RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 MYD88Q99836 296 aa7.56□□□□□ -1.2
SHC4-206ENST00000559289 LAMB2P55268 1798 aa7.56□□□□□ -1.2
SHC4-206ENST00000559289 KIF13BQ9NQT8 1826 aa7.55□□□□□ -1.2
SHC4-206ENST00000559289 TNRC6CQ9HCJ0 1690 aaKnown RBP7.55□□□□□ -1.2
SHC4-206ENST00000559289 NEURL1BA8MQ27 555 aa7.55□□□□□ -1.2
SHC4-206ENST00000559289 ATP5J2-PTCD1G3V325 749 aa7.55□□□□□ -1.2
SHC4-206ENST00000559289 POLRMTO00411 1230 aaKnown RBP7.55□□□□□ -1.2
SHC4-206ENST00000559289 DDX58O95786 925 aaKnown RBP7.55□□□□□ -1.2
SHC4-206ENST00000559289 GPTP24298 496 aa7.55□□□□□ -1.2
SHC4-206ENST00000559289 PTGER2P43116 358 aa7.55□□□□□ -1.2
SHC4-206ENST00000559289 FXR2P51116 673 aaKnown RBP eCLIP7.55□□□□□ -1.2
SHC4-206ENST00000559289 RRP1P56182 461 aaKnown RBP7.55□□□□□ -1.2
SHC4-206ENST00000559289 TRIM28Q13263 835 aaKnown RBP7.55□□□□□ -1.2
SHC4-206ENST00000559289 NLRP10Q86W26 655 aa7.55□□□□□ -1.2
SHC4-206ENST00000559289 CLUAP1Q96AJ1 413 aa7.55□□□□□ -1.2
SHC4-206ENST00000559289 API5Q9BZZ5 524 aaKnown RBP7.55□□□□□ -1.2
SHC4-206ENST00000559289 MTFR1LQ9H019 292 aa7.55□□□□□ -1.2
SHC4-206ENST00000559289 NIP7Q9Y221 180 aaKnown RBP eCLIP7.55□□□□□ -1.2
SHC4-206ENST00000559289 KIAA1551Q9HCM1 1747 aa7.55□□□□□ -1.2
SHC4-206ENST00000559289 IPO8O15397 1037 aaKnown RBP7.54□□□□□ -1.2
SHC4-206ENST00000559289 NTSR2O95665 410 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 MMP10P09238 476 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 CASP7P55210 303 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 HSP90AB3PQ58FF7 597 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 SUSD4Q5VX71 490 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 INTS3Q68E01 1043 aaKnown RBP7.54□□□□□ -1.2
SHC4-206ENST00000559289 SLC4A10Q6U841 1118 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 BICDL1Q6ZP65 573 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 SYNE4Q8N205 404 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 NLGN1Q8N2Q7 840 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 TMEM57Q8N5G2 664 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 LINS1Q8NG48 757 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 PANK1Q8TE04 598 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 ATF5Q9Y2D1 282 aaPredicted RBP7.54□□□□□ -1.2
SHC4-206ENST00000559289 ZNF652Q9Y2D9 606 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 SUPT16HQ9Y5B9 1047 aaKnown RBP7.54□□□□□ -1.2
SHC4-206ENST00000559289 CARMIL3Q8ND23 1372 aa7.54□□□□□ -1.2
SHC4-206ENST00000559289 IBTKQ9P2D0 1353 aaPredicted RBP7.54□□□□□ -1.2
SHC4-206ENST00000559289 MYH3P11055 1940 aa7.53□□□□□ -1.2
SHC4-206ENST00000559289 GCKRQ14397 625 aa7.53□□□□□ -1.2
SHC4-206ENST00000559289 DZIP1LQ8IYY4 767 aaKnown RBP7.53□□□□□ -1.2
SHC4-206ENST00000559289 CCDC191Q8NCU4 936 aa7.53□□□□□ -1.2
SHC4-206ENST00000559289 SETDB2Q96T68 719 aa7.53□□□□□ -1.2
SHC4-206ENST00000559289 ABCC12Q96J65 1359 aa7.53□□□□□ -1.2
SHC4-206ENST00000559289 UTYO14607 1347 aa7.52□□□□□ -1.2
SHC4-206ENST00000559289 LRP5O75197 1615 aa7.52□□□□□ -1.2
SHC4-206ENST00000559289 COL11A2P13942 1736 aaPredicted RBP7.52□□□□□ -1.2
SHC4-206ENST00000559289 COL4A1P02462 1669 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 FAM177BA6PVY3 158 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 H7C1W4 665 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 ALDH1L1O75891 902 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 SERPINB2P05120 415 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 NEXNQ0ZGT2 675 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 PARP10Q53GL7 1025 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 PRR5LQ6MZQ0 368 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 NUTM1Q86Y26 1132 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 CCDC24Q8N4L8 307 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 JARID2Q92833 1246 aaPredicted RBP7.52□□□□□ -1.21
SHC4-206ENST00000559289 SRCIN1Q9C0H9 1055 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 USP44Q9H0E7 712 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 CWC25Q9NXE8 425 aaPredicted RBP7.52□□□□□ -1.21
SHC4-206ENST00000559289 RIC1Q4ADV7 1423 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 C10orf71Q711Q0 1435 aa7.52□□□□□ -1.21
SHC4-206ENST00000559289 DLEC1Q9Y238 1755 aa7.51□□□□□ -1.21
SHC4-206ENST00000559289 PCCAP05165 728 aaPredicted RBP7.51□□□□□ -1.21
SHC4-206ENST00000559289 NBPF7P0C2Y1 421 aaPredicted RBP7.51□□□□□ -1.21
SHC4-206ENST00000559289 CCT4P50991 539 aaKnown RBP7.51□□□□□ -1.21
SHC4-206ENST00000559289 PDE3AQ14432 1141 aa7.51□□□□□ -1.21
SHC4-206ENST00000559289 MVPQ14764 893 aaKnown RBP7.51□□□□□ -1.21
SHC4-206ENST00000559289 ERFEQ4G0M1 354 aa7.51□□□□□ -1.21
SHC4-206ENST00000559289 PPP1R42Q7Z4L9 355 aa7.51□□□□□ -1.21
SHC4-206ENST00000559289 ZBTB38Q8NAP3 1195 aaPredicted RBP7.51□□□□□ -1.21
SHC4-206ENST00000559289 FAM89AQ96GI7 184 aa7.51□□□□□ -1.21
SHC4-206ENST00000559289 KAZALD1Q96I82 304 aa7.51□□□□□ -1.21
SHC4-206ENST00000559289 MEIS3Q99687 375 aa7.51□□□□□ -1.21
SHC4-206ENST00000559289 UTP14AQ9BVJ6 771 aaKnown RBP7.51□□□□□ -1.21
SHC4-206ENST00000559289 COG6Q9Y2V7 657 aa7.51□□□□□ -1.21
SHC4-206ENST00000559289 PARP3Q9Y6F1 533 aa7.51□□□□□ -1.21
SHC4-206ENST00000559289 TAF1P21675 1872 aa7.51□□□□□ -1.21
SHC4-206ENST00000559289 BRCA1P38398 1863 aaKnown RBP7.51□□□□□ -1.21
SHC4-206ENST00000559289 CDHR2Q9BYE9 1310 aa7.51□□□□□ -1.21
SHC4-206ENST00000559289 GRM8O00222 908 aa7.5□□□□□ -1.21
SHC4-206ENST00000559289 ZBTB7BO15156 539 aaPredicted RBP7.5□□□□□ -1.21
SHC4-206ENST00000559289 CENPBP07199 599 aaPredicted RBP7.5□□□□□ -1.21
SHC4-206ENST00000559289 PRKCSHP14314 528 aaPredicted RBP7.5□□□□□ -1.21
SHC4-206ENST00000559289 HCLS1P14317 486 aaPredicted RBP7.5□□□□□ -1.21
SHC4-206ENST00000559289 RTL5Q5HYW3 569 aaPredicted RBP7.5□□□□□ -1.21
SHC4-206ENST00000559289 EPHA10Q5JZY3 1008 aa7.5□□□□□ -1.21
SHC4-206ENST00000559289 SLC10A5Q5PT55 438 aa7.5□□□□□ -1.21
SHC4-206ENST00000559289 C3orf67Q6ZVT6 689 aa7.5□□□□□ -1.21
SHC4-206ENST00000559289 UBE3BQ7Z3V4 1068 aa7.5□□□□□ -1.21
SHC4-206ENST00000559289 NBPF5PQ86XG9 351 aaPredicted RBP7.5□□□□□ -1.21
SHC4-206ENST00000559289 FTSJ3Q8IY81 847 aaKnown RBP7.5□□□□□ -1.21
SHC4-206ENST00000559289 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.5□□□□□ -1.21
SHC4-206ENST00000559289 SUCLG2Q96I99 432 aa7.5□□□□□ -1.21
SHC4-206ENST00000559289 NYXQ9GZU5 481 aa7.5□□□□□ -1.21
SHC4-206ENST00000559289 SPON1Q9HCB6 807 aa7.5□□□□□ -1.21
SHC4-206ENST00000559289 TRMT112Q9UI30 125 aaKnown RBP7.5□□□□□ -1.21
SHC4-206ENST00000559289 SH3TC1Q8TE82 1336 aa7.5□□□□□ -1.21
SHC4-206ENST00000559289 CACNA1SQ13698 1873 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms