RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 FAM208AQ9UK61 1670 aaKnown RBP10.65□□□□□ -0.7
EXD1-204ENST00000558881 BMP2KLQ5H9B9 411 aa10.64□□□□□ -0.71
EXD1-204ENST00000558881 KIF3AQ9Y496 699 aa10.64□□□□□ -0.71
EXD1-204ENST00000558881 CRYBG1Q9Y4K1 1723 aa10.64□□□□□ -0.71
EXD1-204ENST00000558881 KDM3BQ7LBC6 1761 aa10.64□□□□□ -0.71
EXD1-204ENST00000558881 PI4KAP2A4QPH2 592 aa10.64□□□□□ -0.71
EXD1-204ENST00000558881 ZNF790Q6PG37 636 aa10.64□□□□□ -0.71
EXD1-204ENST00000558881 TOM1L2Q6ZVM7 507 aa10.64□□□□□ -0.71
EXD1-204ENST00000558881 PI4KAP1Q8N8J0 262 aa10.64□□□□□ -0.71
EXD1-204ENST00000558881 PIBF1Q8WXW3 757 aa10.64□□□□□ -0.71
EXD1-204ENST00000558881 GNAI3P08754 354 aa10.63□□□□□ -0.71
EXD1-204ENST00000558881 TAF7LQ5H9L4 462 aa10.63□□□□□ -0.71
EXD1-204ENST00000558881 PLEKHM2Q8IWE5 1019 aa10.63□□□□□ -0.71
EXD1-204ENST00000558881 OTUD7AQ8TE49 926 aaPredicted RBP10.63□□□□□ -0.71
EXD1-204ENST00000558881 DBF4Q9UBU7 674 aaPredicted RBP10.63□□□□□ -0.71
EXD1-204ENST00000558881 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.63□□□□□ -0.71
EXD1-204ENST00000558881 WDR17Q8IZU2 1322 aa10.63□□□□□ -0.71
EXD1-204ENST00000558881 PNMA6EA0A0J9YXQ4 647 aa10.63□□□□□ -0.71
EXD1-204ENST00000558881 BEND3Q5T5X7 828 aa10.63□□□□□ -0.71
EXD1-204ENST00000558881 GPT2Q8TD30 523 aa10.63□□□□□ -0.71
EXD1-204ENST00000558881 STRN4Q9NRL3 753 aa10.63□□□□□ -0.71
EXD1-204ENST00000558881 LRRFIP2Q9Y608 721 aaKnown RBP10.63□□□□□ -0.71
EXD1-204ENST00000558881 ATP8B2P98198 1209 aa10.62□□□□□ -0.71
EXD1-204ENST00000558881 LARP1Q6PKG0 1096 aaKnown RBP10.62□□□□□ -0.71
EXD1-204ENST00000558881 DNAAF4Q8WXU2 420 aa10.62□□□□□ -0.71
EXD1-204ENST00000558881 DCAF5Q96JK2 942 aa10.62□□□□□ -0.71
EXD1-204ENST00000558881 LARP6Q9BRS8 491 aaKnown RBP10.62□□□□□ -0.71
EXD1-204ENST00000558881 SRCIN1Q9C0H9 1055 aa10.62□□□□□ -0.71
EXD1-204ENST00000558881 ADCY9O60503 1353 aa10.62□□□□□ -0.71
EXD1-204ENST00000558881 TESPA1A2RU30 521 aaPredicted RBP10.61□□□□□ -0.71
EXD1-204ENST00000558881 DNTTIP2Q5QJE6 756 aaKnown RBP10.61□□□□□ -0.71
EXD1-204ENST00000558881 CHMP4AQ9BY43 222 aa10.61□□□□□ -0.71
EXD1-204ENST00000558881 ABCC6O95255 1503 aa10.61□□□□□ -0.71
EXD1-204ENST00000558881 HMMRO75330 724 aa10.61□□□□□ -0.71
EXD1-204ENST00000558881 GSPT1P15170 499 aaKnown RBP10.61□□□□□ -0.71
EXD1-204ENST00000558881 PDIA6Q15084 440 aa10.61□□□□□ -0.71
EXD1-204ENST00000558881 PDCL2Q8N4E4 241 aa10.61□□□□□ -0.71
EXD1-204ENST00000558881 JARID2Q92833 1246 aaPredicted RBP10.61□□□□□ -0.71
EXD1-204ENST00000558881 ZNF496Q96IT1 587 aaPredicted RBP10.61□□□□□ -0.71
EXD1-204ENST00000558881 FEZ1Q99689 392 aa10.61□□□□□ -0.71
EXD1-204ENST00000558881 EXOC6BQ9Y2D4 811 aa10.61□□□□□ -0.71
EXD1-204ENST00000558881 ADAMTS7Q9UKP4 1686 aa10.61□□□□□ -0.71
EXD1-204ENST00000558881 NBPF7P0C2Y1 421 aaPredicted RBP10.6□□□□□ -0.71
EXD1-204ENST00000558881 UBTFL1P0CB47 393 aaPredicted RBP10.6□□□□□ -0.71
EXD1-204ENST00000558881 EVA1CP58658 441 aa10.6□□□□□ -0.71
EXD1-204ENST00000558881 NOLC1Q14978 699 aaKnown RBP eCLIP10.6□□□□□ -0.71
EXD1-204ENST00000558881 ZCRB1Q8TBF4 217 aaKnown RBP10.6□□□□□ -0.71
EXD1-204ENST00000558881 TSC1Q92574 1164 aa10.6□□□□□ -0.71
EXD1-204ENST00000558881 BCL2L12Q9HB09 334 aa10.6□□□□□ -0.71
EXD1-204ENST00000558881 SPTLC3Q9NUV7 552 aa10.6□□□□□ -0.71
EXD1-204ENST00000558881 TMEM63CQ9P1W3 806 aa10.6□□□□□ -0.71
EXD1-204ENST00000558881 COL5A2P05997 1499 aaPredicted RBP10.6□□□□□ -0.71
EXD1-204ENST00000558881 PTMAP06454 111 aaKnown RBP10.6□□□□□ -0.71
EXD1-204ENST00000558881 CABP4P57796 275 aa10.6□□□□□ -0.71
EXD1-204ENST00000558881 AIMP1Q12904 312 aaKnown RBP10.6□□□□□ -0.71
EXD1-204ENST00000558881 ANKRD7Q92527 254 aa10.6□□□□□ -0.71
EXD1-204ENST00000558881 CWC22Q9HCG8 908 aaKnown RBP10.6□□□□□ -0.71
EXD1-204ENST00000558881 MAP3K2Q9Y2U5 619 aa10.6□□□□□ -0.71
EXD1-204ENST00000558881 USP16Q9Y5T5 823 aa10.6□□□□□ -0.71
EXD1-204ENST00000558881 PXDNLA1KZ92 1463 aa10.59□□□□□ -0.71
EXD1-204ENST00000558881 SYCE3A1L190 88 aa10.59□□□□□ -0.71
EXD1-204ENST00000558881 CARD10Q9BWT7 1032 aa10.59□□□□□ -0.71
EXD1-204ENST00000558881 DDX21Q9NR30 783 aaKnown RBP eCLIP10.59□□□□□ -0.71
EXD1-204ENST00000558881 RBM27Q9P2N5 1060 aaKnown RBP10.59□□□□□ -0.71
EXD1-204ENST00000558881 PRPF40AO75400 957 aaKnown RBP10.59□□□□□ -0.71
EXD1-204ENST00000558881 MBD3O95983 291 aa10.59□□□□□ -0.71
EXD1-204ENST00000558881 PIP4K2AP48426 406 aaPredicted RBP10.59□□□□□ -0.71
EXD1-204ENST00000558881 SLC20A2Q08357 652 aa10.59□□□□□ -0.71
EXD1-204ENST00000558881 RABEP1Q15276 862 aa10.59□□□□□ -0.71
EXD1-204ENST00000558881 KSR2Q6VAB6 950 aa10.59□□□□□ -0.71
EXD1-204ENST00000558881 DDX54Q8TDD1 881 aaKnown RBP10.59□□□□□ -0.71
EXD1-204ENST00000558881 SLC24A3Q9HC58 644 aa10.59□□□□□ -0.71
EXD1-204ENST00000558881 HYPKQ9NX55 129 aa10.59□□□□□ -0.71
EXD1-204ENST00000558881 SIPA1L3O60292 1781 aaPredicted RBP10.58□□□□□ -0.72
EXD1-204ENST00000558881 MYL6BP14649 208 aa10.58□□□□□ -0.72
EXD1-204ENST00000558881 IL2RBP14784 551 aa10.58□□□□□ -0.72
EXD1-204ENST00000558881 GABPB1Q06547 395 aaPredicted RBP10.58□□□□□ -0.72
EXD1-204ENST00000558881 TTC22Q5TAA0 569 aa10.58□□□□□ -0.72
EXD1-204ENST00000558881 TBC1D9Q6ZT07 1266 aa10.58□□□□□ -0.72
EXD1-204ENST00000558881 MS4A4AQ96JQ5 239 aa10.58□□□□□ -0.72
EXD1-204ENST00000558881 CGNQ9P2M7 1197 aaKnown RBP10.58□□□□□ -0.72
EXD1-204ENST00000558881 CWF19L2Q2TBE0 894 aaKnown RBP10.58□□□□□ -0.72
EXD1-204ENST00000558881 PPP1R42Q7Z4L9 355 aa10.58□□□□□ -0.72
EXD1-204ENST00000558881 TTC5Q8N0Z6 440 aa10.58□□□□□ -0.72
EXD1-204ENST00000558881 ZNF830Q96NB3 372 aaPredicted RBP10.58□□□□□ -0.72
EXD1-204ENST00000558881 PLEKHG2Q9H7P9 1386 aa10.57□□□□□ -0.72
EXD1-204ENST00000558881 SSH3Q8TE77 659 aa10.57□□□□□ -0.72
EXD1-204ENST00000558881 PCDH11XQ9BZA7 1347 aa10.56□□□□□ -0.72
EXD1-204ENST00000558881 PCDH11YQ9BZA8 1340 aa10.56□□□□□ -0.72
EXD1-204ENST00000558881 CTIFO43310 598 aaKnown RBP10.56□□□□□ -0.72
EXD1-204ENST00000558881 SNRPA1P09661 255 aaKnown RBP10.56□□□□□ -0.72
EXD1-204ENST00000558881 FMNL2Q96PY5 1086 aa10.56□□□□□ -0.72
EXD1-204ENST00000558881 BTG4Q9NY30 223 aa10.56□□□□□ -0.72
EXD1-204ENST00000558881 OGFRQ9NZT2 677 aa10.56□□□□□ -0.72
EXD1-204ENST00000558881 SCN11AQ9UI33 1791 aa10.56□□□□□ -0.72
EXD1-204ENST00000558881 CDK11BP21127 795 aaKnown RBP10.56□□□□□ -0.72
EXD1-204ENST00000558881 PKP1Q13835 747 aa10.56□□□□□ -0.72
EXD1-204ENST00000558881 UVSSAQ2YD98 709 aa10.56□□□□□ -0.72
EXD1-204ENST00000558881 COPS6Q7L5N1 327 aa10.56□□□□□ -0.72
EXD1-204ENST00000558881 FAM184AQ8NB25 1140 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms