RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 JDP2Q8WYK2 163 aa9.19□□□□□ -0.94
LRRC28-207ENST00000558500 PANK3Q9H999 370 aa9.19□□□□□ -0.94
LRRC28-207ENST00000558500 GJA3Q9Y6H8 435 aa9.19□□□□□ -0.94
LRRC28-207ENST00000558500 SCN7AQ01118 1682 aa9.19□□□□□ -0.94
LRRC28-207ENST00000558500 SCN11AQ9UI33 1791 aa9.19□□□□□ -0.94
LRRC28-207ENST00000558500 EPS15P42566 896 aa9.18□□□□□ -0.94
LRRC28-207ENST00000558500 SCNN1DP51172 638 aa9.18□□□□□ -0.94
LRRC28-207ENST00000558500 EIF6P56537 245 aaKnown RBP9.18□□□□□ -0.94
LRRC28-207ENST00000558500 DGKZQ13574 1117 aa9.18□□□□□ -0.94
LRRC28-207ENST00000558500 CLEC4GQ6UXB4 293 aa9.18□□□□□ -0.94
LRRC28-207ENST00000558500 USP50Q70EL3 339 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-207ENST00000558500 PSMD1Q99460 953 aa9.18□□□□□ -0.94
LRRC28-207ENST00000558500 PDE4DIPQ5VU43 2346 aa9.17□□□□□ -0.94
LRRC28-207ENST00000558500 SNED1Q8TER0 1413 aa9.17□□□□□ -0.94
LRRC28-207ENST00000558500 ALDH1B1P30837 517 aa9.17□□□□□ -0.94
LRRC28-207ENST00000558500 BRPF1P55201 1214 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-207ENST00000558500 TEFQ10587 303 aa9.17□□□□□ -0.94
LRRC28-207ENST00000558500 TPTE2Q6XPS3 522 aa9.17□□□□□ -0.94
LRRC28-207ENST00000558500 SAPCD2Q86UD0 394 aa9.17□□□□□ -0.94
LRRC28-207ENST00000558500 HHIPL1Q96JK4 782 aa9.17□□□□□ -0.94
LRRC28-207ENST00000558500 FMNL2Q96PY5 1086 aa9.17□□□□□ -0.94
LRRC28-207ENST00000558500 LTBP1Q14766 1721 aa9.17□□□□□ -0.94
LRRC28-207ENST00000558500 PRKAR2AP13861 404 aaKnown RBP9.16□□□□□ -0.94
LRRC28-207ENST00000558500 IL17REQ8NFR9 667 aa9.16□□□□□ -0.94
LRRC28-207ENST00000558500 ZNF652Q9Y2D9 606 aa9.16□□□□□ -0.94
LRRC28-207ENST00000558500 CELF2O95319 508 aaKnown RBP9.15□□□□□ -0.94
LRRC28-207ENST00000558500 PRPF38BQ5VTL8 546 aaKnown RBP9.15□□□□□ -0.94
LRRC28-207ENST00000558500 CC2D2BQ6DHV5 1058 aa9.15□□□□□ -0.94
LRRC28-207ENST00000558500 CIAPIN1Q6FI81 312 aa9.15□□□□□ -0.94
LRRC28-207ENST00000558500 NIP7Q9Y221 180 aaKnown RBP eCLIP9.15□□□□□ -0.94
LRRC28-207ENST00000558500 UBR2Q8IWV8 1755 aa9.14□□□□□ -0.95
LRRC28-207ENST00000558500 ARFGEF2Q9Y6D5 1785 aa9.14□□□□□ -0.95
LRRC28-207ENST00000558500 COL4A5P29400 1685 aa9.14□□□□□ -0.95
LRRC28-207ENST00000558500 FAM177BA6PVY3 158 aa9.14□□□□□ -0.95
LRRC28-207ENST00000558500 RGL2O15211 777 aa9.14□□□□□ -0.95
LRRC28-207ENST00000558500 PIP4K2AP48426 406 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-207ENST00000558500 CRY2Q49AN0 593 aa9.14□□□□□ -0.95
LRRC28-207ENST00000558500 LARGE2Q8N3Y3 721 aa9.14□□□□□ -0.95
LRRC28-207ENST00000558500 ADARB2Q9NS39 739 aaKnown RBP9.14□□□□□ -0.95
LRRC28-207ENST00000558500 USP16Q9Y5T5 823 aa9.14□□□□□ -0.95
LRRC28-207ENST00000558500 TNRC18O15417 2968 aaPredicted RBP9.13□□□□□ -0.95
LRRC28-207ENST00000558500 GNAT3A8MTJ3 354 aa9.13□□□□□ -0.95
LRRC28-207ENST00000558500 KCNQ3O43525 872 aa9.13□□□□□ -0.95
LRRC28-207ENST00000558500 GTF2E1P29083 439 aaPredicted RBP9.13□□□□□ -0.95
LRRC28-207ENST00000558500 SOX10P56693 466 aa9.13□□□□□ -0.95
LRRC28-207ENST00000558500 NOGQ13253 232 aa9.13□□□□□ -0.95
LRRC28-207ENST00000558500 GRIPAP1Q4V328 841 aa9.13□□□□□ -0.95
LRRC28-207ENST00000558500 ZIC5Q96T25 663 aa9.13□□□□□ -0.95
LRRC28-207ENST00000558500 GLIS2Q9BZE0 524 aaPredicted RBP9.13□□□□□ -0.95
LRRC28-207ENST00000558500 GPRC5DQ9NZD1 345 aa9.13□□□□□ -0.95
LRRC28-207ENST00000558500 PGAP2Q9UHJ9 254 aa9.13□□□□□ -0.95
LRRC28-207ENST00000558500 KNSTRNQ9Y448 316 aa9.13□□□□□ -0.95
LRRC28-207ENST00000558500 PRAMEF22A3QJZ6 481 aa9.12□□□□□ -0.95
LRRC28-207ENST00000558500 BTBD11A6QL63 1104 aa9.12□□□□□ -0.95
LRRC28-207ENST00000558500 DIAPH1O60610 1272 aaKnown RBP9.12□□□□□ -0.95
LRRC28-207ENST00000558500 NIM1KQ8IY84 436 aa9.12□□□□□ -0.95
LRRC28-207ENST00000558500 GAS2L2Q8NHY3 880 aa9.12□□□□□ -0.95
LRRC28-207ENST00000558500 HOXA10P31260 410 aaPredicted RBP9.11□□□□□ -0.95
LRRC28-207ENST00000558500 HLFQ16534 295 aa9.11□□□□□ -0.95
LRRC28-207ENST00000558500 SLC51AQ86UW1 340 aa9.11□□□□□ -0.95
LRRC28-207ENST00000558500 ZNF408Q9H9D4 720 aa9.11□□□□□ -0.95
LRRC28-207ENST00000558500 CEMIPQ8WUJ3 1361 aa9.11□□□□□ -0.95
LRRC28-207ENST00000558500 ABCC12Q96J65 1359 aa9.11□□□□□ -0.95
LRRC28-207ENST00000558500 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
LRRC28-207ENST00000558500 PPIP5K2O43314 1243 aa9.1□□□□□ -0.95
LRRC28-207ENST00000558500 SNRPA1P09661 255 aaKnown RBP9.1□□□□□ -0.95
LRRC28-207ENST00000558500 GMPSP49915 693 aaPredicted RBP9.1□□□□□ -0.95
LRRC28-207ENST00000558500 HIRAP54198 1017 aaPredicted RBP9.1□□□□□ -0.95
LRRC28-207ENST00000558500 HUNKP57058 714 aa9.1□□□□□ -0.95
LRRC28-207ENST00000558500 CXCL9Q07325 125 aa9.1□□□□□ -0.95
LRRC28-207ENST00000558500 NBPF10Q6P3W6 841 aaKnown RBP9.1□□□□□ -0.95
LRRC28-207ENST00000558500 NBPF15Q8N660 670 aa9.1□□□□□ -0.95
LRRC28-207ENST00000558500 ZC3H15Q8WU90 426 aaKnown RBP9.1□□□□□ -0.95
LRRC28-207ENST00000558500 RPGRQ92834 1020 aaKnown RBP9.1□□□□□ -0.95
LRRC28-207ENST00000558500 SAGE1Q9NXZ1 904 aa9.1□□□□□ -0.95
LRRC28-207ENST00000558500 NPC1L1Q9UHC9 1359 aa9.1□□□□□ -0.95
LRRC28-207ENST00000558500 BCORQ6W2J9 1755 aa9.09□□□□□ -0.95
LRRC28-207ENST00000558500 KIF7Q2M1P5 1343 aa9.09□□□□□ -0.95
LRRC28-207ENST00000558500 PPEF1O14829 653 aaPredicted RBP9.09□□□□□ -0.95
LRRC28-207ENST00000558500 AOC3Q16853 763 aa9.09□□□□□ -0.95
LRRC28-207ENST00000558500 CDC37L1Q7L3B6 337 aa9.09□□□□□ -0.95
LRRC28-207ENST00000558500 NUTM1Q86Y26 1132 aa9.09□□□□□ -0.95
LRRC28-207ENST00000558500 CRAMP1Q96RY5 1269 aa9.09□□□□□ -0.95
LRRC28-207ENST00000558500 NYXQ9GZU5 481 aa9.09□□□□□ -0.95
LRRC28-207ENST00000558500 VPS33BQ9H267 617 aa9.09□□□□□ -0.95
LRRC28-207ENST00000558500 ZNRF3Q9ULT6 936 aa9.09□□□□□ -0.95
LRRC28-207ENST00000558500 TIMELESSQ9UNS1 1208 aa9.09□□□□□ -0.95
LRRC28-207ENST00000558500 CACNA1SQ13698 1873 aa9.08□□□□□ -0.96
LRRC28-207ENST00000558500 CDHR2Q9BYE9 1310 aa9.08□□□□□ -0.96
LRRC28-207ENST00000558500 RIC1Q4ADV7 1423 aa9.08□□□□□ -0.96
LRRC28-207ENST00000558500 FAM155AB1AL88 458 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-207ENST00000558500 TCERG1O14776 1098 aaKnown RBP9.08□□□□□ -0.96
LRRC28-207ENST00000558500 U2SURPO15042 1029 aaKnown RBP9.08□□□□□ -0.96
LRRC28-207ENST00000558500 HSPA5P11021 654 aaKnown RBP9.08□□□□□ -0.96
LRRC28-207ENST00000558500 EIF4G2P78344 907 aaKnown RBP eCLIP9.08□□□□□ -0.96
LRRC28-207ENST00000558500 RGMBQ6NW40 437 aa9.08□□□□□ -0.96
LRRC28-207ENST00000558500 CTU1Q7Z7A3 348 aaKnown RBP9.08□□□□□ -0.96
LRRC28-207ENST00000558500 TRPM4Q8TD43 1214 aa9.08□□□□□ -0.96
LRRC28-207ENST00000558500 RBM17Q96I25 401 aaKnown RBP9.08□□□□□ -0.96
LRRC28-207ENST00000558500 RNF186Q9NXI6 227 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms