RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 CCDC24Q8N4L8 307 aa10.09□□□□□ -0.79
APH1B-209ENST00000560716 GPR101Q96P66 508 aaPredicted RBP10.09□□□□□ -0.79
APH1B-209ENST00000560716 ZNF277Q9NRM2 450 aaPredicted RBP10.09□□□□□ -0.79
APH1B-209ENST00000560716 CLEC11AQ9Y240 323 aa10.09□□□□□ -0.79
APH1B-209ENST00000560716 KNSTRNQ9Y448 316 aa10.09□□□□□ -0.79
APH1B-209ENST00000560716 ANKRD36CQ5JPF3 1778 aa10.09□□□□□ -0.79
APH1B-209ENST00000560716 AKAP11Q9UKA4 1901 aa10.08□□□□□ -0.8
APH1B-209ENST00000560716 PER1O15534 1290 aaPredicted RBP10.08□□□□□ -0.8
APH1B-209ENST00000560716 HMOX1P09601 288 aa10.08□□□□□ -0.8
APH1B-209ENST00000560716 BRPF1P55201 1214 aaPredicted RBP10.08□□□□□ -0.8
APH1B-209ENST00000560716 EIF4G2P78344 907 aaKnown RBP eCLIP10.08□□□□□ -0.8
APH1B-209ENST00000560716 NBPF5PQ86XG9 351 aaPredicted RBP10.08□□□□□ -0.8
APH1B-209ENST00000560716 CDHR2Q9BYE9 1310 aa10.07□□□□□ -0.8
APH1B-209ENST00000560716 KDM3BQ7LBC6 1761 aa10.07□□□□□ -0.8
APH1B-209ENST00000560716 SAPCD2Q86UD0 394 aa10.07□□□□□ -0.8
APH1B-209ENST00000560716 JDP2Q8WYK2 163 aa10.07□□□□□ -0.8
APH1B-209ENST00000560716 BEGAINQ9BUH8 593 aa10.07□□□□□ -0.8
APH1B-209ENST00000560716 ABT1Q9ULW3 272 aaKnown RBP10.07□□□□□ -0.8
APH1B-209ENST00000560716 USP16Q9Y5T5 823 aa10.07□□□□□ -0.8
APH1B-209ENST00000560716 CCDC85CA6NKD9 419 aa10.06□□□□□ -0.8
APH1B-209ENST00000560716 EIF6P56537 245 aaKnown RBP10.06□□□□□ -0.8
APH1B-209ENST00000560716 NPM2Q86SE8 214 aaKnown RBP10.06□□□□□ -0.8
APH1B-209ENST00000560716 ZC3H15Q8WU90 426 aaKnown RBP10.06□□□□□ -0.8
APH1B-209ENST00000560716 MCOLN1Q9GZU1 580 aa10.06□□□□□ -0.8
APH1B-209ENST00000560716 POLR2AP24928 1970 aaKnown RBP10.06□□□□□ -0.8
APH1B-209ENST00000560716 LAMB2P55268 1798 aa10.06□□□□□ -0.8
APH1B-209ENST00000560716 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
APH1B-209ENST00000560716 ERVV-1B6SEH8 477 aa10.05□□□□□ -0.8
APH1B-209ENST00000560716 SNRPA1P09661 255 aaKnown RBP10.05□□□□□ -0.8
APH1B-209ENST00000560716 HSPA5P11021 654 aaKnown RBP10.05□□□□□ -0.8
APH1B-209ENST00000560716 LMOD1P29536 600 aaPredicted RBP10.05□□□□□ -0.8
APH1B-209ENST00000560716 CYP4F22Q6NT55 531 aa10.05□□□□□ -0.8
APH1B-209ENST00000560716 NBPF10Q6P3W6 841 aaKnown RBP10.05□□□□□ -0.8
APH1B-209ENST00000560716 OLFM4Q6UX06 510 aa10.05□□□□□ -0.8
APH1B-209ENST00000560716 NBPF15Q8N660 670 aa10.05□□□□□ -0.8
APH1B-209ENST00000560716 CRAMP1Q96RY5 1269 aa10.05□□□□□ -0.8
APH1B-209ENST00000560716 ADARB2Q9NS39 739 aaKnown RBP10.05□□□□□ -0.8
APH1B-209ENST00000560716 LRRC37AA6NMS7 1700 aa10.04□□□□□ -0.8
APH1B-209ENST00000560716 DLG5Q8TDM6 1919 aa10.04□□□□□ -0.8
APH1B-209ENST00000560716 BTBD11A6QL63 1104 aa10.04□□□□□ -0.8
APH1B-209ENST00000560716 NPHP1O15259 732 aa10.04□□□□□ -0.8
APH1B-209ENST00000560716 EPS15P42566 896 aa10.04□□□□□ -0.8
APH1B-209ENST00000560716 RTFDC1Q9BY42 306 aaPredicted RBP10.04□□□□□ -0.8
APH1B-209ENST00000560716 NYXQ9GZU5 481 aa10.04□□□□□ -0.8
APH1B-209ENST00000560716 GPRC5DQ9NZD1 345 aa10.04□□□□□ -0.8
APH1B-209ENST00000560716 NIP7Q9Y221 180 aaKnown RBP eCLIP10.04□□□□□ -0.8
APH1B-209ENST00000560716 KCNQ3O43525 872 aa10.03□□□□□ -0.8
APH1B-209ENST00000560716 HTATSF1O43719 755 aaKnown RBP10.03□□□□□ -0.8
APH1B-209ENST00000560716 SAGE1Q9NXZ1 904 aa10.03□□□□□ -0.8
APH1B-209ENST00000560716 ABCC12Q96J65 1359 aa10.02□□□□□ -0.8
APH1B-209ENST00000560716 DDX60Q8IY21 1712 aaKnown RBP10.02□□□□□ -0.8
APH1B-209ENST00000560716 FMR1Q06787 632 aaKnown RBP eCLIP10.02□□□□□ -0.81
APH1B-209ENST00000560716 NOGQ13253 232 aa10.02□□□□□ -0.81
APH1B-209ENST00000560716 POLR3GLQ9BT43 218 aa10.02□□□□□ -0.81
APH1B-209ENST00000560716 ZNF330Q9Y3S2 320 aaPredicted RBP10.02□□□□□ -0.81
APH1B-209ENST00000560716 PSME4Q14997 1843 aa10.01□□□□□ -0.81
APH1B-209ENST00000560716 SPDYE4A6NLX3 237 aa10.01□□□□□ -0.81
APH1B-209ENST00000560716 TRAF5O00463 557 aa10.01□□□□□ -0.81
APH1B-209ENST00000560716 AOC2O75106 756 aa10.01□□□□□ -0.81
APH1B-209ENST00000560716 POLA2Q14181 598 aa10.01□□□□□ -0.81
APH1B-209ENST00000560716 HLFQ16534 295 aa10.01□□□□□ -0.81
APH1B-209ENST00000560716 RSPH6AQ9H0K4 717 aa10.01□□□□□ -0.81
APH1B-209ENST00000560716 PRAMEF22A3QJZ6 481 aa10□□□□□ -0.81
APH1B-209ENST00000560716 SLC10A5Q5PT55 438 aa10□□□□□ -0.81
APH1B-209ENST00000560716 LARGE2Q8N3Y3 721 aa10□□□□□ -0.81
APH1B-209ENST00000560716 PHACTR3Q96KR7 559 aa10□□□□□ -0.81
APH1B-209ENST00000560716 ZNRF3Q9ULT6 936 aa10□□□□□ -0.81
APH1B-209ENST00000560716 GJA3Q9Y6H8 435 aa10□□□□□ -0.81
APH1B-209ENST00000560716 MAP3K15Q6ZN16 1313 aa10□□□□□ -0.81
APH1B-209ENST00000560716 FAM155AB1AL88 458 aaPredicted RBP9.99□□□□□ -0.81
APH1B-209ENST00000560716 CELF2O95319 508 aaKnown RBP9.99□□□□□ -0.81
APH1B-209ENST00000560716 CXCL9Q07325 125 aa9.99□□□□□ -0.81
APH1B-209ENST00000560716 DGKZQ13574 1117 aa9.99□□□□□ -0.81
APH1B-209ENST00000560716 PRPF38BQ5VTL8 546 aaKnown RBP9.99□□□□□ -0.81
APH1B-209ENST00000560716 CDC37L1Q7L3B6 337 aa9.99□□□□□ -0.81
APH1B-209ENST00000560716 NIM1KQ8IY84 436 aa9.99□□□□□ -0.81
APH1B-209ENST00000560716 ZNF34Q8IZ26 560 aa9.99□□□□□ -0.81
APH1B-209ENST00000560716 SUPT20HQ8NEM7 779 aa9.99□□□□□ -0.81
APH1B-209ENST00000560716 ATP6V0A2Q9Y487 856 aa9.99□□□□□ -0.81
APH1B-209ENST00000560716 DUOX1Q9NRD9 1551 aa9.99□□□□□ -0.81
APH1B-209ENST00000560716 LAMB1P07942 1786 aa9.98□□□□□ -0.81
APH1B-209ENST00000560716 NTSR2O95665 410 aa9.98□□□□□ -0.81
APH1B-209ENST00000560716 PIP4K2AP48426 406 aaPredicted RBP9.98□□□□□ -0.81
APH1B-209ENST00000560716 HIRAP54198 1017 aaPredicted RBP9.98□□□□□ -0.81
APH1B-209ENST00000560716 CIAPIN1Q6FI81 312 aa9.98□□□□□ -0.81
APH1B-209ENST00000560716 RPGRQ92834 1020 aaKnown RBP9.98□□□□□ -0.81
APH1B-209ENST00000560716 RBM17Q96I25 401 aaKnown RBP9.98□□□□□ -0.81
APH1B-209ENST00000560716 ERBB4Q15303 1308 aa9.98□□□□□ -0.81
APH1B-209ENST00000560716 UBN2Q6ZU65 1347 aa9.98□□□□□ -0.81
APH1B-209ENST00000560716 RBBP6Q7Z6E9 1792 aaKnown RBP9.98□□□□□ -0.81
APH1B-209ENST00000560716 ZNF609O15014 1411 aa9.98□□□□□ -0.81
APH1B-209ENST00000560716 PPEF1O14829 653 aaPredicted RBP9.97□□□□□ -0.81
APH1B-209ENST00000560716 GTF2E1P29083 439 aaPredicted RBP9.97□□□□□ -0.81
APH1B-209ENST00000560716 KIAA2012Q0VF49 1180 aa9.97□□□□□ -0.81
APH1B-209ENST00000560716 SP8Q8IXZ3 490 aa9.97□□□□□ -0.81
APH1B-209ENST00000560716 REM2Q8IYK8 340 aaPredicted RBP9.97□□□□□ -0.81
APH1B-209ENST00000560716 DPF2Q92785 391 aa9.97□□□□□ -0.81
APH1B-209ENST00000560716 GLIS2Q9BZE0 524 aaPredicted RBP9.97□□□□□ -0.81
APH1B-209ENST00000560716 TSKSQ9UJT2 592 aa9.97□□□□□ -0.81
APH1B-209ENST00000560716 TAF1P21675 1872 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms