RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ELOA3Q8NG57 546 aa7.65□□□□□ -1.18
SPG11-218ENST00000559754 PBXIP1Q96AQ6 731 aa7.65□□□□□ -1.18
SPG11-218ENST00000559754 ADARB2-AS1A8MUL3 147 aa7.64□□□□□ -1.19
SPG11-218ENST00000559754 GNB5O14775 395 aa7.64□□□□□ -1.19
SPG11-218ENST00000559754 SRPK2P78362 688 aaKnown RBP7.64□□□□□ -1.19
SPG11-218ENST00000559754 MYO19Q96H55 970 aa7.64□□□□□ -1.19
SPG11-218ENST00000559754 SLC30A3Q99726 388 aa7.64□□□□□ -1.19
SPG11-218ENST00000559754 IGHA1P01876 353 aa7.63□□□□□ -1.19
SPG11-218ENST00000559754 DGKGP49619 791 aa7.63□□□□□ -1.19
SPG11-218ENST00000559754 TNFRSF25Q93038 417 aa7.63□□□□□ -1.19
SPG11-218ENST00000559754 DCAF5Q96JK2 942 aa7.63□□□□□ -1.19
SPG11-218ENST00000559754 NOP53Q9NZM5 478 aaKnown RBP7.63□□□□□ -1.19
SPG11-218ENST00000559754 ZMIZ1Q9ULJ6 1067 aa7.63□□□□□ -1.19
SPG11-218ENST00000559754 HOXB4P17483 251 aaPredicted RBP7.62□□□□□ -1.19
SPG11-218ENST00000559754 DGKZQ13574 1117 aa7.62□□□□□ -1.19
SPG11-218ENST00000559754 GRIN2CQ14957 1233 aa7.62□□□□□ -1.19
SPG11-218ENST00000559754 C11orf91Q3C1V1 193 aa7.62□□□□□ -1.19
SPG11-218ENST00000559754 LINC00114Q6XXX2 140 aa7.62□□□□□ -1.19
SPG11-218ENST00000559754 QTRT2Q9H974 415 aaKnown RBP7.62□□□□□ -1.19
SPG11-218ENST00000559754 PRMT3O60678 531 aa7.61□□□□□ -1.19
SPG11-218ENST00000559754 STK32AQ8WU08 396 aa7.61□□□□□ -1.19
SPG11-218ENST00000559754 PNMA5Q96PV4 448 aa7.61□□□□□ -1.19
SPG11-218ENST00000559754 KLK14Q9P0G3 267 aa7.61□□□□□ -1.19
SPG11-218ENST00000559754 ARID3CA6NKF2 412 aa7.6□□□□□ -1.19
SPG11-218ENST00000559754 ARSDP51689 593 aa7.6□□□□□ -1.19
SPG11-218ENST00000559754 FKBP5Q13451 457 aaPredicted RBP7.6□□□□□ -1.19
SPG11-218ENST00000559754 C14orf37Q86TY3 774 aa7.6□□□□□ -1.19
SPG11-218ENST00000559754 BHMTQ93088 406 aa7.6□□□□□ -1.19
SPG11-218ENST00000559754 COL26A1Q96A83 441 aa7.6□□□□□ -1.19
SPG11-218ENST00000559754 PRIMPOLQ96LW4 560 aa7.6□□□□□ -1.19
SPG11-218ENST00000559754 MDFIQ99750 246 aa7.6□□□□□ -1.19
SPG11-218ENST00000559754 C11orf16Q9NQ32 467 aa7.6□□□□□ -1.19
SPG11-218ENST00000559754 DMGDHQ9UI17 866 aaKnown RBP7.6□□□□□ -1.19
SPG11-218ENST00000559754 BCS1LQ9Y276 419 aa7.6□□□□□ -1.19
SPG11-218ENST00000559754 IDH3AP50213 366 aa7.59□□□□□ -1.19
SPG11-218ENST00000559754 FAM69CQ0P6D2 419 aa7.59□□□□□ -1.19
SPG11-218ENST00000559754 CCINQ13939 588 aa7.59□□□□□ -1.19
SPG11-218ENST00000559754 GPAT2Q6NUI2 795 aa7.59□□□□□ -1.19
SPG11-218ENST00000559754 RAB44Q7Z6P3 723 aaPredicted RBP7.59□□□□□ -1.19
SPG11-218ENST00000559754 SPDYE3A6NKU9 549 aa7.58□□□□□ -1.2
SPG11-218ENST00000559754 PTCD1O75127 700 aaKnown RBP7.58□□□□□ -1.2
SPG11-218ENST00000559754 MICAL2O94851 1124 aa7.58□□□□□ -1.2
SPG11-218ENST00000559754 INPP5BP32019 993 aa7.58□□□□□ -1.2
SPG11-218ENST00000559754 ADH7P40394 386 aa7.58□□□□□ -1.2
SPG11-218ENST00000559754 OCLNQ16625 522 aa7.58□□□□□ -1.2
SPG11-218ENST00000559754 PLA2G4EQ3MJ16 856 aa7.58□□□□□ -1.2
SPG11-218ENST00000559754 TMEM164Q5U3C3 297 aa7.58□□□□□ -1.2
SPG11-218ENST00000559754 CLP1Q92989 425 aaKnown RBP7.58□□□□□ -1.2
SPG11-218ENST00000559754 IFT43Q96FT9 208 aa7.58□□□□□ -1.2
SPG11-218ENST00000559754 GSX2Q9BZM3 304 aa7.58□□□□□ -1.2
SPG11-218ENST00000559754 UBE2OQ9C0C9 1292 aaKnown RBP7.58□□□□□ -1.2
SPG11-218ENST00000559754 CXXC1Q9P0U4 656 aaPredicted RBP7.57□□□□□ -1.2
SPG11-218ENST00000559754 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.57□□□□□ -1.2
SPG11-218ENST00000559754 COL8A1P27658 744 aa7.56□□□□□ -1.2
SPG11-218ENST00000559754 PCSK7Q16549 785 aa7.56□□□□□ -1.2
SPG11-218ENST00000559754 COX20Q5RI15 118 aa7.56□□□□□ -1.2
SPG11-218ENST00000559754 C16orf46Q6P387 395 aa7.56□□□□□ -1.2
SPG11-218ENST00000559754 ERICH6Q7L0X2 663 aa7.56□□□□□ -1.2
SPG11-218ENST00000559754 SUV39H2Q9H5I1 410 aa7.56□□□□□ -1.2
SPG11-218ENST00000559754 PRDM6Q9NQX0 595 aa7.56□□□□□ -1.2
SPG11-218ENST00000559754 LRFN2Q9ULH4 789 aa7.56□□□□□ -1.2
SPG11-218ENST00000559754 M0R082 166 aa7.55□□□□□ -1.2
SPG11-218ENST00000559754 MSTNO14793 375 aa7.55□□□□□ -1.2
SPG11-218ENST00000559754 PPP1R15AO75807 674 aaPredicted RBP7.55□□□□□ -1.2
SPG11-218ENST00000559754 BRD2P25440 801 aaKnown RBP7.55□□□□□ -1.2
SPG11-218ENST00000559754 TBC1D8BQ0IIM8 1120 aa7.55□□□□□ -1.2
SPG11-218ENST00000559754 CCDC82Q8N4S0 544 aa7.55□□□□□ -1.2
SPG11-218ENST00000559754 ZNF417Q8TAU3 575 aa7.55□□□□□ -1.2
SPG11-218ENST00000559754 ZNF587Q96SQ5 575 aaPredicted RBP7.55□□□□□ -1.2
SPG11-218ENST00000559754 KRBA1A5PL33 1030 aa7.54□□□□□ -1.2
SPG11-218ENST00000559754 NFKB1P19838 968 aa7.54□□□□□ -1.2
SPG11-218ENST00000559754 ARID4AP29374 1257 aaPredicted RBP7.54□□□□□ -1.2
SPG11-218ENST00000559754 TREML1Q86YW5 311 aa7.54□□□□□ -1.2
SPG11-218ENST00000559754 PLVAPQ9BX97 442 aa7.54□□□□□ -1.2
SPG11-218ENST00000559754 IGFLR1Q9H665 355 aa7.54□□□□□ -1.2
SPG11-218ENST00000559754 MAP3K6O95382 1288 aa7.53□□□□□ -1.2
SPG11-218ENST00000559754 MICALL1Q8N3F8 863 aa7.53□□□□□ -1.2
SPG11-218ENST00000559754 TRIM11Q96F44 468 aa7.53□□□□□ -1.2
SPG11-218ENST00000559754 MKNK1Q9BUB5 465 aa7.53□□□□□ -1.2
SPG11-218ENST00000559754 FAM13BQ9NYF5 915 aa7.53□□□□□ -1.2
SPG11-218ENST00000559754 SLC6A14Q9UN76 642 aa7.53□□□□□ -1.2
SPG11-218ENST00000559754 RTCBQ9Y3I0 505 aaKnown RBP7.53□□□□□ -1.2
SPG11-218ENST00000559754 STARD13Q9Y3M8 1113 aa7.53□□□□□ -1.2
SPG11-218ENST00000559754 OPLAHO14841 1288 aa7.52□□□□□ -1.21
SPG11-218ENST00000559754 LILRB5O75023 590 aa7.52□□□□□ -1.21
SPG11-218ENST00000559754 ALBP02768 609 aa7.52□□□□□ -1.21
SPG11-218ENST00000559754 SPATA31C1P0DKV0 1188 aa7.52□□□□□ -1.21
SPG11-218ENST00000559754 ATP2B4P23634 1241 aa7.52□□□□□ -1.21
SPG11-218ENST00000559754 GRNP28799 593 aaKnown RBP7.52□□□□□ -1.21
SPG11-218ENST00000559754 PRRT3Q5FWE3 981 aa7.52□□□□□ -1.21
SPG11-218ENST00000559754 DNAJB12Q9NXW2 375 aaKnown RBP7.52□□□□□ -1.21
SPG11-218ENST00000559754 EGFRP00533 1210 aa7.51□□□□□ -1.21
SPG11-218ENST00000559754 RARAP10276 462 aa7.51□□□□□ -1.21
SPG11-218ENST00000559754 C20orf204Q6ZNR8 217 aa7.51□□□□□ -1.21
SPG11-218ENST00000559754 SPOCK3Q9BQ16 436 aa7.51□□□□□ -1.21
SPG11-218ENST00000559754 SAP130Q9H0E3 1048 aa7.51□□□□□ -1.21
SPG11-218ENST00000559754 ITGB2P05107 769 aa7.5□□□□□ -1.21
SPG11-218ENST00000559754 DHX32Q7L7V1 743 aaKnown RBP7.5□□□□□ -1.21
SPG11-218ENST00000559754 KRT25Q7Z3Z0 450 aa7.5□□□□□ -1.21
SPG11-218ENST00000559754 RGL4Q8IZJ4 473 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms