RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 SOGA3Q5TF21 947 aa14.56□□□□□ -0.08
BMP4-204ENST00000558961 NUTM1Q86Y26 1132 aa14.56□□□□□ -0.08
BMP4-204ENST00000558961 PLBD2Q8NHP8 589 aa14.56□□□□□ -0.08
BMP4-204ENST00000558961 RNF181Q9P0P0 153 aa14.56□□□□□ -0.08
BMP4-204ENST00000558961 C21orf2O43822 256 aa14.55□□□□□ -0.08
BMP4-204ENST00000558961 GTF2E1P29083 439 aaPredicted RBP14.55□□□□□ -0.08
BMP4-204ENST00000558961 AIMP1Q12904 312 aaKnown RBP14.55□□□□□ -0.08
BMP4-204ENST00000558961 TCIRG1Q13488 830 aa14.55□□□□□ -0.08
BMP4-204ENST00000558961 NLRP10Q86W26 655 aa14.55□□□□□ -0.08
BMP4-204ENST00000558961 C8orf58Q8NAV2 365 aa14.55□□□□□ -0.08
BMP4-204ENST00000558961 HOXA10P31260 410 aaPredicted RBP14.54□□□□□ -0.08
BMP4-204ENST00000558961 SLC10A5Q5PT55 438 aa14.54□□□□□ -0.08
BMP4-204ENST00000558961 CHMP4AQ9BY43 222 aa14.54□□□□□ -0.08
BMP4-204ENST00000558961 LRRC37AA6NMS7 1700 aa14.54□□□□□ -0.08
BMP4-204ENST00000558961 WDR90Q96KV7 1748 aa14.53□□□□□ -0.08
BMP4-204ENST00000558961 KIF3CO14782 793 aa14.53□□□□□ -0.08
BMP4-204ENST00000558961 ALDH1B1P30837 517 aa14.53□□□□□ -0.08
BMP4-204ENST00000558961 ANKRD13DQ6ZTN6 518 aa14.53□□□□□ -0.08
BMP4-204ENST00000558961 WDR63Q8IWG1 891 aa14.53□□□□□ -0.08
BMP4-204ENST00000558961 TSPYL6Q8N831 410 aa14.53□□□□□ -0.08
BMP4-204ENST00000558961 ZNF526Q8TF50 670 aaPredicted RBP14.53□□□□□ -0.08
BMP4-204ENST00000558961 TSR2Q969E8 191 aaKnown RBP14.53□□□□□ -0.08
BMP4-204ENST00000558961 ISCA1Q9BUE6 129 aa14.53□□□□□ -0.08
BMP4-204ENST00000558961 UTP14AQ9BVJ6 771 aaKnown RBP14.53□□□□□ -0.08
BMP4-204ENST00000558961 CCDC93Q567U6 631 aa14.52□□□□□ -0.09
BMP4-204ENST00000558961 CCDC30Q5VVM6 783 aa14.52□□□□□ -0.09
BMP4-204ENST00000558961 TAOK3Q9H2K8 898 aa14.52□□□□□ -0.09
BMP4-204ENST00000558961 KDM2BQ8NHM5 1336 aa14.51□□□□□ -0.09
BMP4-204ENST00000558961 FANCIQ9NVI1 1328 aa14.51□□□□□ -0.09
BMP4-204ENST00000558961 ELL2O00472 640 aaPredicted RBP14.51□□□□□ -0.09
BMP4-204ENST00000558961 TRIM28Q13263 835 aaKnown RBP14.51□□□□□ -0.09
BMP4-204ENST00000558961 C3orf67Q6ZVT6 689 aa14.51□□□□□ -0.09
BMP4-204ENST00000558961 CRAMP1Q96RY5 1269 aa14.51□□□□□ -0.09
BMP4-204ENST00000558961 PHAXQ9H814 394 aaKnown RBP14.51□□□□□ -0.09
BMP4-204ENST00000558961 SH3TC1Q8TE82 1336 aa14.5□□□□□ -0.09
BMP4-204ENST00000558961 RPGRQ92834 1020 aaKnown RBP14.5□□□□□ -0.09
BMP4-204ENST00000558961 NLRP3Q96P20 1036 aa14.5□□□□□ -0.09
BMP4-204ENST00000558961 ZNF219Q9P2Y4 722 aaPredicted RBP14.5□□□□□ -0.09
BMP4-204ENST00000558961 ZNF521Q96K83 1311 aa14.49□□□□□ -0.09
BMP4-204ENST00000558961 TAF1P21675 1872 aa14.49□□□□□ -0.09
BMP4-204ENST00000558961 SENP3-EIF4A1A0A087X0R7 540 aa14.49□□□□□ -0.09
BMP4-204ENST00000558961 FKBP4Q02790 459 aaKnown RBP eCLIP14.49□□□□□ -0.09
BMP4-204ENST00000558961 GOLGA2Q08379 1002 aa14.49□□□□□ -0.09
BMP4-204ENST00000558961 TWISTNBQ3B726 338 aaPredicted RBP14.49□□□□□ -0.09
BMP4-204ENST00000558961 CC2D2BQ6DHV5 1058 aa14.49□□□□□ -0.09
BMP4-204ENST00000558961 FAM9BQ8IZU0 186 aa14.49□□□□□ -0.09
BMP4-204ENST00000558961 NMRK2Q9NPI5 230 aa14.49□□□□□ -0.09
BMP4-204ENST00000558961 GLTPD2A6NH11 291 aa14.48□□□□□ -0.09
BMP4-204ENST00000558961 RTKN2Q8IZC4 609 aa14.48□□□□□ -0.09
BMP4-204ENST00000558961 PSMD1Q99460 953 aa14.48□□□□□ -0.09
BMP4-204ENST00000558961 TRMT112Q9UI30 125 aaKnown RBP14.48□□□□□ -0.09
BMP4-204ENST00000558961 MYH3P11055 1940 aa14.48□□□□□ -0.09
BMP4-204ENST00000558961 LTBP1Q14766 1721 aa14.47□□□□□ -0.09
BMP4-204ENST00000558961 GRIPAP1Q4V328 841 aa14.47□□□□□ -0.09
BMP4-204ENST00000558961 OLFM4Q6UX06 510 aa14.47□□□□□ -0.09
BMP4-204ENST00000558961 SYNE4Q8N205 404 aa14.47□□□□□ -0.09
BMP4-204ENST00000558961 RBM17Q96I25 401 aaKnown RBP14.47□□□□□ -0.09
BMP4-204ENST00000558961 ABCC4O15439 1325 aa14.46□□□□□ -0.09
BMP4-204ENST00000558961 COL4A1P02462 1669 aa14.46□□□□□ -0.09
BMP4-204ENST00000558961 COL4A5P29400 1685 aa14.46□□□□□ -0.09
BMP4-204ENST00000558961 SCN4AP35499 1836 aa14.46□□□□□ -0.09
BMP4-204ENST00000558961 TOMM70O94826 608 aa14.46□□□□□ -0.09
BMP4-204ENST00000558961 DDX58O95786 925 aaKnown RBP14.46□□□□□ -0.09
BMP4-204ENST00000558961 RIC3Q7Z5B4 369 aa14.46□□□□□ -0.09
BMP4-204ENST00000558961 STK31Q9BXU1 1019 aa14.46□□□□□ -0.09
BMP4-204ENST00000558961 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
BMP4-204ENST00000558961 DUOX1Q9NRD9 1551 aa14.46□□□□□ -0.09
BMP4-204ENST00000558961 ATP5J2-PTCD1G3V325 749 aa14.45□□□□□ -0.1
BMP4-204ENST00000558961 PPEF1O14829 653 aaPredicted RBP14.45□□□□□ -0.1
BMP4-204ENST00000558961 HCLS1P14317 486 aaPredicted RBP14.45□□□□□ -0.1
BMP4-204ENST00000558961 CCDC191Q8NCU4 936 aa14.45□□□□□ -0.1
BMP4-204ENST00000558961 METTL22Q9BUU2 404 aaPredicted RBP14.45□□□□□ -0.1
BMP4-204ENST00000558961 VAMP4O75379 141 aa14.44□□□□□ -0.1
BMP4-204ENST00000558961 SF3B3Q15393 1217 aaKnown RBP14.44□□□□□ -0.1
BMP4-204ENST00000558961 ZBTB38Q8NAP3 1195 aaPredicted RBP14.44□□□□□ -0.1
BMP4-204ENST00000558961 FAM89AQ96GI7 184 aa14.44□□□□□ -0.1
BMP4-204ENST00000558961 MYH16Q9H6N6 1097 aa14.44□□□□□ -0.1
BMP4-204ENST00000558961 SALL2Q9Y467 1007 aaPredicted RBP14.44□□□□□ -0.1
BMP4-204ENST00000558961 ATP6V0A2Q9Y487 856 aa14.44□□□□□ -0.1
BMP4-204ENST00000558961 IARSP41252 1262 aaKnown RBP14.43□□□□□ -0.1
BMP4-204ENST00000558961 EXOSC9Q06265 439 aaKnown RBP14.43□□□□□ -0.1
BMP4-204ENST00000558961 DPY19L2Q6NUT2 758 aa14.43□□□□□ -0.1
BMP4-204ENST00000558961 KSR2Q6VAB6 950 aa14.43□□□□□ -0.1
BMP4-204ENST00000558961 SLC51AQ86UW1 340 aa14.43□□□□□ -0.1
BMP4-204ENST00000558961 RBM46Q8TBY0 533 aaKnown RBP14.43□□□□□ -0.1
BMP4-204ENST00000558961 MYD88Q99836 296 aa14.43□□□□□ -0.1
BMP4-204ENST00000558961 MAP3K2Q9Y2U5 619 aa14.43□□□□□ -0.1
BMP4-204ENST00000558961 PI4KAP2A4QPH2 592 aa14.42□□□□□ -0.1
BMP4-204ENST00000558961 POTECB2RU33 542 aa14.42□□□□□ -0.1
BMP4-204ENST00000558961 BBOX1O75936 387 aa14.42□□□□□ -0.1
BMP4-204ENST00000558961 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
BMP4-204ENST00000558961 PCCAP05165 728 aaPredicted RBP14.42□□□□□ -0.1
BMP4-204ENST00000558961 GRAPQ13588 217 aa14.42□□□□□ -0.1
BMP4-204ENST00000558961 G2E3Q7L622 706 aa14.42□□□□□ -0.1
BMP4-204ENST00000558961 TMC4Q7Z404 712 aa14.42□□□□□ -0.1
BMP4-204ENST00000558961 PI4KAP1Q8N8J0 262 aa14.42□□□□□ -0.1
BMP4-204ENST00000558961 GRAPLQ8TC17 118 aaPredicted RBP14.42□□□□□ -0.1
BMP4-204ENST00000558961 RRAGCQ9HB90 399 aa14.42□□□□□ -0.1
BMP4-204ENST00000558961 ZNF277Q9NRM2 450 aaPredicted RBP14.42□□□□□ -0.1
BMP4-204ENST00000558961 ADAMTSL1Q8N6G6 1762 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms