RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 NOGQ13253 232 aa14.08□□□□□ -0.16
APH1B-208ENST00000560353 OLFM4Q6UX06 510 aa14.08□□□□□ -0.16
APH1B-208ENST00000560353 TTC5Q8N0Z6 440 aa14.08□□□□□ -0.16
APH1B-208ENST00000560353 PIP4P2Q8N4L2 257 aa14.08□□□□□ -0.16
APH1B-208ENST00000560353 GCC1Q96CN9 775 aa14.08□□□□□ -0.16
APH1B-208ENST00000560353 PSMD1Q99460 953 aa14.08□□□□□ -0.16
APH1B-208ENST00000560353 MRC1P22897 1456 aa14.07□□□□□ -0.16
APH1B-208ENST00000560353 CAMTA2O94983 1202 aa14.07□□□□□ -0.16
APH1B-208ENST00000560353 SCN7AQ01118 1682 aa14.05□□□□□ -0.16
APH1B-208ENST00000560353 CC2D2BQ6DHV5 1058 aa14.05□□□□□ -0.16
APH1B-208ENST00000560353 CLEC4GQ6UXB4 293 aa14.05□□□□□ -0.16
APH1B-208ENST00000560353 TPTE2Q6XPS3 522 aa14.05□□□□□ -0.16
APH1B-208ENST00000560353 NBPF15Q8N660 670 aa14.05□□□□□ -0.16
APH1B-208ENST00000560353 ADARB2Q9NS39 739 aaKnown RBP14.05□□□□□ -0.16
APH1B-208ENST00000560353 CACNA1SQ13698 1873 aa14.05□□□□□ -0.16
APH1B-208ENST00000560353 TRPM7Q96QT4 1865 aa14.05□□□□□ -0.16
APH1B-208ENST00000560353 SAGE1Q9NXZ1 904 aa14.04□□□□□ -0.16
APH1B-208ENST00000560353 IL13P35225 146 aa14.03□□□□□ -0.16
APH1B-208ENST00000560353 GRIPAP1Q4V328 841 aa14.03□□□□□ -0.16
APH1B-208ENST00000560353 DZIP3Q86Y13 1208 aaKnown RBP14.03□□□□□ -0.16
APH1B-208ENST00000560353 LARGE2Q8N3Y3 721 aa14.03□□□□□ -0.16
APH1B-208ENST00000560353 ZNF496Q96IT1 587 aaPredicted RBP14.03□□□□□ -0.16
APH1B-208ENST00000560353 ZNF652Q9Y2D9 606 aa14.03□□□□□ -0.16
APH1B-208ENST00000560353 HEG1Q9ULI3 1381 aa14.02□□□□□ -0.17
APH1B-208ENST00000560353 A1BGP04217 495 aa14.02□□□□□ -0.17
APH1B-208ENST00000560353 GLIS2Q9BZE0 524 aaPredicted RBP14.02□□□□□ -0.17
APH1B-208ENST00000560353 GPRC5DQ9NZD1 345 aa14.02□□□□□ -0.17
APH1B-208ENST00000560353 PGAP2Q9UHJ9 254 aa14.02□□□□□ -0.17
APH1B-208ENST00000560353 ZNF790Q6PG37 636 aa14.01□□□□□ -0.17
APH1B-208ENST00000560353 ZC3H15Q8WU90 426 aaKnown RBP14.01□□□□□ -0.17
APH1B-208ENST00000560353 ZIC5Q96T25 663 aa14.01□□□□□ -0.17
APH1B-208ENST00000560353 ZNF408Q9H9D4 720 aa14.01□□□□□ -0.17
APH1B-208ENST00000560353 CDC37L1Q7L3B6 337 aa14□□□□□ -0.17
APH1B-208ENST00000560353 CTU1Q7Z7A3 348 aaKnown RBP14□□□□□ -0.17
APH1B-208ENST00000560353 NIM1KQ8IY84 436 aa14□□□□□ -0.17
APH1B-208ENST00000560353 UBR2Q8IWV8 1755 aa14□□□□□ -0.17
APH1B-208ENST00000560353 SNED1Q8TER0 1413 aa13.99□□□□□ -0.17
APH1B-208ENST00000560353 RGL2O15211 777 aa13.99□□□□□ -0.17
APH1B-208ENST00000560353 HUNKP57058 714 aa13.99□□□□□ -0.17
APH1B-208ENST00000560353 MTHFSDQ2M296 383 aaKnown RBP13.99□□□□□ -0.17
APH1B-208ENST00000560353 MORC1Q86VD1 984 aa13.99□□□□□ -0.17
APH1B-208ENST00000560353 FMNL2Q96PY5 1086 aa13.99□□□□□ -0.17
APH1B-208ENST00000560353 COL4A5P29400 1685 aa13.98□□□□□ -0.17
APH1B-208ENST00000560353 PRKAR2AP13861 404 aaKnown RBP13.98□□□□□ -0.17
APH1B-208ENST00000560353 GTF2E1P29083 439 aaPredicted RBP13.98□□□□□ -0.17
APH1B-208ENST00000560353 TEFQ10587 303 aa13.98□□□□□ -0.17
APH1B-208ENST00000560353 HABP4Q5JVS0 413 aaKnown RBP13.98□□□□□ -0.17
APH1B-208ENST00000560353 CCDC102AQ96A19 550 aa13.98□□□□□ -0.17
APH1B-208ENST00000560353 RNF186Q9NXI6 227 aa13.98□□□□□ -0.17
APH1B-208ENST00000560353 NIP7Q9Y221 180 aaKnown RBP eCLIP13.98□□□□□ -0.17
APH1B-208ENST00000560353 BCORQ6W2J9 1755 aa13.98□□□□□ -0.17
APH1B-208ENST00000560353 TRPA1O75762 1119 aa13.97□□□□□ -0.17
APH1B-208ENST00000560353 CRY2Q49AN0 593 aa13.97□□□□□ -0.17
APH1B-208ENST00000560353 HPS5Q9UPZ3 1129 aa13.97□□□□□ -0.17
APH1B-208ENST00000560353 FAM155AB1AL88 458 aaPredicted RBP13.96□□□□□ -0.17
APH1B-208ENST00000560353 KIF23Q02241 960 aaPredicted RBP13.96□□□□□ -0.17
APH1B-208ENST00000560353 PKN2Q16513 984 aaKnown RBP13.96□□□□□ -0.17
APH1B-208ENST00000560353 RGMBQ6NW40 437 aa13.96□□□□□ -0.17
APH1B-208ENST00000560353 VPS33BQ9H267 617 aa13.96□□□□□ -0.17
APH1B-208ENST00000560353 ZNRF3Q9ULT6 936 aa13.96□□□□□ -0.17
APH1B-208ENST00000560353 CDHR2Q9BYE9 1310 aa13.95□□□□□ -0.18
APH1B-208ENST00000560353 FAM177BA6PVY3 158 aa13.95□□□□□ -0.18
APH1B-208ENST00000560353 HMOX1P09601 288 aa13.95□□□□□ -0.18
APH1B-208ENST00000560353 HOXA10P31260 410 aaPredicted RBP13.95□□□□□ -0.18
APH1B-208ENST00000560353 GMPSP49915 693 aaPredicted RBP13.95□□□□□ -0.18
APH1B-208ENST00000560353 CXCL9Q07325 125 aa13.95□□□□□ -0.18
APH1B-208ENST00000560353 RPGRQ92834 1020 aaKnown RBP13.95□□□□□ -0.18
APH1B-208ENST00000560353 POLR3GLQ9BT43 218 aa13.95□□□□□ -0.18
APH1B-208ENST00000560353 NPC1L1Q9UHC9 1359 aa13.95□□□□□ -0.18
APH1B-208ENST00000560353 PPIP5K2O43314 1243 aa13.94□□□□□ -0.18
APH1B-208ENST00000560353 HIRAP54198 1017 aaPredicted RBP13.94□□□□□ -0.18
APH1B-208ENST00000560353 ZNF157P51786 506 aaPredicted RBP13.93□□□□□ -0.18
APH1B-208ENST00000560353 USP48Q86UV5 1035 aa13.93□□□□□ -0.18
APH1B-208ENST00000560353 C2orf69Q8N8R5 385 aa13.93□□□□□ -0.18
APH1B-208ENST00000560353 IL17REQ8NFR9 667 aa13.93□□□□□ -0.18
APH1B-208ENST00000560353 BCL2L13Q9BXK5 485 aa13.93□□□□□ -0.18
APH1B-208ENST00000560353 NYXQ9GZU5 481 aa13.93□□□□□ -0.18
APH1B-208ENST00000560353 TMX4Q9H1E5 349 aaPredicted RBP13.93□□□□□ -0.18
APH1B-208ENST00000560353 PANK3Q9H999 370 aa13.93□□□□□ -0.18
APH1B-208ENST00000560353 KIF7Q2M1P5 1343 aa13.92□□□□□ -0.18
APH1B-208ENST00000560353 GNAT3A8MTJ3 354 aa13.92□□□□□ -0.18
APH1B-208ENST00000560353 PIP4K2AP48426 406 aaPredicted RBP13.92□□□□□ -0.18
APH1B-208ENST00000560353 TNIP1Q15025 636 aa13.92□□□□□ -0.18
APH1B-208ENST00000560353 CRAMP1Q96RY5 1269 aa13.92□□□□□ -0.18
APH1B-208ENST00000560353 USP16Q9Y5T5 823 aa13.92□□□□□ -0.18
APH1B-208ENST00000560353 PPEF1O14829 653 aaPredicted RBP13.91□□□□□ -0.18
APH1B-208ENST00000560353 AOC3Q16853 763 aa13.91□□□□□ -0.18
APH1B-208ENST00000560353 SUPT20HQ8NEM7 779 aa13.91□□□□□ -0.18
APH1B-208ENST00000560353 RBM17Q96I25 401 aaKnown RBP13.91□□□□□ -0.18
APH1B-208ENST00000560353 CSRNP1Q96S65 589 aa13.91□□□□□ -0.18
APH1B-208ENST00000560353 GBA2Q9HCG7 927 aaPredicted RBP13.91□□□□□ -0.18
APH1B-208ENST00000560353 H7C1D1 291 aa13.9□□□□□ -0.18
APH1B-208ENST00000560353 TCERG1O14776 1098 aaKnown RBP13.9□□□□□ -0.18
APH1B-208ENST00000560353 TRPM4Q8TD43 1214 aa13.9□□□□□ -0.18
APH1B-208ENST00000560353 CNOT7Q9UIV1 285 aaKnown RBP13.9□□□□□ -0.18
APH1B-208ENST00000560353 HDAC9Q9UKV0 1011 aa13.9□□□□□ -0.18
APH1B-208ENST00000560353 BTBD11A6QL63 1104 aa13.89□□□□□ -0.19
APH1B-208ENST00000560353 NUTM1Q86Y26 1132 aa13.89□□□□□ -0.19
APH1B-208ENST00000560353 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
APH1B-208ENST00000560353 KCNQ3O43525 872 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms