 FANCIQ9NVI1 1328 aa22.18■■□□□ 1.14
CDC42BPB-208ENST00000561271 ATP6V0A2Q9Y487 856 aa22.18■■□□□ 1.14
CDC42BPB-208ENST00000561271 TWISTNBQ3B726 338 aaPredicted RBP22.17■■□□□ 1.14
CDC42BPB-208ENST00000561271 DDX46Q7L014 1031 aaKnown RBP22.17■■□□□ 1.14
CDC42BPB-208ENST00000561271 FAM9BQ8IZU0 186 aa22.17■■□□□ 1.14
CDC42BPB-208ENST00000561271 MYD88Q99836 296 aa22.17■■□□□ 1.14
CDC42BPB-208ENST00000561271 NCBP3Q53F19 620 aaKnown RBP22.16■■□□□ 1.14
CDC42BPB-208ENST00000561271 PSME4Q14997 1843 aa22.15■■□□□ 1.14
CDC42BPB-208ENST00000561271 FZD9O00144 591 aa22.15■■□□□ 1.14
CDC42BPB-208ENST00000561271 HTRA3P83110 453 aa22.15■■□□□ 1.14
CDC42BPB-208ENST00000561271 TRIM28Q13263 835 aaKnown RBP22.15■■□□□ 1.14
CDC42BPB-208ENST00000561271 GRAPQ13588 217 aa22.15■■□□□ 1.14
CDC42BPB-208ENST00000561271 GRIPAP1Q4V328 841 aa22.15■■□□□ 1.14
CDC42BPB-208ENST00000561271 GRAPLQ8TC17 118 aaPredicted RBP22.15■■□□□ 1.14
CDC42BPB-208ENST00000561271 JDP2Q8WYK2 163 aa22.15■■□□□ 1.14
CDC42BPB-208ENST00000561271 L3MBTL3Q96JM7 780 aaPredicted RBP22.15■■□□□ 1.14
CDC42BPB-208ENST00000561271 TRPM7Q96QT4 1865 aa22.14■■□□□ 1.13
CDC42BPB-208ENST00000561271 DDX58O95786 925 aaKnown RBP22.14■■□□□ 1.13
CDC42BPB-208ENST00000561271 POTEIP0CG38 1075 aa22.14■■□□□ 1.13
CDC42BPB-208ENST00000561271 POTEJP0CG39 1038 aa22.14■■□□□ 1.13
CDC42BPB-208ENST00000561271 LARGE2Q8N3Y3 721 aa22.14■■□□□ 1.13
CDC42BPB-208ENST00000561271 STK31Q9BXU1 1019 aa22.14■■□□□ 1.13
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