RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 TBCELQ5QJ74 424 aa8.18□□□□□ -1.1
CASC4-207ENST00000559037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.18□□□□□ -1.1
CASC4-207ENST00000559037 ZMIZ1Q9ULJ6 1067 aa8.18□□□□□ -1.1
CASC4-207ENST00000559037 PARP3Q9Y6F1 533 aa8.18□□□□□ -1.1
CASC4-207ENST00000559037 EEA1Q15075 1411 aa8.18□□□□□ -1.1
CASC4-207ENST00000559037 PLB1Q6P1J6 1458 aa8.18□□□□□ -1.1
CASC4-207ENST00000559037 GLI2P10070 1586 aa8.18□□□□□ -1.1
CASC4-207ENST00000559037 ZCCHC11Q5TAX3 1644 aaKnown RBP8.18□□□□□ -1.1
CASC4-207ENST00000559037 PPRC1Q5VV67 1664 aaKnown RBP8.18□□□□□ -1.1
CASC4-207ENST00000559037 FAM157BP0CG42 384 aa8.17□□□□□ -1.1
CASC4-207ENST00000559037 MX2P20592 715 aa8.17□□□□□ -1.1
CASC4-207ENST00000559037 MAP2K3P46734 347 aa8.17□□□□□ -1.1
CASC4-207ENST00000559037 LAMC2Q13753 1193 aa8.17□□□□□ -1.1
CASC4-207ENST00000559037 CDCA8Q53HL2 280 aa8.17□□□□□ -1.1
CASC4-207ENST00000559037 RNFT1Q5M7Z0 435 aa8.17□□□□□ -1.1
CASC4-207ENST00000559037 RHPN1Q8TCX5 695 aa8.17□□□□□ -1.1
CASC4-207ENST00000559037 C1orf115Q9H7X2 142 aa8.17□□□□□ -1.1
CASC4-207ENST00000559037 NEUROD4Q9HD90 331 aa8.17□□□□□ -1.1
CASC4-207ENST00000559037 NDFIP2Q9NV92 336 aa8.17□□□□□ -1.1
CASC4-207ENST00000559037 ASXL2Q76L83 1435 aa8.17□□□□□ -1.1
CASC4-207ENST00000559037 ABCA8O94911 1581 aa8.17□□□□□ -1.1
CASC4-207ENST00000559037 ATXN7O15265 892 aaPredicted RBP8.16□□□□□ -1.1
CASC4-207ENST00000559037 LRRC4BQ9NT99 713 aa8.16□□□□□ -1.1
CASC4-207ENST00000559037 TIMELESSQ9UNS1 1208 aa8.16□□□□□ -1.1
CASC4-207ENST00000559037 GPR25O00155 361 aa8.15□□□□□ -1.1
CASC4-207ENST00000559037 RTN1Q16799 776 aa8.15□□□□□ -1.1
CASC4-207ENST00000559037 FAM182BQ5T319 152 aa8.15□□□□□ -1.1
CASC4-207ENST00000559037 VTI1AQ96AJ9 217 aa8.15□□□□□ -1.1
CASC4-207ENST00000559037 ZCCHC2Q9C0B9 1178 aaKnown RBP8.15□□□□□ -1.1
CASC4-207ENST00000559037 PHACTR1Q9C0D0 580 aa8.15□□□□□ -1.1
CASC4-207ENST00000559037 MAP3K4Q9Y6R4 1608 aa8.14□□□□□ -1.11
CASC4-207ENST00000559037 SAMD9Q5K651 1589 aa8.14□□□□□ -1.11
CASC4-207ENST00000559037 ADAMTS2O95450 1211 aa8.14□□□□□ -1.11
CASC4-207ENST00000559037 FGFR3P22607 806 aa8.14□□□□□ -1.11
CASC4-207ENST00000559037 ALDH16A1Q8IZ83 802 aa8.14□□□□□ -1.11
CASC4-207ENST00000559037 STK32AQ8WU08 396 aa8.14□□□□□ -1.11
CASC4-207ENST00000559037 C7orf43Q8WVR3 580 aa8.14□□□□□ -1.11
CASC4-207ENST00000559037 CLP1Q92989 425 aaKnown RBP8.14□□□□□ -1.11
CASC4-207ENST00000559037 COL26A1Q96A83 441 aa8.14□□□□□ -1.11
CASC4-207ENST00000559037 KIF21BO75037 1637 aa8.14□□□□□ -1.11
CASC4-207ENST00000559037 EPRSP07814 1512 aaKnown RBP8.13□□□□□ -1.11
CASC4-207ENST00000559037 BNIP3LO60238 219 aa8.13□□□□□ -1.11
CASC4-207ENST00000559037 TMEM164Q5U3C3 297 aa8.13□□□□□ -1.11
CASC4-207ENST00000559037 IER5Q5VY09 327 aa8.13□□□□□ -1.11
CASC4-207ENST00000559037 FAM9AQ8IZU1 332 aaPredicted RBP8.13□□□□□ -1.11
CASC4-207ENST00000559037 ABHD17AQ96GS6 310 aa8.13□□□□□ -1.11
CASC4-207ENST00000559037 KDM6BO15054 1643 aa8.12□□□□□ -1.11
CASC4-207ENST00000559037 LORP23490 312 aaPredicted RBP8.12□□□□□ -1.11
CASC4-207ENST00000559037 SH3PXD2AQ5TCZ1 1133 aa8.12□□□□□ -1.11
CASC4-207ENST00000559037 AVENQ9NQS1 362 aaPredicted RBP8.12□□□□□ -1.11
CASC4-207ENST00000559037 HCN4Q9Y3Q4 1203 aa8.12□□□□□ -1.11
CASC4-207ENST00000559037 EFSO43281 561 aa8.11□□□□□ -1.11
CASC4-207ENST00000559037 MAPTP10636 758 aaKnown RBP8.11□□□□□ -1.11
CASC4-207ENST00000559037 TNP2Q05952 138 aa8.11□□□□□ -1.11
CASC4-207ENST00000559037 LRRC69Q6ZNQ3 347 aa8.11□□□□□ -1.11
CASC4-207ENST00000559037 MYO19Q96H55 970 aa8.11□□□□□ -1.11
CASC4-207ENST00000559037 GDF2Q9UK05 429 aaPredicted RBP8.11□□□□□ -1.11
CASC4-207ENST00000559037 ATP10BO94823 1461 aa8.11□□□□□ -1.11
CASC4-207ENST00000559037 KHNYNO15037 678 aaKnown RBP8.1□□□□□ -1.11
CASC4-207ENST00000559037 PTCD1O75127 700 aaKnown RBP8.1□□□□□ -1.11
CASC4-207ENST00000559037 BMP4P12644 408 aa8.1□□□□□ -1.11
CASC4-207ENST00000559037 MAP3K10Q02779 954 aa8.1□□□□□ -1.11
CASC4-207ENST00000559037 OCLNQ16625 522 aa8.1□□□□□ -1.11
CASC4-207ENST00000559037 ENAMQ9NRM1 1142 aa8.1□□□□□ -1.11
CASC4-207ENST00000559037 WDR7Q9Y4E6 1490 aa8.1□□□□□ -1.11
CASC4-207ENST00000559037 CFAP43Q8NDM7 1665 aa8.1□□□□□ -1.11
CASC4-207ENST00000559037 KCNQ4P56696 695 aa8.09□□□□□ -1.11
CASC4-207ENST00000559037 SVOPQ8N4V2 548 aa8.09□□□□□ -1.11
CASC4-207ENST00000559037 GOLGA6L1Q8N7Z2 621 aa8.09□□□□□ -1.11
CASC4-207ENST00000559037 SUSD3Q96L08 255 aa8.09□□□□□ -1.11
CASC4-207ENST00000559037 OXCT2Q9BYC2 517 aaPredicted RBP8.09□□□□□ -1.11
CASC4-207ENST00000559037 MARK1Q9P0L2 795 aa8.09□□□□□ -1.11
CASC4-207ENST00000559037 CXXC1Q9P0U4 656 aaPredicted RBP8.09□□□□□ -1.11
CASC4-207ENST00000559037 RAPGEF6Q8TEU7 1601 aa8.09□□□□□ -1.11
CASC4-207ENST00000559037 COL17A1Q9UMD9 1497 aaPredicted RBP8.08□□□□□ -1.12
CASC4-207ENST00000559037 DCDC2BA2VCK2 349 aa8.08□□□□□ -1.12
CASC4-207ENST00000559037 TGFBR3LH3BV60 316 aa8.08□□□□□ -1.12
CASC4-207ENST00000559037 PRMT3O60678 531 aa8.08□□□□□ -1.12
CASC4-207ENST00000559037 ARAFP10398 606 aa8.08□□□□□ -1.12
CASC4-207ENST00000559037 ZNF385CQ66K41 422 aaPredicted RBP8.08□□□□□ -1.12
CASC4-207ENST00000559037 NGLY1Q96IV0 654 aa8.08□□□□□ -1.12
CASC4-207ENST00000559037 USTQ9Y2C2 406 aa8.08□□□□□ -1.12
CASC4-207ENST00000559037 BCRP11274 1271 aa8.07□□□□□ -1.12
CASC4-207ENST00000559037 FKBP5Q13451 457 aaPredicted RBP8.07□□□□□ -1.12
CASC4-207ENST00000559037 KLRG1Q96E93 195 aa8.07□□□□□ -1.12
CASC4-207ENST00000559037 QTRT2Q9H974 415 aaKnown RBP8.07□□□□□ -1.12
CASC4-207ENST00000559037 EFCC1Q9HA90 598 aa8.07□□□□□ -1.12
CASC4-207ENST00000559037 TEX14Q8IWB6 1497 aa8.06□□□□□ -1.12
CASC4-207ENST00000559037 CD109Q6YHK3 1445 aa8.06□□□□□ -1.12
CASC4-207ENST00000559037 CELA2BP08218 269 aaPredicted RBP8.06□□□□□ -1.12
CASC4-207ENST00000559037 EPB42P16452 691 aa8.06□□□□□ -1.12
CASC4-207ENST00000559037 TYRO3Q06418 890 aa8.06□□□□□ -1.12
CASC4-207ENST00000559037 PDE4CQ08493 712 aa8.06□□□□□ -1.12
CASC4-207ENST00000559037 NEUROD1Q13562 356 aa8.06□□□□□ -1.12
CASC4-207ENST00000559037 SLCO4C1Q6ZQN7 724 aa8.06□□□□□ -1.12
CASC4-207ENST00000559037 BTLAQ7Z6A9 289 aa8.06□□□□□ -1.12
CASC4-207ENST00000559037 PRIMPOLQ96LW4 560 aa8.06□□□□□ -1.12
CASC4-207ENST00000559037 CEP63Q96MT8 703 aa8.06□□□□□ -1.12
CASC4-207ENST00000559037 C11orf16Q9NQ32 467 aa8.06□□□□□ -1.12
CASC4-207ENST00000559037 EFCAB5A4FU69 1503 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms