RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 GJB2P29033 226 aa11.75□□□□□ -0.53
SNX22-206ENST00000560997 EPHA10Q5JZY3 1008 aa11.75□□□□□ -0.53
SNX22-206ENST00000560997 JARID2Q92833 1246 aaPredicted RBP11.75□□□□□ -0.53
SNX22-206ENST00000560997 BOLA2Q9H3K6 86 aa11.75□□□□□ -0.53
SNX22-206ENST00000560997 ZSWIM6Q9HCJ5 1215 aa11.75□□□□□ -0.53
SNX22-206ENST00000560997 KDM6AO15550 1401 aaPredicted RBP11.74□□□□□ -0.53
SNX22-206ENST00000560997 A0A0D9SFI3 127 aa11.74□□□□□ -0.53
SNX22-206ENST00000560997 FIBPO43427 364 aa11.74□□□□□ -0.53
SNX22-206ENST00000560997 VPS53Q5VIR6 699 aa11.74□□□□□ -0.53
SNX22-206ENST00000560997 KCNB2Q92953 911 aa11.74□□□□□ -0.53
SNX22-206ENST00000560997 CYP46A1Q9Y6A2 500 aa11.74□□□□□ -0.53
SNX22-206ENST00000560997 CREB3L3Q68CJ9 461 aa11.74□□□□□ -0.53
SNX22-206ENST00000560997 NECAB1Q8N987 351 aa11.74□□□□□ -0.53
SNX22-206ENST00000560997 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
SNX22-206ENST00000560997 XAGE3Q8WTP9 111 aa11.74□□□□□ -0.53
SNX22-206ENST00000560997 HDAC5Q9UQL6 1122 aa11.74□□□□□ -0.53
SNX22-206ENST00000560997 NEURL1BA8MQ27 555 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 ME3Q16798 604 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 NLRP2Q9NX02 1062 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 TAF6LQ9Y6J9 622 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 KCNJ4P48050 445 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 DDX17Q92841 729 aaKnown RBP11.73□□□□□ -0.53
SNX22-206ENST00000560997 EDC3Q96F86 508 aaKnown RBP11.73□□□□□ -0.53
SNX22-206ENST00000560997 MYD88Q99836 296 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 SLC52A2Q9HAB3 445 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 NPHP3Q7Z494 1330 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 ADAMTSL3P82987 1691 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 COPS6Q7L5N1 327 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 TCEANC2Q96MN5 208 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 TM6SF1Q9BZW5 370 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 MTMR6Q9Y217 621 aa11.73□□□□□ -0.53
SNX22-206ENST00000560997 OFD1O75665 1012 aa11.72□□□□□ -0.53
SNX22-206ENST00000560997 LARP1Q6PKG0 1096 aaKnown RBP11.72□□□□□ -0.53
SNX22-206ENST00000560997 RAPGEF4Q8WZA2 1011 aa11.72□□□□□ -0.53
SNX22-206ENST00000560997 MAP4K1Q92918 833 aa11.72□□□□□ -0.53
SNX22-206ENST00000560997 ZNF496Q96IT1 587 aaPredicted RBP11.72□□□□□ -0.53
SNX22-206ENST00000560997 FSD1Q9BTV5 496 aa11.72□□□□□ -0.53
SNX22-206ENST00000560997 TPCN1Q9ULQ1 816 aa11.72□□□□□ -0.53
SNX22-206ENST00000560997 ZKSCAN5Q9Y2L8 839 aa11.72□□□□□ -0.53
SNX22-206ENST00000560997 SCN11AQ9UI33 1791 aa11.72□□□□□ -0.53
SNX22-206ENST00000560997 SLC27A2O14975 620 aa11.72□□□□□ -0.53
SNX22-206ENST00000560997 DNM1Q05193 864 aaKnown RBP11.72□□□□□ -0.53
SNX22-206ENST00000560997 GCKRQ14397 625 aa11.72□□□□□ -0.53
SNX22-206ENST00000560997 PROSER2Q86WR7 435 aaPredicted RBP11.72□□□□□ -0.53
SNX22-206ENST00000560997 C1orf167Q5SNV9 1468 aa11.72□□□□□ -0.53
SNX22-206ENST00000560997 PHF14O94880 888 aa11.71□□□□□ -0.53
SNX22-206ENST00000560997 PHKG2P15735 406 aa11.71□□□□□ -0.53
SNX22-206ENST00000560997 ZKSCAN1P17029 563 aaPredicted RBP11.71□□□□□ -0.53
SNX22-206ENST00000560997 CCDC183Q5T5S1 534 aa11.71□□□□□ -0.53
SNX22-206ENST00000560997 MEGF6O75095 1541 aa11.71□□□□□ -0.53
SNX22-206ENST00000560997 NEXNQ0ZGT2 675 aa11.71□□□□□ -0.53
SNX22-206ENST00000560997 ZNF589Q86UQ0 364 aaPredicted RBP11.71□□□□□ -0.53
SNX22-206ENST00000560997 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
SNX22-206ENST00000560997 VPS37CA5D8V6 355 aaPredicted RBP11.71□□□□□ -0.54
SNX22-206ENST00000560997 UBE2HP62256 183 aa11.71□□□□□ -0.54
SNX22-206ENST00000560997 ZSCAN31Q96LW9 406 aaPredicted RBP11.71□□□□□ -0.54
SNX22-206ENST00000560997 SH2B1Q9NRF2 756 aaPredicted RBP11.71□□□□□ -0.54
SNX22-206ENST00000560997 LMTK3Q96Q04 1460 aa11.7□□□□□ -0.54
SNX22-206ENST00000560997 ZNF500O60304 480 aaPredicted RBP11.7□□□□□ -0.54
SNX22-206ENST00000560997 METTL22Q9BUU2 404 aaPredicted RBP11.7□□□□□ -0.54
SNX22-206ENST00000560997 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
SNX22-206ENST00000560997 NDUFB9Q9Y6M9 179 aa11.7□□□□□ -0.54
SNX22-206ENST00000560997 LRP10Q7Z4F1 713 aa11.7□□□□□ -0.54
SNX22-206ENST00000560997 MPNDQ8N594 471 aa11.7□□□□□ -0.54
SNX22-206ENST00000560997 CCDC39Q9UFE4 941 aa11.7□□□□□ -0.54
SNX22-206ENST00000560997 MED23Q9ULK4 1368 aa11.7□□□□□ -0.54
SNX22-206ENST00000560997 HIP1O00291 1037 aa11.7□□□□□ -0.54
SNX22-206ENST00000560997 CHGBP05060 677 aa11.7□□□□□ -0.54
SNX22-206ENST00000560997 SNRKQ9NRH2 765 aa11.7□□□□□ -0.54
SNX22-206ENST00000560997 ALS2Q96Q42 1657 aa11.7□□□□□ -0.54
SNX22-206ENST00000560997 HCLS1P14317 486 aaPredicted RBP11.69□□□□□ -0.54
SNX22-206ENST00000560997 TATP17735 454 aaPredicted RBP11.69□□□□□ -0.54
SNX22-206ENST00000560997 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.69□□□□□ -0.54
SNX22-206ENST00000560997 CABLES1Q8TDN4 633 aa11.69□□□□□ -0.54
SNX22-206ENST00000560997 USP25Q9UHP3 1055 aa11.69□□□□□ -0.54
SNX22-206ENST00000560997 DBNLQ9UJU6 430 aaKnown RBP11.69□□□□□ -0.54
SNX22-206ENST00000560997 ATP6V1DQ9Y5K8 247 aa11.69□□□□□ -0.54
SNX22-206ENST00000560997 MRC1P22897 1456 aa11.69□□□□□ -0.54
SNX22-206ENST00000560997 CHRNA2Q15822 529 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 ANKRD13DQ6ZTN6 518 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 UBE3BQ7Z3V4 1068 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 FERMT3Q86UX7 667 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 COL15A1P39059 1388 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 PTCD1O75127 700 aaKnown RBP11.68□□□□□ -0.54
SNX22-206ENST00000560997 PTMAP06454 111 aaKnown RBP11.68□□□□□ -0.54
SNX22-206ENST00000560997 RFX5P48382 616 aaPredicted RBP11.68□□□□□ -0.54
SNX22-206ENST00000560997 TFCP2Q12800 502 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 FAM173BQ6P4H8 233 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 GIMAP6Q6P9H5 292 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 BLOC1S2Q6QNY1 142 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 CDC37L1Q7L3B6 337 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 R3HCC1Q9Y3T6 440 aaKnown RBP11.68□□□□□ -0.54
SNX22-206ENST00000560997 KIF1AQ12756 1690 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 CYP27B1O15528 508 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 CSB-PGBD3P0DP91 1061 aa11.68□□□□□ -0.54
SNX22-206ENST00000560997 HOXD11P31277 338 aaPredicted RBP11.68□□□□□ -0.54
SNX22-206ENST00000560997 PTPN12Q05209 780 aaKnown RBP11.68□□□□□ -0.54
SNX22-206ENST00000560997 AFDNP55196 1824 aaKnown RBP11.67□□□□□ -0.54
SNX22-206ENST00000560997 TPM2P07951 284 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms