RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 KCNQ3O43525 872 aa16.25■□□□□ 0.19
SMAD3-206ENST00000558739 ZNF790Q6PG37 636 aa16.25■□□□□ 0.19
SMAD3-206ENST00000558739 LARGE2Q8N3Y3 721 aa16.25■□□□□ 0.19
SMAD3-206ENST00000558739 AKAP11Q9UKA4 1901 aa16.24■□□□□ 0.19
SMAD3-206ENST00000558739 SHTN1A0MZ66 631 aa16.24■□□□□ 0.19
SMAD3-206ENST00000558739 FAM155AB1AL88 458 aaPredicted RBP16.24■□□□□ 0.19
SMAD3-206ENST00000558739 NOGQ13253 232 aa16.24■□□□□ 0.19
SMAD3-206ENST00000558739 TRPM4Q8TD43 1214 aa16.24■□□□□ 0.19
SMAD3-206ENST00000558739 ADARB2Q9NS39 739 aaKnown RBP16.24■□□□□ 0.19
SMAD3-206ENST00000558739 HIRAP54198 1017 aaPredicted RBP16.23■□□□□ 0.19
SMAD3-206ENST00000558739 HUNKP57058 714 aa16.23■□□□□ 0.19
SMAD3-206ENST00000558739 NIP7Q9Y221 180 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMAD3-206ENST00000558739 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
SMAD3-206ENST00000558739 TRPA1O75762 1119 aa16.22■□□□□ 0.19
SMAD3-206ENST00000558739 GMPSP49915 693 aaPredicted RBP16.22■□□□□ 0.19
SMAD3-206ENST00000558739 HPS5Q9UPZ3 1129 aa16.22■□□□□ 0.19
SMAD3-206ENST00000558739 COL6A3P12111 3177 aa16.22■□□□□ 0.19
SMAD3-206ENST00000558739 AOC3Q16853 763 aa16.21■□□□□ 0.19
SMAD3-206ENST00000558739 CRY2Q49AN0 593 aa16.21■□□□□ 0.19
SMAD3-206ENST00000558739 HABP4Q5JVS0 413 aaKnown RBP16.21■□□□□ 0.19
SMAD3-206ENST00000558739 IL17REQ8NFR9 667 aa16.21■□□□□ 0.19
SMAD3-206ENST00000558739 RNF186Q9NXI6 227 aa16.21■□□□□ 0.19
SMAD3-206ENST00000558739 NPC1L1Q9UHC9 1359 aa16.21■□□□□ 0.19
SMAD3-206ENST00000558739 POLR2AP24928 1970 aaKnown RBP16.2■□□□□ 0.18
SMAD3-206ENST00000558739 ALDH1B1P30837 517 aa16.2■□□□□ 0.18
SMAD3-206ENST00000558739 TPTE2Q6XPS3 522 aa16.2■□□□□ 0.18
SMAD3-206ENST00000558739 NPM2Q86SE8 214 aaKnown RBP16.2■□□□□ 0.18
SMAD3-206ENST00000558739 MORC1Q86VD1 984 aa16.2■□□□□ 0.18
SMAD3-206ENST00000558739 NUTM1Q86Y26 1132 aa16.2■□□□□ 0.18
SMAD3-206ENST00000558739 NIM1KQ8IY84 436 aa16.2■□□□□ 0.18
SMAD3-206ENST00000558739 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
SMAD3-206ENST00000558739 KIAA0100Q14667 2235 aaKnown RBP16.19■□□□□ 0.18
SMAD3-206ENST00000558739 KIF23Q02241 960 aaPredicted RBP16.19■□□□□ 0.18
SMAD3-206ENST00000558739 CXCL9Q07325 125 aa16.19■□□□□ 0.18
SMAD3-206ENST00000558739 HLFQ16534 295 aa16.19■□□□□ 0.18
SMAD3-206ENST00000558739 CLEC4GQ6UXB4 293 aa16.19■□□□□ 0.18
SMAD3-206ENST00000558739 CTU1Q7Z7A3 348 aaKnown RBP16.19■□□□□ 0.18
SMAD3-206ENST00000558739 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
SMAD3-206ENST00000558739 TEX13AQ9BXU3 409 aaPredicted RBP16.19■□□□□ 0.18
SMAD3-206ENST00000558739 PANK3Q9H999 370 aa16.19■□□□□ 0.18
SMAD3-206ENST00000558739 SAGE1Q9NXZ1 904 aa16.19■□□□□ 0.18
SMAD3-206ENST00000558739 PGAP2Q9UHJ9 254 aa16.19■□□□□ 0.18
SMAD3-206ENST00000558739 PPIP5K2O43314 1243 aa16.18■□□□□ 0.18
SMAD3-206ENST00000558739 NBPF26B4DH59 902 aa16.17■□□□□ 0.18
SMAD3-206ENST00000558739 TEFQ10587 303 aa16.17■□□□□ 0.18
SMAD3-206ENST00000558739 NBPF10Q6P3W6 841 aaKnown RBP16.17■□□□□ 0.18
SMAD3-206ENST00000558739 C3orf67Q6ZVT6 689 aa16.17■□□□□ 0.18
SMAD3-206ENST00000558739 USP48Q86UV5 1035 aa16.17■□□□□ 0.18
SMAD3-206ENST00000558739 NBPF15Q8N660 670 aa16.17■□□□□ 0.18
SMAD3-206ENST00000558739 ZNF652Q9Y2D9 606 aa16.17■□□□□ 0.18
SMAD3-206ENST00000558739 RIC1Q4ADV7 1423 aa16.17■□□□□ 0.18
SMAD3-206ENST00000558739 RGMBQ6NW40 437 aa16.16■□□□□ 0.18
SMAD3-206ENST00000558739 PPEF1O14829 653 aaPredicted RBP16.15■□□□□ 0.18
SMAD3-206ENST00000558739 CDC37L1Q7L3B6 337 aa16.15■□□□□ 0.18
SMAD3-206ENST00000558739 LAMA3Q16787 3333 aa16.15■□□□□ 0.18
SMAD3-206ENST00000558739 NUP98P52948 1817 aa16.15■□□□□ 0.18
SMAD3-206ENST00000558739 ADM5C9JUS6 153 aa16.14■□□□□ 0.17
SMAD3-206ENST00000558739 RAD17O75943 681 aa16.14■□□□□ 0.17
SMAD3-206ENST00000558739 EGFRP00533 1210 aa16.14■□□□□ 0.17
SMAD3-206ENST00000558739 GTF2E1P29083 439 aaPredicted RBP16.14■□□□□ 0.17
SMAD3-206ENST00000558739 FXR1P51114 621 aaKnown RBP eCLIP16.14■□□□□ 0.17
SMAD3-206ENST00000558739 CC2D2BQ6DHV5 1058 aa16.14■□□□□ 0.17
SMAD3-206ENST00000558739 RPGRQ92834 1020 aaKnown RBP16.13■□□□□ 0.17
SMAD3-206ENST00000558739 GCC1Q96CN9 775 aa16.13■□□□□ 0.17
SMAD3-206ENST00000558739 CSRNP1Q96S65 589 aa16.13■□□□□ 0.17
SMAD3-206ENST00000558739 ZNRF3Q9ULT6 936 aa16.13■□□□□ 0.17
SMAD3-206ENST00000558739 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
SMAD3-206ENST00000558739 HOXA10P31260 410 aaPredicted RBP16.12■□□□□ 0.17
SMAD3-206ENST00000558739 ZNF157P51786 506 aaPredicted RBP16.12■□□□□ 0.17
SMAD3-206ENST00000558739 ZC3H15Q8WU90 426 aaKnown RBP16.12■□□□□ 0.17
SMAD3-206ENST00000558739 GBA2Q9HCG7 927 aaPredicted RBP16.12■□□□□ 0.17
SMAD3-206ENST00000558739 GNAT3A8MTJ3 354 aa16.11■□□□□ 0.17
SMAD3-206ENST00000558739 SLC10A3P09131 477 aa16.11■□□□□ 0.17
SMAD3-206ENST00000558739 SAMD7Q7Z3H4 446 aa16.11■□□□□ 0.17
SMAD3-206ENST00000558739 MICALL2Q8IY33 904 aa16.11■□□□□ 0.17
SMAD3-206ENST00000558739 BCL2L13Q9BXK5 485 aa16.11■□□□□ 0.17
SMAD3-206ENST00000558739 UBN2Q6ZU65 1347 aa16.11■□□□□ 0.17
SMAD3-206ENST00000558739 DUOX1Q9NRD9 1551 aa16.1■□□□□ 0.17
SMAD3-206ENST00000558739 BTBD11A6QL63 1104 aa16.1■□□□□ 0.17
SMAD3-206ENST00000558739 YDJCA8MPS7 323 aa16.1■□□□□ 0.17
SMAD3-206ENST00000558739 KRT26Q7Z3Y9 468 aa16.1■□□□□ 0.17
SMAD3-206ENST00000558739 CNOT7Q9UIV1 285 aaKnown RBP16.1■□□□□ 0.17
SMAD3-206ENST00000558739 KIF7Q2M1P5 1343 aa16.1■□□□□ 0.17
SMAD3-206ENST00000558739 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
SMAD3-206ENST00000558739 GPTP24298 496 aa16.09■□□□□ 0.17
SMAD3-206ENST00000558739 ZNF296Q8WUU4 475 aaPredicted RBP16.09■□□□□ 0.17
SMAD3-206ENST00000558739 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
SMAD3-206ENST00000558739 CDHR2Q9BYE9 1310 aa16.09■□□□□ 0.17
SMAD3-206ENST00000558739 LAMB4A4D0S4 1761 aa16.08■□□□□ 0.17
SMAD3-206ENST00000558739 TAF1P21675 1872 aa16.08■□□□□ 0.17
SMAD3-206ENST00000558739 TBC1D10BQ4KMP7 808 aaPredicted RBP16.08■□□□□ 0.16
SMAD3-206ENST00000558739 RASAL3Q86YV0 1011 aa16.08■□□□□ 0.16
SMAD3-206ENST00000558739 CCDC102AQ96A19 550 aa16.08■□□□□ 0.16
SMAD3-206ENST00000558739 CRAMP1Q96RY5 1269 aa16.08■□□□□ 0.16
SMAD3-206ENST00000558739 LAMB2P55268 1798 aa16.08■□□□□ 0.16
SMAD3-206ENST00000558739 ASTN2O75129 1339 aaPredicted RBP16.07■□□□□ 0.16
SMAD3-206ENST00000558739 DIAPH1O60610 1272 aaKnown RBP16.06■□□□□ 0.16
SMAD3-206ENST00000558739 TBC1D8O95759 1140 aa16.06■□□□□ 0.16
SMAD3-206ENST00000558739 SNRPA1P09661 255 aaKnown RBP16.06■□□□□ 0.16
SMAD3-206ENST00000558739 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms