RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 TNRC6CQ9HCJ0 1690 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-221ENST00000561055 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
RABGGTA-221ENST00000561055 ARHGAP45Q92619 1136 aa12.28□□□□□ -0.44
RABGGTA-221ENST00000561055 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-221ENST00000561055 IGKV5-2P06315 115 aa12.27□□□□□ -0.45
RABGGTA-221ENST00000561055 KCNA3P22001 575 aa12.27□□□□□ -0.45
RABGGTA-221ENST00000561055 PDE6BP35913 854 aa12.27□□□□□ -0.45
RABGGTA-221ENST00000561055 ST5P78524 1137 aa12.27□□□□□ -0.45
RABGGTA-221ENST00000561055 NEXNQ0ZGT2 675 aa12.27□□□□□ -0.45
RABGGTA-221ENST00000561055 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
RABGGTA-221ENST00000561055 LINS1Q8NG48 757 aa12.27□□□□□ -0.45
RABGGTA-221ENST00000561055 MYD88Q99836 296 aa12.27□□□□□ -0.45
RABGGTA-221ENST00000561055 SMC4Q9NTJ3 1288 aa12.27□□□□□ -0.45
RABGGTA-221ENST00000561055 TAF1P21675 1872 aa12.27□□□□□ -0.45
RABGGTA-221ENST00000561055 SLX4Q8IY92 1834 aa12.26□□□□□ -0.45
RABGGTA-221ENST00000561055 NEURL1BA8MQ27 555 aa12.26□□□□□ -0.45
RABGGTA-221ENST00000561055 ATP5J2-PTCD1G3V325 749 aa12.26□□□□□ -0.45
RABGGTA-221ENST00000561055 ERFEQ4G0M1 354 aa12.26□□□□□ -0.45
RABGGTA-221ENST00000561055 BEND3Q5T5X7 828 aa12.26□□□□□ -0.45
RABGGTA-221ENST00000561055 CWC25Q9NXE8 425 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-221ENST00000561055 SH3TC1Q8TE82 1336 aa12.26□□□□□ -0.45
RABGGTA-221ENST00000561055 KIF16BQ96L93 1317 aa12.26□□□□□ -0.45
RABGGTA-221ENST00000561055 SBF1O95248 1867 aa12.25□□□□□ -0.45
RABGGTA-221ENST00000561055 CCDC88AQ3V6T2 1871 aa12.25□□□□□ -0.45
RABGGTA-221ENST00000561055 PCCAP05165 728 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-221ENST00000561055 DPEP1P16444 411 aa12.25□□□□□ -0.45
RABGGTA-221ENST00000561055 GTF2E1P29083 439 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-221ENST00000561055 CRY2Q49AN0 593 aa12.25□□□□□ -0.45
RABGGTA-221ENST00000561055 ZBTB38Q8NAP3 1195 aaPredicted RBP12.25□□□□□ -0.45
RABGGTA-221ENST00000561055 BCL2L13Q9BXK5 485 aa12.25□□□□□ -0.45
RABGGTA-221ENST00000561055 TRMT112Q9UI30 125 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-221ENST00000561055 ABCC12Q96J65 1359 aa12.25□□□□□ -0.45
RABGGTA-221ENST00000561055 A0A0G2JLW4 131 aa12.24□□□□□ -0.45
RABGGTA-221ENST00000561055 FAM177BA6PVY3 158 aa12.24□□□□□ -0.45
RABGGTA-221ENST00000561055 F6X3S4 739 aa12.24□□□□□ -0.45
RABGGTA-221ENST00000561055 H0YIN7 160 aa12.24□□□□□ -0.45
RABGGTA-221ENST00000561055 NPHP1O15259 732 aa12.24□□□□□ -0.45
RABGGTA-221ENST00000561055 SRGNP10124 158 aa12.24□□□□□ -0.45
RABGGTA-221ENST00000561055 GCKRQ14397 625 aa12.24□□□□□ -0.45
RABGGTA-221ENST00000561055 FER1L6Q2WGJ9 1857 aa12.24□□□□□ -0.45
RABGGTA-221ENST00000561055 NUTM1Q86Y26 1132 aa12.24□□□□□ -0.45
RABGGTA-221ENST00000561055 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
RABGGTA-221ENST00000561055 CDHR2Q9BYE9 1310 aa12.24□□□□□ -0.45
RABGGTA-221ENST00000561055 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-221ENST00000561055 H7C1W4 665 aa12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 IPO8O15397 1037 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 BCAR3O75815 825 aa12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 ALDH1L1O75891 902 aa12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 HSP90B1P14625 803 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 HOXA10P31260 410 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 CWF19L2Q2TBE0 894 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 STYK1Q6J9G0 422 aa12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 C2CD5Q86YS7 1000 aa12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 CCDC24Q8N4L8 307 aa12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 FAM89AQ96GI7 184 aa12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 API5Q9BZZ5 524 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 PIM2Q9P1W9 311 aa12.23□□□□□ -0.45
RABGGTA-221ENST00000561055 DICER1Q9UPY3 1922 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-221ENST00000561055 NPR1P16066 1061 aa12.22□□□□□ -0.45
RABGGTA-221ENST00000561055 CHRNA5P30532 468 aa12.22□□□□□ -0.45
RABGGTA-221ENST00000561055 CASP7P55210 303 aa12.22□□□□□ -0.45
RABGGTA-221ENST00000561055 SF3B3Q15393 1217 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-221ENST00000561055 SYNE4Q8N205 404 aa12.22□□□□□ -0.45
RABGGTA-221ENST00000561055 MASTLQ96GX5 879 aa12.22□□□□□ -0.45
RABGGTA-221ENST00000561055 NLRP3Q96P20 1036 aa12.22□□□□□ -0.45
RABGGTA-221ENST00000561055 SRCIN1Q9C0H9 1055 aa12.22□□□□□ -0.45
RABGGTA-221ENST00000561055 UTYO14607 1347 aa12.21□□□□□ -0.45
RABGGTA-221ENST00000561055 PLA2G12BQ9BX93 195 aa12.21□□□□□ -0.45
RABGGTA-221ENST00000561055 GOLGB1Q14789 3259 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-221ENST00000561055 ABCC4O15439 1325 aa12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 IRS4O14654 1257 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 PDE8AO60658 829 aa12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 HCLS1P14317 486 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 CCT4P50991 539 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 INTS3Q68E01 1043 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 SLC4A10Q6U841 1118 aa12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 ATF7IPQ6VMQ6 1270 aa12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 CNKSR1Q969H4 720 aa12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 YTHDC1Q96MU7 727 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 CRAMP1Q96RY5 1269 aa12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 RCAN3Q9UKA8 241 aa12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 SPEF2Q9C093 1822 aa12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 LRRC37AA6NMS7 1700 aa12.2□□□□□ -0.46
RABGGTA-221ENST00000561055 GRM8O00222 908 aa12.19□□□□□ -0.46
RABGGTA-221ENST00000561055 TRIM27P14373 513 aa12.19□□□□□ -0.46
RABGGTA-221ENST00000561055 ALDH1B1P30837 517 aa12.19□□□□□ -0.46
RABGGTA-221ENST00000561055 DALRD3Q5D0E6 543 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-221ENST00000561055 ZKSCAN2Q63HK3 967 aa12.19□□□□□ -0.46
RABGGTA-221ENST00000561055 C3orf67Q6ZVT6 689 aa12.19□□□□□ -0.46
RABGGTA-221ENST00000561055 TTLL6Q8N841 843 aa12.19□□□□□ -0.46
RABGGTA-221ENST00000561055 YBX3P16989 372 aaKnown RBP eCLIP12.18□□□□□ -0.46
RABGGTA-221ENST00000561055 C7orf43Q8WVR3 580 aa12.18□□□□□ -0.46
RABGGTA-221ENST00000561055 RTL9Q8NET4 1388 aa12.18□□□□□ -0.46
RABGGTA-221ENST00000561055 DCAF8L1A6NGE4 600 aa12.17□□□□□ -0.46
RABGGTA-221ENST00000561055 GRIN3BO60391 1043 aa12.17□□□□□ -0.46
RABGGTA-221ENST00000561055 CSF1RP07333 972 aa12.17□□□□□ -0.46
RABGGTA-221ENST00000561055 GPR162Q16538 588 aa12.17□□□□□ -0.46
RABGGTA-221ENST00000561055 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-221ENST00000561055 UBE3BQ7Z3V4 1068 aa12.17□□□□□ -0.46
RABGGTA-221ENST00000561055 RPGRQ92834 1020 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms