RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 NFATC2IPQ8NCF5 419 aa16.71■□□□□ 0.27
RABGGTA-220ENST00000560998 RILPL2Q969X0 211 aa16.71■□□□□ 0.27
RABGGTA-220ENST00000560998 DDX58O95786 925 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-220ENST00000560998 C9orf78Q9NZ63 289 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-220ENST00000560998 CWF19L2Q2TBE0 894 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-220ENST00000560998 BRINP3Q76B58 766 aa16.69■□□□□ 0.26
RABGGTA-220ENST00000560998 UNC5CLQ8IV45 518 aa16.69■□□□□ 0.26
RABGGTA-220ENST00000560998 LINS1Q8NG48 757 aa16.69■□□□□ 0.26
RABGGTA-220ENST00000560998 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
RABGGTA-220ENST00000560998 CYP27B1O15528 508 aa16.69■□□□□ 0.26
RABGGTA-220ENST00000560998 BRD1O95696 1058 aa16.69■□□□□ 0.26
RABGGTA-220ENST00000560998 ZGPATQ8N5A5 531 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-220ENST00000560998 DCAF5Q96JK2 942 aa16.69■□□□□ 0.26
RABGGTA-220ENST00000560998 NAP1L2Q9ULW6 460 aaPredicted RBP16.69■□□□□ 0.26
RABGGTA-220ENST00000560998 NSFL1CQ9UNZ2 370 aaKnown RBP16.69■□□□□ 0.26
RABGGTA-220ENST00000560998 UTYO14607 1347 aa16.69■□□□□ 0.26
RABGGTA-220ENST00000560998 PI4K2BQ8TCG2 481 aa16.68■□□□□ 0.26
RABGGTA-220ENST00000560998 TSC1Q92574 1164 aa16.68■□□□□ 0.26
RABGGTA-220ENST00000560998 PARP4Q9UKK3 1724 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-220ENST00000560998 STRCQ7RTU9 1775 aa16.67■□□□□ 0.26
RABGGTA-220ENST00000560998 GRM8O00222 908 aa16.67■□□□□ 0.26
RABGGTA-220ENST00000560998 AIMP1Q12904 312 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-220ENST00000560998 ZNF496Q96IT1 587 aaPredicted RBP16.67■□□□□ 0.26
RABGGTA-220ENST00000560998 USP42Q9H9J4 1324 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-220ENST00000560998 ZNF771Q7L3S4 317 aaPredicted RBP16.66■□□□□ 0.26
RABGGTA-220ENST00000560998 CCDC66A2RUB6 948 aa16.66■□□□□ 0.26
RABGGTA-220ENST00000560998 ADCY5O95622 1261 aa16.66■□□□□ 0.26
RABGGTA-220ENST00000560998 FAM193AP78312 1265 aa16.66■□□□□ 0.26
RABGGTA-220ENST00000560998 SLC20A2Q08357 652 aa16.66■□□□□ 0.26
RABGGTA-220ENST00000560998 JARID2Q92833 1246 aaPredicted RBP16.66■□□□□ 0.26
RABGGTA-220ENST00000560998 INTS4Q96HW7 963 aaKnown RBP16.66■□□□□ 0.26
RABGGTA-220ENST00000560998 OS9Q13438 667 aaPredicted RBP16.65■□□□□ 0.26
RABGGTA-220ENST00000560998 LARP1Q6PKG0 1096 aaKnown RBP16.65■□□□□ 0.26
RABGGTA-220ENST00000560998 RIC3Q7Z5B4 369 aa16.65■□□□□ 0.26
RABGGTA-220ENST00000560998 KIAA1524Q8TCG1 905 aa16.65■□□□□ 0.26
RABGGTA-220ENST00000560998 SUCLG2Q96I99 432 aa16.65■□□□□ 0.26
RABGGTA-220ENST00000560998 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 RIOK3O14730 519 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 IGKV5-2P06315 115 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 SNRPA1P09661 255 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 MYL6BP14649 208 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 MCCP23508 829 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 XAGE3Q8WTP9 111 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 KAZALD1Q96I82 304 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 ANO2Q9NQ90 1003 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 U2AF2P26368 475 aaKnown RBP eCLIP16.64■□□□□ 0.252e-6■■■□□ 16.9
RABGGTA-220ENST00000560998 CUL4AQ13619 759 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 CCDC183Q5T5S1 534 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 ERC1Q8IUD2 1116 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 TTC5Q8N0Z6 440 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 TTC12Q9H892 705 aaPredicted RBP16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 USP25Q9UHP3 1055 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 TTC41PQ6P2S7 1318 aa16.64■□□□□ 0.25
RABGGTA-220ENST00000560998 GLI3P10071 1580 aa16.63■□□□□ 0.25
RABGGTA-220ENST00000560998 GOLGA6L6A8MZA4 724 aa16.63■□□□□ 0.25
RABGGTA-220ENST00000560998 MAP4K4O95819 1239 aaPredicted RBP16.63■□□□□ 0.25
RABGGTA-220ENST00000560998 CDK11BP21127 795 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-220ENST00000560998 ANAPC15P60006 121 aa16.63■□□□□ 0.25
RABGGTA-220ENST00000560998 COPS6Q7L5N1 327 aa16.63■□□□□ 0.25
RABGGTA-220ENST00000560998 LRP10Q7Z4F1 713 aa16.63■□□□□ 0.25
RABGGTA-220ENST00000560998 IL17RAQ96F46 866 aa16.63■□□□□ 0.25
RABGGTA-220ENST00000560998 FMNL2Q96PY5 1086 aa16.63■□□□□ 0.25
RABGGTA-220ENST00000560998 SOS2Q07890 1332 aaPredicted RBP16.63■□□□□ 0.25
RABGGTA-220ENST00000560998 LAMB4A4D0S4 1761 aa16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 WDR17Q8IZU2 1322 aa16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 NEURL1BA8MQ27 555 aa16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 EPB41L2O43491 1005 aaKnown RBP16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 CABP4P57796 275 aa16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 CREBRFQ8IUR6 639 aa16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 BICC1Q9H694 974 aaKnown RBP16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 CGNQ9P2M7 1197 aaKnown RBP16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 PALD1Q9ULE6 856 aa16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 PA2G4Q9UQ80 394 aaKnown RBP16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 USP16Q9Y5T5 823 aa16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 KDM4AO75164 1064 aa16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 NEXNQ0ZGT2 675 aa16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 CNTROBQ8N137 903 aa16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 CLASRPQ8N2M8 674 aaKnown RBP16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 METTL22Q9BUU2 404 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 IL25Q9H293 177 aa16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 PRDM11Q9NQV5 511 aa16.62■□□□□ 0.25
RABGGTA-220ENST00000560998 GLRX3O76003 335 aaKnown RBP16.61■□□□□ 0.25
RABGGTA-220ENST00000560998 PDIA4P13667 645 aaKnown RBP16.61■□□□□ 0.25
RABGGTA-220ENST00000560998 ZNF830Q96NB3 372 aaPredicted RBP16.61■□□□□ 0.25
RABGGTA-220ENST00000560998 SLAIN2Q9P270 581 aa16.61■□□□□ 0.25
RABGGTA-220ENST00000560998 ABCA3Q99758 1704 aa16.61■□□□□ 0.25
RABGGTA-220ENST00000560998 NEK4P51957 841 aa16.6■□□□□ 0.25
RABGGTA-220ENST00000560998 GCKRQ14397 625 aa16.6■□□□□ 0.25
RABGGTA-220ENST00000560998 TMX3Q96JJ7 454 aa16.6■□□□□ 0.25
RABGGTA-220ENST00000560998 MYD88Q99836 296 aa16.6■□□□□ 0.25
RABGGTA-220ENST00000560998 COL5A2P05997 1499 aaPredicted RBP16.6■□□□□ 0.25
RABGGTA-220ENST00000560998 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
RABGGTA-220ENST00000560998 SGSM2O43147 1006 aa16.59■□□□□ 0.25
RABGGTA-220ENST00000560998 ANKRD13DQ6ZTN6 518 aa16.59■□□□□ 0.25
RABGGTA-220ENST00000560998 ECHDC1Q9NTX5 307 aa16.59■□□□□ 0.25
RABGGTA-220ENST00000560998 CTNNA3Q9UI47 895 aa16.59■□□□□ 0.25
RABGGTA-220ENST00000560998 DDX41Q9UJV9 622 aaKnown RBP16.59■□□□□ 0.25
RABGGTA-220ENST00000560998 AFDNP55196 1824 aaKnown RBP16.59■□□□□ 0.25
RABGGTA-220ENST00000560998 PCDH11XQ9BZA7 1347 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms