RNA–Protein interactions for RNA: ENST00000559338.1

MEIS3-205, Transcript of Meis homeobox 3, humanhuman

TSL 5

Gene MEIS3, Length 532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-205ENST00000559338 BEGAINQ9BUH8 593 aa16.58■□□□□ 0.24
MEIS3-205ENST00000559338 SCN7AQ01118 1682 aa16.58■□□□□ 0.24
MEIS3-205ENST00000559338 CCDC88AQ3V6T2 1871 aa16.58■□□□□ 0.24
MEIS3-205ENST00000559338 CEMIPQ8WUJ3 1361 aa16.57■□□□□ 0.24
MEIS3-205ENST00000559338 CLEC4GQ6UXB4 293 aa16.57■□□□□ 0.24
MEIS3-205ENST00000559338 FMNL2Q96PY5 1086 aa16.57■□□□□ 0.24
MEIS3-205ENST00000559338 MCOLN1Q9GZU1 580 aa16.57■□□□□ 0.24
MEIS3-205ENST00000559338 NBPF26B4DH59 902 aa16.56■□□□□ 0.24
MEIS3-205ENST00000559338 NPHP1O15259 732 aa16.56■□□□□ 0.24
MEIS3-205ENST00000559338 NBPF10Q6P3W6 841 aaKnown RBP16.56■□□□□ 0.24
MEIS3-205ENST00000559338 NBPF5PQ86XG9 351 aaPredicted RBP16.56■□□□□ 0.24
MEIS3-205ENST00000559338 NBPF15Q8N660 670 aa16.56■□□□□ 0.24
MEIS3-205ENST00000559338 TSKSQ9UJT2 592 aa16.56■□□□□ 0.24
MEIS3-205ENST00000559338 TLL2Q9Y6L7 1015 aa16.56■□□□□ 0.24
MEIS3-205ENST00000559338 DICER1Q9UPY3 1922 aaKnown RBP16.56■□□□□ 0.24
MEIS3-205ENST00000559338 ADAMTSL1Q8N6G6 1762 aa16.56■□□□□ 0.24
MEIS3-205ENST00000559338 TNRC18O15417 2968 aaPredicted RBP16.55■□□□□ 0.24
MEIS3-205ENST00000559338 TMPOP42166 694 aaKnown RBP16.55■□□□□ 0.24
MEIS3-205ENST00000559338 RIPK4P57078 832 aa16.55■□□□□ 0.24
MEIS3-205ENST00000559338 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
MEIS3-205ENST00000559338 CCDC146Q8IYE0 955 aa16.55■□□□□ 0.24
MEIS3-205ENST00000559338 SCN4AP35499 1836 aa16.54■□□□□ 0.24
MEIS3-205ENST00000559338 TRAF5O00463 557 aa16.54■□□□□ 0.24
MEIS3-205ENST00000559338 AOC2O75106 756 aa16.54■□□□□ 0.24
MEIS3-205ENST00000559338 EPS15P42566 896 aa16.54■□□□□ 0.24
MEIS3-205ENST00000559338 SCNN1DP51172 638 aa16.54■□□□□ 0.24
MEIS3-205ENST00000559338 PSMD1Q99460 953 aa16.54■□□□□ 0.24
MEIS3-205ENST00000559338 FAM177BA6PVY3 158 aa16.53■□□□□ 0.24
MEIS3-205ENST00000559338 BTBD11A6QL63 1104 aa16.53■□□□□ 0.24
MEIS3-205ENST00000559338 CA12O43570 354 aa16.53■□□□□ 0.24
MEIS3-205ENST00000559338 TPTE2Q6XPS3 522 aa16.53■□□□□ 0.24
MEIS3-205ENST00000559338 PDE4DIPQ5VU43 2346 aa16.53■□□□□ 0.24
MEIS3-205ENST00000559338 SNED1Q8TER0 1413 aa16.53■□□□□ 0.24
MEIS3-205ENST00000559338 APAF1O14727 1248 aa16.52■□□□□ 0.24
MEIS3-205ENST00000559338 ALDH1B1P30837 517 aa16.52■□□□□ 0.24
MEIS3-205ENST00000559338 HLFQ16534 295 aa16.52■□□□□ 0.24
MEIS3-205ENST00000559338 PAXIP1Q6ZW49 1069 aaPredicted RBP16.52■□□□□ 0.24
MEIS3-205ENST00000559338 USP50Q70EL3 339 aaPredicted RBP16.52■□□□□ 0.24
MEIS3-205ENST00000559338 SAPCD2Q86UD0 394 aa16.52■□□□□ 0.24
MEIS3-205ENST00000559338 JDP2Q8WYK2 163 aa16.52■□□□□ 0.24
MEIS3-205ENST00000559338 COL4A5P29400 1685 aa16.52■□□□□ 0.23
MEIS3-205ENST00000559338 RGL2O15211 777 aa16.51■□□□□ 0.23
MEIS3-205ENST00000559338 GRM1Q13255 1194 aa16.51■□□□□ 0.23
MEIS3-205ENST00000559338 NPM2Q86SE8 214 aaKnown RBP16.51■□□□□ 0.23
MEIS3-205ENST00000559338 GJA3Q9Y6H8 435 aa16.51■□□□□ 0.23
MEIS3-205ENST00000559338 EIF6P56537 245 aaKnown RBP16.5■□□□□ 0.23
MEIS3-205ENST00000559338 NEUROD2Q15784 382 aa16.5■□□□□ 0.23
MEIS3-205ENST00000559338 MCM10Q7L590 875 aa16.5■□□□□ 0.23
MEIS3-205ENST00000559338 HHIPL1Q96JK4 782 aa16.5■□□□□ 0.23
MEIS3-205ENST00000559338 NIP7Q9Y221 180 aaKnown RBP eCLIP16.5■□□□□ 0.23
MEIS3-205ENST00000559338 SIPA1L3O60292 1781 aaPredicted RBP16.49■□□□□ 0.23
MEIS3-205ENST00000559338 LMOD1P29536 600 aaPredicted RBP16.49■□□□□ 0.23
MEIS3-205ENST00000559338 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
MEIS3-205ENST00000559338 DCTN1Q14203 1278 aa16.49■□□□□ 0.23
MEIS3-205ENST00000559338 CCDC27Q2M243 656 aa16.49■□□□□ 0.23
MEIS3-205ENST00000559338 CRY2Q49AN0 593 aa16.49■□□□□ 0.23
MEIS3-205ENST00000559338 CC2D2BQ6DHV5 1058 aa16.49■□□□□ 0.23
MEIS3-205ENST00000559338 BABAM1Q9NWV8 329 aa16.49■□□□□ 0.23
MEIS3-205ENST00000559338 ABCC12Q96J65 1359 aa16.49■□□□□ 0.23
MEIS3-205ENST00000559338 TAF7Q15545 349 aaPredicted RBP16.48■□□□□ 0.23
MEIS3-205ENST00000559338 CFAP44Q96MT7 982 aa16.48■□□□□ 0.23
MEIS3-205ENST00000559338 ZNF652Q9Y2D9 606 aa16.48■□□□□ 0.23
MEIS3-205ENST00000559338 SNRPA1P09661 255 aaKnown RBP16.47■□□□□ 0.23
MEIS3-205ENST00000559338 DGKZQ13574 1117 aa16.47■□□□□ 0.23
MEIS3-205ENST00000559338 PGAP2Q9UHJ9 254 aa16.47■□□□□ 0.23
MEIS3-205ENST00000559338 HOXA10P31260 410 aaPredicted RBP16.46■□□□□ 0.23
MEIS3-205ENST00000559338 NUTM1Q86Y26 1132 aa16.46■□□□□ 0.23
MEIS3-205ENST00000559338 MIS18AQ9NYP9 233 aa16.46■□□□□ 0.23
MEIS3-205ENST00000559338 RRP7AQ9Y3A4 280 aaKnown RBP16.46■□□□□ 0.23
MEIS3-205ENST00000559338 DLG5Q8TDM6 1919 aa16.46■□□□□ 0.23
MEIS3-205ENST00000559338 BCORQ6W2J9 1755 aa16.46■□□□□ 0.22
MEIS3-205ENST00000559338 THSD7BQ9C0I4 1608 aa16.45■□□□□ 0.22
MEIS3-205ENST00000559338 CELF2O95319 508 aaKnown RBP16.45■□□□□ 0.22
MEIS3-205ENST00000559338 C3orf67Q6ZVT6 689 aa16.45■□□□□ 0.22
MEIS3-205ENST00000559338 ZIC5Q96T25 663 aa16.45■□□□□ 0.22
MEIS3-205ENST00000559338 LTBP1Q14766 1721 aa16.45■□□□□ 0.22
MEIS3-205ENST00000559338 GRIPAP1Q4V328 841 aa16.44■□□□□ 0.22
MEIS3-205ENST00000559338 CIAPIN1Q6FI81 312 aa16.44■□□□□ 0.22
MEIS3-205ENST00000559338 LARGE2Q8N3Y3 721 aa16.44■□□□□ 0.22
MEIS3-205ENST00000559338 ADARB2Q9NS39 739 aaKnown RBP16.44■□□□□ 0.22
MEIS3-205ENST00000559338 GPRC5DQ9NZD1 345 aa16.44■□□□□ 0.22
MEIS3-205ENST00000559338 ARFGEF2Q9Y6D5 1785 aa16.43■□□□□ 0.22
MEIS3-205ENST00000559338 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
MEIS3-205ENST00000559338 TRIM35Q9UPQ4 493 aa16.43■□□□□ 0.22
MEIS3-205ENST00000559338 CACNA1SQ13698 1873 aa16.43■□□□□ 0.22
MEIS3-205ENST00000559338 GNAI1P63096 354 aa16.42■□□□□ 0.22
MEIS3-205ENST00000559338 TTLL7Q6ZT98 887 aa16.42■□□□□ 0.22
MEIS3-205ENST00000559338 CHMP4AQ9BY43 222 aa16.42■□□□□ 0.22
MEIS3-205ENST00000559338 GLIS2Q9BZE0 524 aaPredicted RBP16.42■□□□□ 0.22
MEIS3-205ENST00000559338 UBN2Q6ZU65 1347 aa16.42■□□□□ 0.22
MEIS3-205ENST00000559338 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
MEIS3-205ENST00000559338 HIRAP54198 1017 aaPredicted RBP16.41■□□□□ 0.22
MEIS3-205ENST00000559338 WWC1Q8IX03 1113 aa16.41■□□□□ 0.22
MEIS3-205ENST00000559338 ZC3H15Q8WU90 426 aaKnown RBP16.41■□□□□ 0.22
MEIS3-205ENST00000559338 IL16Q14005 1332 aa16.41■□□□□ 0.22
MEIS3-205ENST00000559338 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
MEIS3-205ENST00000559338 CXCL9Q07325 125 aa16.4■□□□□ 0.22
MEIS3-205ENST00000559338 NOGQ13253 232 aa16.4■□□□□ 0.22
MEIS3-205ENST00000559338 CRAMP1Q96RY5 1269 aa16.4■□□□□ 0.22
MEIS3-205ENST00000559338 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms