RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 TSPYL4Q9UJ04 414 aa10.38□□□□□ -0.75
CCDC33-209ENST00000560565 QSER1Q2KHR3 1735 aa10.38□□□□□ -0.75
CCDC33-209ENST00000560565 C5P01031 1676 aa10.38□□□□□ -0.75
CCDC33-209ENST00000560565 PNPLA7Q6ZV29 1317 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 RNMTO43148 476 aaKnown RBP10.37□□□□□ -0.75
CCDC33-209ENST00000560565 HOXB7P09629 217 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 PTGER2P43116 358 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 TEFQ10587 303 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 UVSSAQ2YD98 709 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 SASS6Q6UVJ0 657 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 SMAP1Q8IYB5 467 aaPredicted RBP10.37□□□□□ -0.75
CCDC33-209ENST00000560565 TMEM57Q8N5G2 664 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 SPRYD3Q8NCJ5 442 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 SLC16A10Q8TF71 515 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 PDLIM2Q96JY6 352 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 PRIMPOLQ96LW4 560 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 ARXQ96QS3 562 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 RBM42Q9BTD8 480 aaKnown RBP10.37□□□□□ -0.75
CCDC33-209ENST00000560565 LGR6Q9HBX8 967 aa10.37□□□□□ -0.75
CCDC33-209ENST00000560565 TUBGCP6Q96RT7 1819 aa10.36□□□□□ -0.75
CCDC33-209ENST00000560565 ANKRD45Q5TZF3 282 aa10.36□□□□□ -0.75
CCDC33-209ENST00000560565 FLAD1Q8NFF5 587 aa10.36□□□□□ -0.75
CCDC33-209ENST00000560565 AK7Q96M32 723 aa10.36□□□□□ -0.75
CCDC33-209ENST00000560565 BCL2L13Q9BXK5 485 aa10.36□□□□□ -0.75
CCDC33-209ENST00000560565 FHDC1Q9C0D6 1143 aaPredicted RBP10.36□□□□□ -0.75
CCDC33-209ENST00000560565 SLC52A2Q9HAB3 445 aa10.36□□□□□ -0.75
CCDC33-209ENST00000560565 ZKSCAN5Q9Y2L8 839 aa10.36□□□□□ -0.75
CCDC33-209ENST00000560565 PTCD1O75127 700 aaKnown RBP10.35□□□□□ -0.75
CCDC33-209ENST00000560565 HMMRO75330 724 aa10.35□□□□□ -0.75
CCDC33-209ENST00000560565 KIAA2012Q0VF49 1180 aa10.35□□□□□ -0.75
CCDC33-209ENST00000560565 ITPK1Q13572 414 aa10.35□□□□□ -0.75
CCDC33-209ENST00000560565 COL23A1Q86Y22 540 aaPredicted RBP10.35□□□□□ -0.75
CCDC33-209ENST00000560565 RPAP2Q8IXW5 612 aaPredicted RBP10.35□□□□□ -0.75
CCDC33-209ENST00000560565 LINC00116Q8NCU8 138 aa10.35□□□□□ -0.75
CCDC33-209ENST00000560565 C4BP0C0L5 1744 aa10.35□□□□□ -0.75
CCDC33-209ENST00000560565 POLD1P28340 1107 aa10.34□□□□□ -0.75
CCDC33-209ENST00000560565 ZSCAN23Q3MJ62 389 aa10.34□□□□□ -0.75
CCDC33-209ENST00000560565 LRSAM1Q6UWE0 723 aa10.34□□□□□ -0.75
CCDC33-209ENST00000560565 TBC1D9Q6ZT07 1266 aa10.34□□□□□ -0.75
CCDC33-209ENST00000560565 C8orf58Q8NAV2 365 aa10.34□□□□□ -0.75
CCDC33-209ENST00000560565 LNPKQ9C0E8 428 aa10.34□□□□□ -0.75
CCDC33-209ENST00000560565 GOLGB1Q14789 3259 aaKnown RBP10.34□□□□□ -0.75
CCDC33-209ENST00000560565 ANAPC15P60006 121 aa10.33□□□□□ -0.76
CCDC33-209ENST00000560565 CHAF1AQ13111 956 aaPredicted RBP10.33□□□□□ -0.76
CCDC33-209ENST00000560565 MRPL50Q8N5N7 158 aaKnown RBP10.33□□□□□ -0.76
CCDC33-209ENST00000560565 INTS4Q96HW7 963 aaKnown RBP10.33□□□□□ -0.76
CCDC33-209ENST00000560565 SLC4A9Q96Q91 983 aa10.33□□□□□ -0.76
CCDC33-209ENST00000560565 SGIP1Q9BQI5 828 aa10.33□□□□□ -0.76
CCDC33-209ENST00000560565 ABCC4O15439 1325 aa10.33□□□□□ -0.76
CCDC33-209ENST00000560565 PTPRCP08575 1304 aa10.33□□□□□ -0.76
CCDC33-209ENST00000560565 UBR3Q6ZT12 1888 aa10.32□□□□□ -0.76
CCDC33-209ENST00000560565 ZNF831Q5JPB2 1677 aa10.32□□□□□ -0.76
CCDC33-209ENST00000560565 HEG1Q9ULI3 1381 aa10.32□□□□□ -0.76
CCDC33-209ENST00000560565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.32□□□□□ -0.76
CCDC33-209ENST00000560565 BTBD11A6QL63 1104 aa10.32□□□□□ -0.76
CCDC33-209ENST00000560565 ZBTB7BO15156 539 aaPredicted RBP10.32□□□□□ -0.76
CCDC33-209ENST00000560565 GNPATO15228 680 aa10.32□□□□□ -0.76
CCDC33-209ENST00000560565 CYP2E1P05181 493 aaPredicted RBP10.32□□□□□ -0.76
CCDC33-209ENST00000560565 PTMAP06454 111 aaKnown RBP10.32□□□□□ -0.76
CCDC33-209ENST00000560565 SSFA2P28290 1259 aa10.32□□□□□ -0.76
CCDC33-209ENST00000560565 SLC39A6Q13433 755 aa10.32□□□□□ -0.76
CCDC33-209ENST00000560565 UTP14CQ5TAP6 766 aaKnown RBP10.32□□□□□ -0.76
CCDC33-209ENST00000560565 RC3H1Q5TC82 1133 aaKnown RBP10.32□□□□□ -0.76
CCDC33-209ENST00000560565 CCDC30Q5VVM6 783 aa10.32□□□□□ -0.76
CCDC33-209ENST00000560565 TSPYL6Q8N831 410 aa10.32□□□□□ -0.76
CCDC33-209ENST00000560565 ATP6V1DQ9Y5K8 247 aa10.32□□□□□ -0.76
CCDC33-209ENST00000560565 TRAPPC3LQ5T215 181 aa10.31□□□□□ -0.76
CCDC33-209ENST00000560565 TTC22Q5TAA0 569 aa10.31□□□□□ -0.76
CCDC33-209ENST00000560565 TAF3Q5VWG9 929 aa10.31□□□□□ -0.76
CCDC33-209ENST00000560565 MCTP1Q6DN14 999 aa10.31□□□□□ -0.76
CCDC33-209ENST00000560565 SMIM5Q71RC9 77 aa10.31□□□□□ -0.76
CCDC33-209ENST00000560565 AMIGO3Q86WK7 504 aa10.31□□□□□ -0.76
CCDC33-209ENST00000560565 GAS2L3Q86XJ1 694 aa10.31□□□□□ -0.76
CCDC33-209ENST00000560565 TTC5Q8N0Z6 440 aa10.31□□□□□ -0.76
CCDC33-209ENST00000560565 KLRG1Q96E93 195 aa10.31□□□□□ -0.76
CCDC33-209ENST00000560565 STK31Q9BXU1 1019 aa10.31□□□□□ -0.76
CCDC33-209ENST00000560565 RTCBQ9Y3I0 505 aaKnown RBP10.31□□□□□ -0.76
CCDC33-209ENST00000560565 ERBB4Q15303 1308 aa10.31□□□□□ -0.76
CCDC33-209ENST00000560565 MYH14Q7Z406 1995 aaKnown RBP10.3□□□□□ -0.76
CCDC33-209ENST00000560565 UQCRHLA0A096LP55 91 aa10.3□□□□□ -0.76
CCDC33-209ENST00000560565 GOLGA6L6A8MZA4 724 aa10.3□□□□□ -0.76
CCDC33-209ENST00000560565 ERC2O15083 957 aa10.3□□□□□ -0.76
CCDC33-209ENST00000560565 UQCRHP07919 91 aa10.3□□□□□ -0.76
CCDC33-209ENST00000560565 EIF4A1P60842 406 aaKnown RBP10.3□□□□□ -0.76
CCDC33-209ENST00000560565 MSL1Q68DK7 614 aa10.3□□□□□ -0.76
CCDC33-209ENST00000560565 CAVIN1Q6NZI2 390 aaKnown RBP10.3□□□□□ -0.76
CCDC33-209ENST00000560565 KIF2CQ99661 725 aa10.3□□□□□ -0.76
CCDC33-209ENST00000560565 TSPY26PQ9H489 355 aa10.3□□□□□ -0.76
CCDC33-209ENST00000560565 DCTPP1Q9H773 170 aa10.3□□□□□ -0.76
CCDC33-209ENST00000560565 DIAPH3Q9NSV4 1193 aa10.3□□□□□ -0.76
CCDC33-209ENST00000560565 LMBRD1Q9NUN5 540 aa10.3□□□□□ -0.76
CCDC33-209ENST00000560565 CNTNAP4Q9C0A0 1308 aa10.3□□□□□ -0.76
CCDC33-209ENST00000560565 COL5A3P25940 1745 aaPredicted RBP10.3□□□□□ -0.76
CCDC33-209ENST00000560565 ELL2O00472 640 aaPredicted RBP10.29□□□□□ -0.76
CCDC33-209ENST00000560565 RPS6KA4O75676 772 aa10.29□□□□□ -0.76
CCDC33-209ENST00000560565 CRKLP46109 303 aaKnown RBP10.29□□□□□ -0.76
CCDC33-209ENST00000560565 GPR162Q16538 588 aa10.29□□□□□ -0.76
CCDC33-209ENST00000560565 MIS18AQ9NYP9 233 aa10.29□□□□□ -0.76
CCDC33-209ENST00000560565 R3HCC1Q9Y3T6 440 aaKnown RBP10.29□□□□□ -0.76
CCDC33-209ENST00000560565 ATP10DQ9P241 1426 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms