RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 TCIRG1Q13488 830 aa27.8■■■□□ 2.04
CRNDE-205ENST00000558952 CRY2Q49AN0 593 aa27.8■■■□□ 2.04
CRNDE-205ENST00000558952 CHMP4AQ9BY43 222 aa27.8■■■□□ 2.04
CRNDE-205ENST00000558952 RNF123Q5XPI4 1314 aa27.79■■■□□ 2.04
CRNDE-205ENST00000558952 ANKRD13DQ6ZTN6 518 aa27.79■■■□□ 2.04
CRNDE-205ENST00000558952 WWC1Q8IX03 1113 aa27.79■■■□□ 2.04
CRNDE-205ENST00000558952 PLBD2Q8NHP8 589 aa27.79■■■□□ 2.04
CRNDE-205ENST00000558952 FER1L6Q2WGJ9 1857 aa27.78■■■□□ 2.04
CRNDE-205ENST00000558952 ANKRD36CQ5JPF3 1778 aa27.78■■■□□ 2.04
CRNDE-205ENST00000558952 NCBP3Q53F19 620 aaKnown RBP27.77■■■□□ 2.04
CRNDE-205ENST00000558952 NLRP10Q86W26 655 aa27.77■■■□□ 2.04
CRNDE-205ENST00000558952 C16orf71Q8IYS4 520 aaPredicted RBP27.77■■■□□ 2.04
CRNDE-205ENST00000558952 C7orf43Q8WVR3 580 aa27.77■■■□□ 2.04
CRNDE-205ENST00000558952 RBM17Q96I25 401 aaKnown RBP27.77■■■□□ 2.04
CRNDE-205ENST00000558952 NLRP3Q96P20 1036 aa27.77■■■□□ 2.04
CRNDE-205ENST00000558952 TIAM2Q8IVF5 1701 aa27.77■■■□□ 2.04
CRNDE-205ENST00000558952 C8orf58Q8NAV2 365 aa27.76■■■□□ 2.03
CRNDE-205ENST00000558952 RTKN2Q8IZC4 609 aa27.75■■■□□ 2.03
CRNDE-205ENST00000558952 TRMT112Q9UI30 125 aaKnown RBP27.75■■■□□ 2.03
CRNDE-205ENST00000558952 GLTPD2A6NH11 291 aa27.74■■■□□ 2.03
CRNDE-205ENST00000558952 TOMM70O94826 608 aa27.74■■■□□ 2.03
CRNDE-205ENST00000558952 HOXA10P31260 410 aaPredicted RBP27.74■■■□□ 2.03
CRNDE-205ENST00000558952 GOLGA2Q08379 1002 aa27.74■■■□□ 2.03
CRNDE-205ENST00000558952 DPY19L2Q6NUT2 758 aa27.74■■■□□ 2.03
CRNDE-205ENST00000558952 IL16Q14005 1332 aa27.73■■■□□ 2.03
CRNDE-205ENST00000558952 CCDC88AQ3V6T2 1871 aa27.73■■■□□ 2.03
CRNDE-205ENST00000558952 FKBP4Q02790 459 aaKnown RBP eCLIP27.73■■■□□ 2.03
CRNDE-205ENST00000558952 SLC10A5Q5PT55 438 aa27.73■■■□□ 2.03
CRNDE-205ENST00000558952 CCDC30Q5VVM6 783 aa27.73■■■□□ 2.03
CRNDE-205ENST00000558952 TSR2Q969E8 191 aaKnown RBP27.73■■■□□ 2.03
CRNDE-205ENST00000558952 RRAGCQ9HB90 399 aa27.73■■■□□ 2.03
CRNDE-205ENST00000558952 SH3TC1Q8TE82 1336 aa27.72■■■□□ 2.03
CRNDE-205ENST00000558952 FAM9BQ8IZU0 186 aa27.72■■■□□ 2.03
CRNDE-205ENST00000558952 CRAMP1Q96RY5 1269 aa27.72■■■□□ 2.03
CRNDE-205ENST00000558952 CC2D2BQ6DHV5 1058 aa27.71■■■□□ 2.03
CRNDE-205ENST00000558952 RIC3Q7Z5B4 369 aa27.71■■■□□ 2.03
CRNDE-205ENST00000558952 SALL2Q9Y467 1007 aaPredicted RBP27.71■■■□□ 2.03
CRNDE-205ENST00000558952 OLFM4Q6UX06 510 aa27.7■■■□□ 2.02
CRNDE-205ENST00000558952 C3orf67Q6ZVT6 689 aa27.7■■■□□ 2.02
CRNDE-205ENST00000558952 PHAXQ9H814 394 aaKnown RBP27.7■■■□□ 2.02
CRNDE-205ENST00000558952 TMX4Q9H1E5 349 aaPredicted RBP27.69■■■□□ 2.02
CRNDE-205ENST00000558952 ATP5J2-PTCD1G3V325 749 aa27.68■■■□□ 2.02
CRNDE-205ENST00000558952 PPEF1O14829 653 aaPredicted RBP27.68■■■□□ 2.02
CRNDE-205ENST00000558952 HCLS1P14317 486 aaPredicted RBP27.68■■■□□ 2.02
CRNDE-205ENST00000558952 TSPYL6Q8N831 410 aa27.68■■■□□ 2.02
CRNDE-205ENST00000558952 ISCA1Q9BUE6 129 aa27.68■■■□□ 2.02
CRNDE-205ENST00000558952 DICER1Q9UPY3 1922 aaKnown RBP27.67■■■□□ 2.02
CRNDE-205ENST00000558952 DDX58O95786 925 aaKnown RBP27.67■■■□□ 2.02
CRNDE-205ENST00000558952 HSPA6P17066 643 aa27.67■■■□□ 2.02
CRNDE-205ENST00000558952 GRIPAP1Q4V328 841 aa27.67■■■□□ 2.02
CRNDE-205ENST00000558952 RBM46Q8TBY0 533 aaKnown RBP27.67■■■□□ 2.02
CRNDE-205ENST00000558952 STK31Q9BXU1 1019 aa27.67■■■□□ 2.02
CRNDE-205ENST00000558952 ZNF277Q9NRM2 450 aaPredicted RBP27.67■■■□□ 2.02
CRNDE-205ENST00000558952 VEGFAP15692 232 aaPredicted RBP27.66■■■□□ 2.02
CRNDE-205ENST00000558952 TWISTNBQ3B726 338 aaPredicted RBP27.66■■■□□ 2.02
CRNDE-205ENST00000558952 WDR63Q8IWG1 891 aa27.66■■■□□ 2.02
CRNDE-205ENST00000558952 TCERG1O14776 1098 aaKnown RBP27.65■■■□□ 2.02
CRNDE-205ENST00000558952 SYNE4Q8N205 404 aa27.65■■■□□ 2.02
CRNDE-205ENST00000558952 ZNF428Q96B54 188 aa27.65■■■□□ 2.02
CRNDE-205ENST00000558952 PSMD1Q99460 953 aa27.65■■■□□ 2.02
CRNDE-205ENST00000558952 DDX46Q7L014 1031 aaKnown RBP27.64■■■□□ 2.02
CRNDE-205ENST00000558952 IARSP41252 1262 aaKnown RBP27.63■■■□□ 2.01
CRNDE-205ENST00000558952 TRIM28Q13263 835 aaKnown RBP27.63■■■□□ 2.01
CRNDE-205ENST00000558952 FAM89AQ96GI7 184 aa27.63■■■□□ 2.01
CRNDE-205ENST00000558952 ABCC4O15439 1325 aa27.63■■■□□ 2.01
CRNDE-205ENST00000558952 MYD88Q99836 296 aa27.62■■■□□ 2.01
CRNDE-205ENST00000558952 FANCIQ9NVI1 1328 aa27.62■■■□□ 2.01
CRNDE-205ENST00000558952 SNED1Q8TER0 1413 aa27.6■■■□□ 2.01
CRNDE-205ENST00000558952 BBOX1O75936 387 aa27.6■■■□□ 2.01
CRNDE-205ENST00000558952 FSTL1Q12841 308 aa27.6■■■□□ 2.01
CRNDE-205ENST00000558952 ATP6V0A2Q9Y487 856 aa27.6■■■□□ 2.01
CRNDE-205ENST00000558952 WDR90Q96KV7 1748 aa27.59■■■□□ 2.01
CRNDE-205ENST00000558952 LAMB2P55268 1798 aa27.59■■■□□ 2.01
CRNDE-205ENST00000558952 DDNO94850 711 aaPredicted RBP27.59■■■□□ 2.01
CRNDE-205ENST00000558952 RTL5Q5HYW3 569 aaPredicted RBP27.59■■■□□ 2.01
CRNDE-205ENST00000558952 JDP2Q8WYK2 163 aa27.59■■■□□ 2.01
CRNDE-205ENST00000558952 HSP90B1P14625 803 aaKnown RBP27.58■■■□□ 2.01
CRNDE-205ENST00000558952 GRAPQ13588 217 aa27.58■■■□□ 2.01
CRNDE-205ENST00000558952 CCDC191Q8NCU4 936 aa27.58■■■□□ 2.01
CRNDE-205ENST00000558952 SMC1BQ8NDV3 1235 aa27.58■■■□□ 2.01
CRNDE-205ENST00000558952 GRAPLQ8TC17 118 aaPredicted RBP27.58■■■□□ 2.01
CRNDE-205ENST00000558952 METTL22Q9BUU2 404 aaPredicted RBP27.58■■■□□ 2.01
CRNDE-205ENST00000558952 IRS4O14654 1257 aaPredicted RBP27.57■■■□□ 2
CRNDE-205ENST00000558952 ZBTB38Q8NAP3 1195 aaPredicted RBP27.57■■■□□ 2
CRNDE-205ENST00000558952 MAP3K2Q9Y2U5 619 aa27.57■■■□□ 2
CRNDE-205ENST00000558952 SLC4A2P04920 1241 aa27.56■■■□□ 2
CRNDE-205ENST00000558952 KSR2Q6VAB6 950 aa27.56■■■□□ 2
CRNDE-205ENST00000558952 MYH16Q9H6N6 1097 aa27.56■■■□□ 2
CRNDE-205ENST00000558952 CWC25Q9NXE8 425 aaPredicted RBP27.56■■■□□ 2
CRNDE-205ENST00000558952 DDX60Q8IY21 1712 aaKnown RBP27.55■■■□□ 2
CRNDE-205ENST00000558952 APLP1P51693 650 aa27.55■■■□□ 2
CRNDE-205ENST00000558952 NEXNQ0ZGT2 675 aa27.55■■■□□ 2
CRNDE-205ENST00000558952 TMC4Q7Z404 712 aa27.55■■■□□ 2
CRNDE-205ENST00000558952 SP8Q8IXZ3 490 aa27.55■■■□□ 2
CRNDE-205ENST00000558952 PI4KAP2A4QPH2 592 aa27.54■■■□□ 2
CRNDE-205ENST00000558952 POTECB2RU33 542 aa27.54■■■□□ 2
CRNDE-205ENST00000558952 SF3B3Q15393 1217 aaKnown RBP27.54■■■□□ 2
CRNDE-205ENST00000558952 LARGE2Q8N3Y3 721 aa27.54■■■□□ 2
CRNDE-205ENST00000558952 PI4KAP1Q8N8J0 262 aa27.54■■■□□ 2
CRNDE-205ENST00000558952 SUPT20HQ8NEM7 779 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms