RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 KCNA3P22001 575 aa9.78□□□□□ -0.84
GABPB1-211ENST00000561010 CHRNA5P30532 468 aa9.78□□□□□ -0.84
GABPB1-211ENST00000561010 USPL1Q5W0Q7 1092 aa9.78□□□□□ -0.84
GABPB1-211ENST00000561010 ARHGAP27Q6ZUM4 889 aa9.78□□□□□ -0.84
GABPB1-211ENST00000561010 CCDC87Q9NVE4 849 aa9.78□□□□□ -0.84
GABPB1-211ENST00000561010 FER1L6Q2WGJ9 1857 aa9.77□□□□□ -0.85
GABPB1-211ENST00000561010 RIMBP2O15034 1052 aa9.77□□□□□ -0.85
GABPB1-211ENST00000561010 CYP19A1P11511 503 aaPredicted RBP9.77□□□□□ -0.85
GABPB1-211ENST00000561010 ZBTB1Q9Y2K1 713 aa9.77□□□□□ -0.85
GABPB1-211ENST00000561010 SOS1Q07889 1333 aaPredicted RBP9.77□□□□□ -0.85
GABPB1-211ENST00000561010 SLX4Q8IY92 1834 aa9.77□□□□□ -0.85
GABPB1-211ENST00000561010 COL15A1P39059 1388 aa9.76□□□□□ -0.85
GABPB1-211ENST00000561010 POLRMTO00411 1230 aaKnown RBP9.76□□□□□ -0.85
GABPB1-211ENST00000561010 DPYSL4O14531 572 aa9.76□□□□□ -0.85
GABPB1-211ENST00000561010 TGFB2P61812 414 aa9.76□□□□□ -0.85
GABPB1-211ENST00000561010 NUP98P52948 1817 aa9.76□□□□□ -0.85
GABPB1-211ENST00000561010 TNRC6CQ9HCJ0 1690 aaKnown RBP9.76□□□□□ -0.85
GABPB1-211ENST00000561010 WDR90Q96KV7 1748 aa9.76□□□□□ -0.85
GABPB1-211ENST00000561010 CARMIL3Q8ND23 1372 aa9.75□□□□□ -0.85
GABPB1-211ENST00000561010 ARFGEF2Q9Y6D5 1785 aa9.75□□□□□ -0.85
GABPB1-211ENST00000561010 CANXP27824 592 aaKnown RBP9.75□□□□□ -0.85
GABPB1-211ENST00000561010 MAP3K9P80192 1104 aa9.75□□□□□ -0.85
GABPB1-211ENST00000561010 IL17REQ8NFR9 667 aa9.75□□□□□ -0.85
GABPB1-211ENST00000561010 BCL2L12Q9HB09 334 aa9.75□□□□□ -0.85
GABPB1-211ENST00000561010 LAMB4A4D0S4 1761 aa9.75□□□□□ -0.85
GABPB1-211ENST00000561010 KDM3BQ7LBC6 1761 aa9.74□□□□□ -0.85
GABPB1-211ENST00000561010 ZNF316A6NFI3 1004 aaPredicted RBP9.74□□□□□ -0.85
GABPB1-211ENST00000561010 KCNQ3O43525 872 aa9.74□□□□□ -0.85
GABPB1-211ENST00000561010 ZPR1O75312 459 aa9.74□□□□□ -0.85
GABPB1-211ENST00000561010 TM4SF1P30408 202 aa9.74□□□□□ -0.85
GABPB1-211ENST00000561010 NFIXQ14938 502 aa9.74□□□□□ -0.85
GABPB1-211ENST00000561010 BICDL1Q6ZP65 573 aa9.74□□□□□ -0.85
GABPB1-211ENST00000561010 CCDC24Q8N4L8 307 aa9.74□□□□□ -0.85
GABPB1-211ENST00000561010 OXER1Q8TDS5 423 aa9.74□□□□□ -0.85
GABPB1-211ENST00000561010 ZNF496Q96IT1 587 aaPredicted RBP9.74□□□□□ -0.85
GABPB1-211ENST00000561010 PHACTR3Q96KR7 559 aa9.74□□□□□ -0.85
GABPB1-211ENST00000561010 NMRK2Q9NPI5 230 aa9.74□□□□□ -0.85
GABPB1-211ENST00000561010 ZNF330Q9Y3S2 320 aaPredicted RBP9.74□□□□□ -0.85
GABPB1-211ENST00000561010 TBC1D12O60347 775 aa9.73□□□□□ -0.85
GABPB1-211ENST00000561010 SLC34A2O95436 690 aa9.73□□□□□ -0.85
GABPB1-211ENST00000561010 PIP4K2AP48426 406 aaPredicted RBP9.73□□□□□ -0.85
GABPB1-211ENST00000561010 RASSF7Q02833 373 aa9.73□□□□□ -0.85
GABPB1-211ENST00000561010 C9orf131Q5VYM1 1079 aa9.73□□□□□ -0.85
GABPB1-211ENST00000561010 PIM2Q9P1W9 311 aa9.73□□□□□ -0.85
GABPB1-211ENST00000561010 NPC1L1Q9UHC9 1359 aa9.73□□□□□ -0.85
GABPB1-211ENST00000561010 SPDYE16A6NNV3 312 aaPredicted RBP9.72□□□□□ -0.85
GABPB1-211ENST00000561010 GNAT3A8MTJ3 354 aa9.72□□□□□ -0.85
GABPB1-211ENST00000561010 PRKAR2BP31323 418 aa9.72□□□□□ -0.85
GABPB1-211ENST00000561010 DALRD3Q5D0E6 543 aaKnown RBP9.72□□□□□ -0.85
GABPB1-211ENST00000561010 PTCD2Q8WV60 388 aaKnown RBP9.72□□□□□ -0.85
GABPB1-211ENST00000561010 NARFQ9UHQ1 456 aa9.72□□□□□ -0.85
GABPB1-211ENST00000561010 HEG1Q9ULI3 1381 aa9.72□□□□□ -0.85
GABPB1-211ENST00000561010 PRAMEF22A3QJZ6 481 aa9.71□□□□□ -0.86
GABPB1-211ENST00000561010 A1BGP04217 495 aa9.71□□□□□ -0.86
GABPB1-211ENST00000561010 SERPINB2P05120 415 aa9.71□□□□□ -0.86
GABPB1-211ENST00000561010 HSPA6P17066 643 aa9.71□□□□□ -0.86
GABPB1-211ENST00000561010 PRELPP51888 382 aa9.71□□□□□ -0.86
GABPB1-211ENST00000561010 LSM11P83369 360 aaKnown RBP eCLIP9.71□□□□□ -0.86
GABPB1-211ENST00000561010 TEFQ10587 303 aa9.71□□□□□ -0.86
GABPB1-211ENST00000561010 PDIA6Q15084 440 aa9.71□□□□□ -0.86
GABPB1-211ENST00000561010 TBC1D9BQ66K14 1250 aa9.71□□□□□ -0.86
GABPB1-211ENST00000561010 TTC5Q8N0Z6 440 aa9.71□□□□□ -0.86
GABPB1-211ENST00000561010 RSPH6AQ9H0K4 717 aa9.71□□□□□ -0.86
GABPB1-211ENST00000561010 RNF181Q9P0P0 153 aa9.71□□□□□ -0.86
GABPB1-211ENST00000561010 TBC1D2BQ9UPU7 963 aa9.71□□□□□ -0.86
GABPB1-211ENST00000561010 TULP1O00294 542 aaPredicted RBP9.7□□□□□ -0.86
GABPB1-211ENST00000561010 SEMA3EO15041 775 aa9.7□□□□□ -0.86
GABPB1-211ENST00000561010 PPP2R1AP30153 589 aa9.7□□□□□ -0.86
GABPB1-211ENST00000561010 EIF5P55010 431 aaKnown RBP9.7□□□□□ -0.86
GABPB1-211ENST00000561010 DCTN1Q14203 1278 aa9.7□□□□□ -0.86
GABPB1-211ENST00000561010 ZNF790Q6PG37 636 aa9.7□□□□□ -0.86
GABPB1-211ENST00000561010 MCM10Q7L590 875 aa9.7□□□□□ -0.86
GABPB1-211ENST00000561010 GAS2L2Q8NHY3 880 aa9.7□□□□□ -0.86
GABPB1-211ENST00000561010 U2AF1L5P0DN76 240 aaPredicted RBP9.69□□□□□ -0.86
GABPB1-211ENST00000561010 TAF1P21675 1872 aa9.69□□□□□ -0.86
GABPB1-211ENST00000561010 HTRA3P83110 453 aa9.69□□□□□ -0.86
GABPB1-211ENST00000561010 U2AF1Q01081 240 aaKnown RBP eCLIP9.69□□□□□ -0.86
GABPB1-211ENST00000561010 ANKRD13DQ6ZTN6 518 aa9.69□□□□□ -0.86
GABPB1-211ENST00000561010 C2CD5Q86YS7 1000 aa9.69□□□□□ -0.86
GABPB1-211ENST00000561010 CEMIPQ8WUJ3 1361 aa9.69□□□□□ -0.86
GABPB1-211ENST00000561010 BTBD11A6QL63 1104 aa9.68□□□□□ -0.86
GABPB1-211ENST00000561010 STARD3NLO95772 234 aa9.68□□□□□ -0.86
GABPB1-211ENST00000561010 CFAP53Q96M91 514 aa9.68□□□□□ -0.86
GABPB1-211ENST00000561010 PCDHGA4Q9Y5G9 962 aa9.68□□□□□ -0.86
GABPB1-211ENST00000561010 USP16Q9Y5T5 823 aa9.68□□□□□ -0.86
GABPB1-211ENST00000561010 LAMB2P55268 1798 aa9.68□□□□□ -0.86
GABPB1-211ENST00000561010 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
GABPB1-211ENST00000561010 RRAGCQ9HB90 399 aa9.67□□□□□ -0.86
GABPB1-211ENST00000561010 MIS18AQ9NYP9 233 aa9.67□□□□□ -0.86
GABPB1-211ENST00000561010 ANKRD36CQ5JPF3 1778 aa9.66□□□□□ -0.86
GABPB1-211ENST00000561010 TESPA1A2RU30 521 aaPredicted RBP9.66□□□□□ -0.86
GABPB1-211ENST00000561010 EVI5O60447 810 aa9.66□□□□□ -0.86
GABPB1-211ENST00000561010 CAMTA2O94983 1202 aa9.66□□□□□ -0.86
GABPB1-211ENST00000561010 PRR5LQ6MZQ0 368 aa9.66□□□□□ -0.86
GABPB1-211ENST00000561010 ZNF622Q969S3 477 aaKnown RBP eCLIP9.66□□□□□ -0.864e-7■■□□□ 12.1
GABPB1-211ENST00000561010 A0A087WZG4 1122 aa9.65□□□□□ -0.86
GABPB1-211ENST00000561010 H0YIN7 160 aa9.65□□□□□ -0.86
GABPB1-211ENST00000561010 NFKBIEO00221 500 aa9.65□□□□□ -0.86
GABPB1-211ENST00000561010 TOMM70O94826 608 aa9.65□□□□□ -0.86
GABPB1-211ENST00000561010 NUDT7P0C024 238 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms