RNA–Protein interactions for RNA: ENST00000558859.5

CPNE6-209, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-209ENST00000558859 LMOD1P29536 600 aaPredicted RBP19.4■□□□□ 0.7
CPNE6-209ENST00000558859 NBPF10Q6P3W6 841 aaKnown RBP19.4■□□□□ 0.7
CPNE6-209ENST00000558859 NBPF15Q8N660 670 aa19.4■□□□□ 0.7
CPNE6-209ENST00000558859 BTBD11A6QL63 1104 aa19.39■□□□□ 0.69
CPNE6-209ENST00000558859 HOXA10P31260 410 aaPredicted RBP19.39■□□□□ 0.69
CPNE6-209ENST00000558859 BRPF1P55201 1214 aaPredicted RBP19.39■□□□□ 0.69
CPNE6-209ENST00000558859 GRIPAP1Q4V328 841 aa19.39■□□□□ 0.69
CPNE6-209ENST00000558859 GJA3Q9Y6H8 435 aa19.39■□□□□ 0.69
CPNE6-209ENST00000558859 NUP98P52948 1817 aa19.38■□□□□ 0.69
CPNE6-209ENST00000558859 PAXIP1Q6ZW49 1069 aaPredicted RBP19.38■□□□□ 0.69
CPNE6-209ENST00000558859 PGAP2Q9UHJ9 254 aa19.38■□□□□ 0.69
CPNE6-209ENST00000558859 RIC1Q4ADV7 1423 aa19.37■□□□□ 0.69
CPNE6-209ENST00000558859 ABCC12Q96J65 1359 aa19.37■□□□□ 0.69
CPNE6-209ENST00000558859 PER1O15534 1290 aaPredicted RBP19.37■□□□□ 0.69
CPNE6-209ENST00000558859 SNRPA1P09661 255 aaKnown RBP19.37■□□□□ 0.69
CPNE6-209ENST00000558859 HLFQ16534 295 aa19.37■□□□□ 0.69
CPNE6-209ENST00000558859 GRM1Q13255 1194 aa19.36■□□□□ 0.69
CPNE6-209ENST00000558859 KIF7Q2M1P5 1343 aa19.35■□□□□ 0.69
CPNE6-209ENST00000558859 GPRC5DQ9NZD1 345 aa19.35■□□□□ 0.69
CPNE6-209ENST00000558859 LARGE2Q8N3Y3 721 aa19.34■□□□□ 0.69
CPNE6-209ENST00000558859 PHACTR3Q96KR7 559 aa19.34■□□□□ 0.69
CPNE6-209ENST00000558859 ADARB2Q9NS39 739 aaKnown RBP19.34■□□□□ 0.69
CPNE6-209ENST00000558859 FAM177BA6PVY3 158 aa19.33■□□□□ 0.68
CPNE6-209ENST00000558859 VPS33BQ9H267 617 aa19.33■□□□□ 0.68
CPNE6-209ENST00000558859 CLSPNQ9HAW4 1339 aa19.32■□□□□ 0.68
CPNE6-209ENST00000558859 CELF2O95319 508 aaKnown RBP19.32■□□□□ 0.68
CPNE6-209ENST00000558859 DGKZQ13574 1117 aa19.32■□□□□ 0.68
CPNE6-209ENST00000558859 SLC51AQ86UW1 340 aa19.32■□□□□ 0.68
CPNE6-209ENST00000558859 CRAMP1Q96RY5 1269 aa19.32■□□□□ 0.68
CPNE6-209ENST00000558859 NYXQ9GZU5 481 aa19.32■□□□□ 0.68
CPNE6-209ENST00000558859 IBTKQ9P2D0 1353 aaPredicted RBP19.32■□□□□ 0.68
CPNE6-209ENST00000558859 ERVV-1B6SEH8 477 aa19.3■□□□□ 0.68
CPNE6-209ENST00000558859 GTF2E1P29083 439 aaPredicted RBP19.3■□□□□ 0.68
CPNE6-209ENST00000558859 CIAPIN1Q6FI81 312 aa19.3■□□□□ 0.68
CPNE6-209ENST00000558859 NUTM1Q86Y26 1132 aa19.3■□□□□ 0.68
CPNE6-209ENST00000558859 NIM1KQ8IY84 436 aa19.3■□□□□ 0.68
CPNE6-209ENST00000558859 ZC3H15Q8WU90 426 aaKnown RBP19.3■□□□□ 0.68
CPNE6-209ENST00000558859 GLIS2Q9BZE0 524 aaPredicted RBP19.3■□□□□ 0.68
CPNE6-209ENST00000558859 NPC1L1Q9UHC9 1359 aa19.3■□□□□ 0.68
CPNE6-209ENST00000558859 LAMB4A4D0S4 1761 aa19.29■□□□□ 0.68
CPNE6-209ENST00000558859 U2SURPO15042 1029 aaKnown RBP19.29■□□□□ 0.68
CPNE6-209ENST00000558859 CXCL9Q07325 125 aa19.29■□□□□ 0.68
CPNE6-209ENST00000558859 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
CPNE6-209ENST00000558859 ZIC5Q96T25 663 aa19.29■□□□□ 0.68
CPNE6-209ENST00000558859 RSPH6AQ9H0K4 717 aa19.29■□□□□ 0.68
CPNE6-209ENST00000558859 POLR2AP24928 1970 aaKnown RBP19.29■□□□□ 0.68
CPNE6-209ENST00000558859 HIRAP54198 1017 aaPredicted RBP19.28■□□□□ 0.68
CPNE6-209ENST00000558859 NOGQ13253 232 aa19.28■□□□□ 0.68
CPNE6-209ENST00000558859 RPGRQ92834 1020 aaKnown RBP19.28■□□□□ 0.68
CPNE6-209ENST00000558859 RTFDC1Q9BY42 306 aaPredicted RBP19.28■□□□□ 0.68
CPNE6-209ENST00000558859 CDHR2Q9BYE9 1310 aa19.27■□□□□ 0.68
CPNE6-209ENST00000558859 ZNRF3Q9ULT6 936 aa19.27■□□□□ 0.68
CPNE6-209ENST00000558859 UBN2Q6ZU65 1347 aa19.26■□□□□ 0.67
CPNE6-209ENST00000558859 PPEF1O14829 653 aaPredicted RBP19.26■□□□□ 0.67
CPNE6-209ENST00000558859 PPIP5K2O43314 1243 aa19.26■□□□□ 0.67
CPNE6-209ENST00000558859 PRKAR2BP31323 418 aa19.26■□□□□ 0.67
CPNE6-209ENST00000558859 CC2D1BQ5T0F9 858 aaKnown RBP19.26■□□□□ 0.67
CPNE6-209ENST00000558859 RBM17Q96I25 401 aaKnown RBP19.26■□□□□ 0.67
CPNE6-209ENST00000558859 MAP3K15Q6ZN16 1313 aa19.25■□□□□ 0.67
CPNE6-209ENST00000558859 GMPSP49915 693 aaPredicted RBP19.25■□□□□ 0.67
CPNE6-209ENST00000558859 AOC3Q16853 763 aa19.25■□□□□ 0.67
CPNE6-209ENST00000558859 C3orf67Q6ZVT6 689 aa19.25■□□□□ 0.67
CPNE6-209ENST00000558859 CDC37L1Q7L3B6 337 aa19.25■□□□□ 0.67
CPNE6-209ENST00000558859 ATP6V0A2Q9Y487 856 aa19.25■□□□□ 0.67
CPNE6-209ENST00000558859 AKAP11Q9UKA4 1901 aa19.25■□□□□ 0.67
CPNE6-209ENST00000558859 FAM155AB1AL88 458 aaPredicted RBP19.24■□□□□ 0.67
CPNE6-209ENST00000558859 MCM10Q7L590 875 aa19.24■□□□□ 0.67
CPNE6-209ENST00000558859 ZNF34Q8IZ26 560 aa19.24■□□□□ 0.67
CPNE6-209ENST00000558859 SAGE1Q9NXZ1 904 aa19.24■□□□□ 0.67
CPNE6-209ENST00000558859 SUSD4Q5VX71 490 aa19.23■□□□□ 0.67
CPNE6-209ENST00000558859 HTATSF1O43719 755 aaKnown RBP19.22■□□□□ 0.67
CPNE6-209ENST00000558859 NTSR2O95665 410 aa19.22■□□□□ 0.67
CPNE6-209ENST00000558859 PRPF38BQ5VTL8 546 aaKnown RBP19.22■□□□□ 0.67
CPNE6-209ENST00000558859 TRPM4Q8TD43 1214 aa19.22■□□□□ 0.67
CPNE6-209ENST00000558859 SLC10A5Q5PT55 438 aa19.21■□□□□ 0.67
CPNE6-209ENST00000558859 TTLL7Q6ZT98 887 aa19.21■□□□□ 0.67
CPNE6-209ENST00000558859 SUPT20HQ8NEM7 779 aa19.21■□□□□ 0.67
CPNE6-209ENST00000558859 ANKRD36CQ5JPF3 1778 aa19.2■□□□□ 0.66
CPNE6-209ENST00000558859 KDM3BQ7LBC6 1761 aa19.2■□□□□ 0.66
CPNE6-209ENST00000558859 HUNKP57058 714 aa19.2■□□□□ 0.66
CPNE6-209ENST00000558859 KIAA2012Q0VF49 1180 aa19.2■□□□□ 0.66
CPNE6-209ENST00000558859 TAF7Q15545 349 aaPredicted RBP19.2■□□□□ 0.66
CPNE6-209ENST00000558859 RTF1Q92541 710 aaKnown RBP19.2■□□□□ 0.66
CPNE6-209ENST00000558859 ZNF408Q9H9D4 720 aa19.2■□□□□ 0.66
CPNE6-209ENST00000558859 TCERG1O14776 1098 aaKnown RBP19.19■□□□□ 0.66
CPNE6-209ENST00000558859 GPTP24298 496 aa19.19■□□□□ 0.66
CPNE6-209ENST00000558859 SOX10P56693 466 aa19.19■□□□□ 0.66
CPNE6-209ENST00000558859 DCTN1Q14203 1278 aa19.19■□□□□ 0.66
CPNE6-209ENST00000558859 RGMBQ6NW40 437 aa19.19■□□□□ 0.66
CPNE6-209ENST00000558859 LAMB2P55268 1798 aa19.19■□□□□ 0.66
CPNE6-209ENST00000558859 SHTN1A0MZ66 631 aa19.18■□□□□ 0.66
CPNE6-209ENST00000558859 TNIP1Q15025 636 aa19.18■□□□□ 0.66
CPNE6-209ENST00000558859 GIGYF2Q6Y7W6 1299 aaKnown RBP19.18■□□□□ 0.66
CPNE6-209ENST00000558859 CNOT7Q9UIV1 285 aaKnown RBP19.18■□□□□ 0.66
CPNE6-209ENST00000558859 ABCC4O15439 1325 aa19.18■□□□□ 0.66
CPNE6-209ENST00000558859 YDJCA8MPS7 323 aa19.17■□□□□ 0.66
CPNE6-209ENST00000558859 USP48Q86UV5 1035 aa19.17■□□□□ 0.66
CPNE6-209ENST00000558859 SP8Q8IXZ3 490 aa19.17■□□□□ 0.66
CPNE6-209ENST00000558859 NGEFQ8N5V2 710 aa19.17■□□□□ 0.66
CPNE6-209ENST00000558859 NLRP3Q96P20 1036 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms