RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PDE6BP35913 854 aa21.53■■□□□ 1.04
RPL28-209ENST00000560055 NUTM1Q86Y26 1132 aa21.53■■□□□ 1.04
RPL28-209ENST00000560055 MRPL50Q8N5N7 158 aaKnown RBP21.53■■□□□ 1.04
RPL28-209ENST00000560055 SSH1Q8WYL5 1049 aa21.53■■□□□ 1.04
RPL28-209ENST00000560055 UTP14AQ9BVJ6 771 aaKnown RBP21.53■■□□□ 1.04
RPL28-209ENST00000560055 RIC1Q4ADV7 1423 aa21.53■■□□□ 1.04
RPL28-209ENST00000560055 RNF123Q5XPI4 1314 aa21.53■■□□□ 1.04
RPL28-209ENST00000560055 BRCA1P38398 1863 aaKnown RBP21.52■■□□□ 1.04
RPL28-209ENST00000560055 ATP5J2-PTCD1G3V325 749 aa21.52■■□□□ 1.04
RPL28-209ENST00000560055 ALDH1L2Q3SY69 923 aa21.52■■□□□ 1.04
RPL28-209ENST00000560055 ERFEQ4G0M1 354 aa21.52■■□□□ 1.04
RPL28-209ENST00000560055 PDZRN3Q9UPQ7 1066 aa21.52■■□□□ 1.04
RPL28-209ENST00000560055 GRIN3BO60391 1043 aa21.51■■□□□ 1.03
RPL28-209ENST00000560055 FKBP5Q13451 457 aaPredicted RBP21.51■■□□□ 1.03
RPL28-209ENST00000560055 MYD88Q99836 296 aa21.51■■□□□ 1.03
RPL28-209ENST00000560055 COL11A2P13942 1736 aaPredicted RBP21.5■■□□□ 1.03
RPL28-209ENST00000560055 GTF2E1P29083 439 aaPredicted RBP21.5■■□□□ 1.03
RPL28-209ENST00000560055 SLC10A5Q5PT55 438 aa21.5■■□□□ 1.03
RPL28-209ENST00000560055 C2CD5Q86YS7 1000 aa21.5■■□□□ 1.03
RPL28-209ENST00000560055 DLEC1Q9Y238 1755 aa21.5■■□□□ 1.03
RPL28-209ENST00000560055 H0YIN7 160 aa21.49■■□□□ 1.03
RPL28-209ENST00000560055 IGKV5-2P06315 115 aa21.49■■□□□ 1.03
RPL28-209ENST00000560055 CCDC191Q8NCU4 936 aa21.49■■□□□ 1.03
RPL28-209ENST00000560055 PIM2Q9P1W9 311 aa21.49■■□□□ 1.03
RPL28-209ENST00000560055 TNRC6CQ9HCJ0 1690 aaKnown RBP21.49■■□□□ 1.03
RPL28-209ENST00000560055 SRGNP10124 158 aa21.48■■□□□ 1.03
RPL28-209ENST00000560055 CRY2Q49AN0 593 aa21.48■■□□□ 1.03
RPL28-209ENST00000560055 DNAAF4Q8WXU2 420 aa21.48■■□□□ 1.03
RPL28-209ENST00000560055 TRMT112Q9UI30 125 aaKnown RBP21.48■■□□□ 1.03
RPL28-209ENST00000560055 RARSP54136 660 aaKnown RBP21.47■■□□□ 1.03
RPL28-209ENST00000560055 BRPF1P55201 1214 aaPredicted RBP21.47■■□□□ 1.03
RPL28-209ENST00000560055 SYNE4Q8N205 404 aa21.47■■□□□ 1.03
RPL28-209ENST00000560055 BCL2L13Q9BXK5 485 aa21.47■■□□□ 1.03
RPL28-209ENST00000560055 SH3TC1Q8TE82 1336 aa21.47■■□□□ 1.03
RPL28-209ENST00000560055 F6X3S4 739 aa21.46■■□□□ 1.03
RPL28-209ENST00000560055 SMC4Q9NTJ3 1288 aa21.46■■□□□ 1.03
RPL28-209ENST00000560055 CWC25Q9NXE8 425 aaPredicted RBP21.46■■□□□ 1.03
RPL28-209ENST00000560055 PTPRCP08575 1304 aa21.46■■□□□ 1.03
RPL28-209ENST00000560055 NEURL1BA8MQ27 555 aa21.45■■□□□ 1.02
RPL28-209ENST00000560055 NEXNQ0ZGT2 675 aa21.45■■□□□ 1.02
RPL28-209ENST00000560055 DALRD3Q5D0E6 543 aaKnown RBP21.45■■□□□ 1.02
RPL28-209ENST00000560055 STYK1Q6J9G0 422 aa21.45■■□□□ 1.02
RPL28-209ENST00000560055 C3orf67Q6ZVT6 689 aa21.45■■□□□ 1.02
RPL28-209ENST00000560055 ZBTB38Q8NAP3 1195 aaPredicted RBP21.45■■□□□ 1.02
RPL28-209ENST00000560055 FAM89AQ96GI7 184 aa21.45■■□□□ 1.02
RPL28-209ENST00000560055 CWF19L2Q2TBE0 894 aaKnown RBP21.44■■□□□ 1.02
RPL28-209ENST00000560055 LINS1Q8NG48 757 aa21.44■■□□□ 1.02
RPL28-209ENST00000560055 MASTLQ96GX5 879 aa21.44■■□□□ 1.02
RPL28-209ENST00000560055 BCS1LQ9Y276 419 aa21.44■■□□□ 1.02
RPL28-209ENST00000560055 NPR1P16066 1061 aa21.43■■□□□ 1.02
RPL28-209ENST00000560055 BEND3Q5T5X7 828 aa21.43■■□□□ 1.02
RPL28-209ENST00000560055 TTLL6Q8N841 843 aa21.43■■□□□ 1.02
RPL28-209ENST00000560055 PCCAP05165 728 aaPredicted RBP21.42■■□□□ 1.02
RPL28-209ENST00000560055 HCLS1P14317 486 aaPredicted RBP21.42■■□□□ 1.02
RPL28-209ENST00000560055 ZNF622Q969S3 477 aaKnown RBP eCLIP21.42■■□□□ 1.02
RPL28-209ENST00000560055 NLRP3Q96P20 1036 aa21.42■■□□□ 1.02
RPL28-209ENST00000560055 ARFGEF1Q9Y6D6 1849 aa21.41■■□□□ 1.02
RPL28-209ENST00000560055 HOXA10P31260 410 aaPredicted RBP21.41■■□□□ 1.02
RPL28-209ENST00000560055 CNKSR1Q969H4 720 aa21.41■■□□□ 1.02
RPL28-209ENST00000560055 DDX60Q8IY21 1712 aaKnown RBP21.41■■□□□ 1.02
RPL28-209ENST00000560055 IRS4O14654 1257 aaPredicted RBP21.4■■□□□ 1.02
RPL28-209ENST00000560055 GCKRQ14397 625 aa21.4■■□□□ 1.02
RPL28-209ENST00000560055 RTL5Q5HYW3 569 aaPredicted RBP21.4■■□□□ 1.02
RPL28-209ENST00000560055 CDHR2Q9BYE9 1310 aa21.39■■□□□ 1.01
RPL28-209ENST00000560055 LAMB2P55268 1798 aa21.38■■□□□ 1.01
RPL28-209ENST00000560055 H7C1W4 665 aa21.38■■□□□ 1.01
RPL28-209ENST00000560055 PRPF40BQ6NWY9 871 aaKnown RBP21.38■■□□□ 1.01
RPL28-209ENST00000560055 NOB1Q9ULX3 412 aaKnown RBP21.38■■□□□ 1.01
RPL28-209ENST00000560055 KIF16BQ96L93 1317 aa21.37■■□□□ 1.01
RPL28-209ENST00000560055 SLX4Q8IY92 1834 aa21.37■■□□□ 1.01
RPL28-209ENST00000560055 CASP7P55210 303 aa21.37■■□□□ 1.01
RPL28-209ENST00000560055 SF3B3Q15393 1217 aaKnown RBP21.37■■□□□ 1.01
RPL28-209ENST00000560055 JARID2Q92833 1246 aaPredicted RBP21.37■■□□□ 1.01
RPL28-209ENST00000560055 RPGRQ92834 1020 aaKnown RBP21.37■■□□□ 1.01
RPL28-209ENST00000560055 CRAMP1Q96RY5 1269 aa21.37■■□□□ 1.01
RPL28-209ENST00000560055 BCAR3O75815 825 aa21.36■■□□□ 1.01
RPL28-209ENST00000560055 ALDH1L1O75891 902 aa21.36■■□□□ 1.01
RPL28-209ENST00000560055 HSP90B1P14625 803 aaKnown RBP21.36■■□□□ 1.01
RPL28-209ENST00000560055 ALDH1B1P30837 517 aa21.36■■□□□ 1.01
RPL28-209ENST00000560055 SLC4A10Q6U841 1118 aa21.36■■□□□ 1.01
RPL28-209ENST00000560055 C7orf43Q8WVR3 580 aa21.36■■□□□ 1.01
RPL28-209ENST00000560055 C1QTNF8P60827 252 aa21.35■■□□□ 1.01
RPL28-209ENST00000560055 ARHGAP45Q92619 1136 aa21.35■■□□□ 1.01
RPL28-209ENST00000560055 RBM17Q96I25 401 aaKnown RBP21.35■■□□□ 1.01
RPL28-209ENST00000560055 SRCIN1Q9C0H9 1055 aa21.35■■□□□ 1.01
RPL28-209ENST00000560055 PDE8AO60658 829 aa21.34■■□□□ 1.01
RPL28-209ENST00000560055 UBE3BQ7Z3V4 1068 aa21.34■■□□□ 1.01
RPL28-209ENST00000560055 ZNF526Q8TF50 670 aaPredicted RBP21.33■■□□□ 1.01
RPL28-209ENST00000560055 PLA2G12BQ9BX93 195 aa21.33■■□□□ 1.01
RPL28-209ENST00000560055 API5Q9BZZ5 524 aaKnown RBP21.33■■□□□ 1.01
RPL28-209ENST00000560055 ABCC4O15439 1325 aa21.32■■□□□ 1
RPL28-209ENST00000560055 GRM8O00222 908 aa21.32■■□□□ 1
RPL28-209ENST00000560055 C21orf2O43822 256 aa21.32■■□□□ 1
RPL28-209ENST00000560055 SNED1Q8TER0 1413 aa21.31■■□□□ 1
RPL28-209ENST00000560055 CACNA1SQ13698 1873 aa21.31■■□□□ 1
RPL28-209ENST00000560055 CTSWP56202 376 aa21.31■■□□□ 1
RPL28-209ENST00000560055 ARHGAP27Q6ZUM4 889 aa21.31■■□□□ 1
RPL28-209ENST00000560055 DDX46Q7L014 1031 aaKnown RBP21.31■■□□□ 1
RPL28-209ENST00000560055 UTYO14607 1347 aa21.3■■□□□ 1
RPL28-209ENST00000560055 TRIM27P14373 513 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms