RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TAF7LQ5H9L4 462 aa13.5□□□□□ -0.25
TPM1-229ENST00000561242 SOGA3Q5TF21 947 aa13.5□□□□□ -0.25
TPM1-229ENST00000561242 G2E3Q7L622 706 aa13.5□□□□□ -0.25
TPM1-229ENST00000561242 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
TPM1-229ENST00000561242 CCDC24Q8N4L8 307 aa13.5□□□□□ -0.25
TPM1-229ENST00000561242 TTLL6Q8N841 843 aa13.5□□□□□ -0.25
TPM1-229ENST00000561242 MASTLQ96GX5 879 aa13.5□□□□□ -0.25
TPM1-229ENST00000561242 RCAN3Q9UKA8 241 aa13.5□□□□□ -0.25
TPM1-229ENST00000561242 CHMP3Q9Y3E7 222 aa13.5□□□□□ -0.25
TPM1-229ENST00000561242 IRS4O14654 1257 aaPredicted RBP13.49□□□□□ -0.25
TPM1-229ENST00000561242 ALDH1L1O75891 902 aa13.49□□□□□ -0.25
TPM1-229ENST00000561242 ERFEQ4G0M1 354 aa13.49□□□□□ -0.25
TPM1-229ENST00000561242 CCDC152Q4G0S7 254 aa13.49□□□□□ -0.25
TPM1-229ENST00000561242 ARHGAP45Q92619 1136 aa13.49□□□□□ -0.25
TPM1-229ENST00000561242 FAM89AQ96GI7 184 aa13.49□□□□□ -0.25
TPM1-229ENST00000561242 SGIP1Q9BQI5 828 aa13.49□□□□□ -0.25
TPM1-229ENST00000561242 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
TPM1-229ENST00000561242 F6X3S4 739 aa13.48□□□□□ -0.25
TPM1-229ENST00000561242 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
TPM1-229ENST00000561242 DPEP1P16444 411 aa13.48□□□□□ -0.25
TPM1-229ENST00000561242 STYK1Q6J9G0 422 aa13.48□□□□□ -0.25
TPM1-229ENST00000561242 ISCA1Q9BUE6 129 aa13.48□□□□□ -0.25
TPM1-229ENST00000561242 KDM3BQ7LBC6 1761 aa13.48□□□□□ -0.25
TPM1-229ENST00000561242 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
TPM1-229ENST00000561242 TJP1Q07157 1748 aa13.47□□□□□ -0.25
TPM1-229ENST00000561242 PDE8AO60658 829 aa13.47□□□□□ -0.25
TPM1-229ENST00000561242 ARHGAP27Q6ZUM4 889 aa13.47□□□□□ -0.25
TPM1-229ENST00000561242 LRP10Q7Z4F1 713 aa13.47□□□□□ -0.25
TPM1-229ENST00000561242 WWC3Q9ULE0 1092 aa13.47□□□□□ -0.25
TPM1-229ENST00000561242 UBR2Q8IWV8 1755 aa13.47□□□□□ -0.25
TPM1-229ENST00000561242 NEURL1BA8MQ27 555 aa13.46□□□□□ -0.25
TPM1-229ENST00000561242 G3V3G9 751 aa13.46□□□□□ -0.25
TPM1-229ENST00000561242 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
TPM1-229ENST00000561242 CHRNA5P30532 468 aa13.46□□□□□ -0.25
TPM1-229ENST00000561242 GCKRQ14397 625 aa13.46□□□□□ -0.25
TPM1-229ENST00000561242 CWF19L2Q2TBE0 894 aaKnown RBP13.46□□□□□ -0.25
TPM1-229ENST00000561242 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
TPM1-229ENST00000561242 ATF7IPQ6VMQ6 1270 aa13.46□□□□□ -0.25
TPM1-229ENST00000561242 UBE3BQ7Z3V4 1068 aa13.46□□□□□ -0.25
TPM1-229ENST00000561242 CDC5LQ99459 802 aaKnown RBP13.46□□□□□ -0.25
TPM1-229ENST00000561242 ZNF219Q9P2Y4 722 aaPredicted RBP13.46□□□□□ -0.25
TPM1-229ENST00000561242 BCAR3O75815 825 aa13.45□□□□□ -0.26
TPM1-229ENST00000561242 NTSR2O95665 410 aa13.45□□□□□ -0.26
TPM1-229ENST00000561242 GNAI3P08754 354 aa13.45□□□□□ -0.26
TPM1-229ENST00000561242 UBTFL1P0CB47 393 aaPredicted RBP13.45□□□□□ -0.26
TPM1-229ENST00000561242 IGHMBP2P38935 993 aaKnown RBP13.45□□□□□ -0.26
TPM1-229ENST00000561242 BRPF1P55201 1214 aaPredicted RBP13.45□□□□□ -0.26
TPM1-229ENST00000561242 GRIPAP1Q4V328 841 aa13.45□□□□□ -0.26
TPM1-229ENST00000561242 SLC10A5Q5PT55 438 aa13.45□□□□□ -0.26
TPM1-229ENST00000561242 DZIP1LQ8IYY4 767 aaKnown RBP13.45□□□□□ -0.26
TPM1-229ENST00000561242 EP400Q96L91 3159 aa13.45□□□□□ -0.26
TPM1-229ENST00000561242 IBTKQ9P2D0 1353 aaPredicted RBP13.45□□□□□ -0.26
TPM1-229ENST00000561242 UBN2Q6ZU65 1347 aa13.44□□□□□ -0.26
TPM1-229ENST00000561242 GRM8O00222 908 aa13.44□□□□□ -0.26
TPM1-229ENST00000561242 BBOX1O75936 387 aa13.44□□□□□ -0.26
TPM1-229ENST00000561242 CCDC57Q2TAC2 916 aa13.44□□□□□ -0.26
TPM1-229ENST00000561242 BEND3Q5T5X7 828 aa13.44□□□□□ -0.26
TPM1-229ENST00000561242 CC2D2BQ6DHV5 1058 aa13.44□□□□□ -0.26
TPM1-229ENST00000561242 TMC4Q7Z404 712 aa13.44□□□□□ -0.26
TPM1-229ENST00000561242 ITPRIPQ8IWB1 547 aa13.44□□□□□ -0.26
TPM1-229ENST00000561242 NLGN2Q8NFZ4 835 aa13.44□□□□□ -0.26
TPM1-229ENST00000561242 CLUAP1Q96AJ1 413 aa13.44□□□□□ -0.26
TPM1-229ENST00000561242 MPHOSPH8Q99549 860 aa13.44□□□□□ -0.26
TPM1-229ENST00000561242 TAF1LQ8IZX4 1826 aa13.43□□□□□ -0.26
TPM1-229ENST00000561242 CICQ96RK0 1608 aaPredicted RBP13.43□□□□□ -0.26
TPM1-229ENST00000561242 COL5A3P25940 1745 aaPredicted RBP13.43□□□□□ -0.26
TPM1-229ENST00000561242 ANKRD18AQ8IVF6 992 aa13.43□□□□□ -0.26
TPM1-229ENST00000561242 ANKRD18BA2A2Z9 1011 aa13.42□□□□□ -0.26
TPM1-229ENST00000561242 CENPBP07199 599 aaPredicted RBP13.42□□□□□ -0.26
TPM1-229ENST00000561242 SRGNP10124 158 aa13.42□□□□□ -0.26
TPM1-229ENST00000561242 IFIT5Q13325 482 aaKnown RBP13.42□□□□□ -0.26
TPM1-229ENST00000561242 RTKN2Q8IZC4 609 aa13.42□□□□□ -0.26
TPM1-229ENST00000561242 JARID2Q92833 1246 aaPredicted RBP13.42□□□□□ -0.26
TPM1-229ENST00000561242 CRAMP1Q96RY5 1269 aa13.42□□□□□ -0.26
TPM1-229ENST00000561242 VIRMAQ69YN4 1812 aaKnown RBP13.41□□□□□ -0.26
TPM1-229ENST00000561242 PPEF1O14829 653 aaPredicted RBP13.41□□□□□ -0.26
TPM1-229ENST00000561242 IGKV5-2P06315 115 aa13.41□□□□□ -0.26
TPM1-229ENST00000561242 CCDC93Q567U6 631 aa13.41□□□□□ -0.26
TPM1-229ENST00000561242 SUPT20HQ8NEM7 779 aa13.41□□□□□ -0.26
TPM1-229ENST00000561242 CCDC85AQ96PX6 553 aaPredicted RBP13.41□□□□□ -0.26
TPM1-229ENST00000561242 UBR3Q6ZT12 1888 aa13.41□□□□□ -0.26
TPM1-229ENST00000561242 ADCY9O60503 1353 aa13.41□□□□□ -0.26
TPM1-229ENST00000561242 CDHR2Q9BYE9 1310 aa13.4□□□□□ -0.26
TPM1-229ENST00000561242 LAMB4A4D0S4 1761 aa13.4□□□□□ -0.26
TPM1-229ENST00000561242 H7C1W4 665 aa13.4□□□□□ -0.26
TPM1-229ENST00000561242 C21orf2O43822 256 aa13.4□□□□□ -0.26
TPM1-229ENST00000561242 KCNJ4P48050 445 aa13.4□□□□□ -0.26
TPM1-229ENST00000561242 CTSWP56202 376 aa13.4□□□□□ -0.26
TPM1-229ENST00000561242 ANKIB1Q9P2G1 1089 aa13.4□□□□□ -0.26
TPM1-229ENST00000561242 C10orf71Q711Q0 1435 aa13.39□□□□□ -0.27
TPM1-229ENST00000561242 QSER1Q2KHR3 1735 aa13.39□□□□□ -0.27
TPM1-229ENST00000561242 RPS8P62241 208 aaKnown RBP13.39□□□□□ -0.27
TPM1-229ENST00000561242 GRAPQ13588 217 aa13.39□□□□□ -0.27
TPM1-229ENST00000561242 SF3B3Q15393 1217 aaKnown RBP13.39□□□□□ -0.27
TPM1-229ENST00000561242 PRPF40BQ6NWY9 871 aaKnown RBP13.39□□□□□ -0.27
TPM1-229ENST00000561242 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
TPM1-229ENST00000561242 CASZ1Q86V15 1759 aa13.38□□□□□ -0.27
TPM1-229ENST00000561242 GNAI2P04899 355 aa13.38□□□□□ -0.27
TPM1-229ENST00000561242 TRIM27P14373 513 aa13.38□□□□□ -0.27
TPM1-229ENST00000561242 DPP8Q6V1X1 898 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms