RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 UBN2Q6ZU65 1347 aa11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 HOXB7P09629 217 aa11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 GPTP24298 496 aa11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 PRELPP51888 382 aa11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 C1QTNF8P60827 252 aa11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 GNAI1P63096 354 aa11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 RASSF7Q02833 373 aa11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 CALD1Q05682 793 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 DUSP27Q5VZP5 1158 aa11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 COPS6Q7L5N1 327 aa11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 ZNF526Q8TF50 670 aaPredicted RBP11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 XAGE3Q8WTP9 111 aa11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 CNKSR1Q969H4 720 aa11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 MASTLQ96GX5 879 aa11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 GPBP1L1Q9HC44 474 aaPredicted RBP11.43□□□□□ -0.58
SNRPA1-206ENST00000558059 SENP3-EIF4A1A0A087X0R7 540 aa11.42□□□□□ -0.58
SNRPA1-206ENST00000558059 NFKBIEO00221 500 aa11.42□□□□□ -0.58
SNRPA1-206ENST00000558059 C21orf2O43822 256 aa11.42□□□□□ -0.58
SNRPA1-206ENST00000558059 CLCN6P51797 869 aa11.42□□□□□ -0.58
SNRPA1-206ENST00000558059 HDGFL1Q5TGJ6 251 aa11.42□□□□□ -0.58
SNRPA1-206ENST00000558059 SUSD4Q5VX71 490 aa11.42□□□□□ -0.58
SNRPA1-206ENST00000558059 NUTM1Q86Y26 1132 aa11.42□□□□□ -0.58
SNRPA1-206ENST00000558059 NYXQ9GZU5 481 aa11.42□□□□□ -0.58
SNRPA1-206ENST00000558059 RNF181Q9P0P0 153 aa11.42□□□□□ -0.58
SNRPA1-206ENST00000558059 CHPF2Q9P2E5 772 aa11.42□□□□□ -0.58
SNRPA1-206ENST00000558059 ABCC12Q96J65 1359 aa11.41□□□□□ -0.58
SNRPA1-206ENST00000558059 IBTKQ9P2D0 1353 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-206ENST00000558059 DICER1Q9UPY3 1922 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-206ENST00000558059 TNRC6CQ9HCJ0 1690 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-206ENST00000558059 NPR1P16066 1061 aa11.41□□□□□ -0.58
SNRPA1-206ENST00000558059 GTF2E1P29083 439 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-206ENST00000558059 AIMP1Q12904 312 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-206ENST00000558059 CCDC27Q2M243 656 aa11.41□□□□□ -0.58
SNRPA1-206ENST00000558059 ERFEQ4G0M1 354 aa11.41□□□□□ -0.58
SNRPA1-206ENST00000558059 PRPF40BQ6NWY9 871 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-206ENST00000558059 C7orf43Q8WVR3 580 aa11.41□□□□□ -0.58
SNRPA1-206ENST00000558059 ANKRD36CQ5JPF3 1778 aa11.41□□□□□ -0.58
SNRPA1-206ENST00000558059 NTSR2O95665 410 aa11.4□□□□□ -0.58
SNRPA1-206ENST00000558059 LMNB1P20700 586 aa11.4□□□□□ -0.58
SNRPA1-206ENST00000558059 CRY2Q49AN0 593 aa11.4□□□□□ -0.58
SNRPA1-206ENST00000558059 PARP10Q53GL7 1025 aa11.4□□□□□ -0.58
SNRPA1-206ENST00000558059 WWC1Q8IX03 1113 aa11.4□□□□□ -0.58
SNRPA1-206ENST00000558059 ZNF579Q8NAF0 562 aaKnown RBP11.4□□□□□ -0.58
SNRPA1-206ENST00000558059 C8orf58Q8NAV2 365 aa11.4□□□□□ -0.58
SNRPA1-206ENST00000558059 DBF4Q9UBU7 674 aaPredicted RBP11.4□□□□□ -0.58
SNRPA1-206ENST00000558059 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
SNRPA1-206ENST00000558059 KIF3CO14782 793 aa11.39□□□□□ -0.59
SNRPA1-206ENST00000558059 TCIRG1Q13488 830 aa11.39□□□□□ -0.59
SNRPA1-206ENST00000558059 RIC1Q4ADV7 1423 aa11.39□□□□□ -0.59
SNRPA1-206ENST00000558059 PPP1R42Q7Z4L9 355 aa11.39□□□□□ -0.59
SNRPA1-206ENST00000558059 CEP350Q5VT06 3117 aa11.38□□□□□ -0.59
SNRPA1-206ENST00000558059 HOXA10P31260 410 aaPredicted RBP11.38□□□□□ -0.59
SNRPA1-206ENST00000558059 HSP90AB3PQ58FF7 597 aa11.38□□□□□ -0.59
SNRPA1-206ENST00000558059 SLC10A5Q5PT55 438 aa11.38□□□□□ -0.59
SNRPA1-206ENST00000558059 ANKRD13DQ6ZTN6 518 aa11.38□□□□□ -0.59
SNRPA1-206ENST00000558059 C3orf67Q6ZVT6 689 aa11.38□□□□□ -0.59
SNRPA1-206ENST00000558059 NLRP10Q86W26 655 aa11.38□□□□□ -0.59
SNRPA1-206ENST00000558059 TSPYL6Q8N831 410 aa11.38□□□□□ -0.59
SNRPA1-206ENST00000558059 PLBD2Q8NHP8 589 aa11.38□□□□□ -0.59
SNRPA1-206ENST00000558059 UTP14AQ9BVJ6 771 aaKnown RBP11.38□□□□□ -0.59
SNRPA1-206ENST00000558059 NMRK2Q9NPI5 230 aa11.38□□□□□ -0.59
SNRPA1-206ENST00000558059 HYPKQ9NX55 129 aa11.38□□□□□ -0.59
SNRPA1-206ENST00000558059 LTBP3Q9NS15 1303 aa11.37□□□□□ -0.59
SNRPA1-206ENST00000558059 ZC3H4Q9UPT8 1303 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-206ENST00000558059 ALDH1B1P30837 517 aa11.37□□□□□ -0.59
SNRPA1-206ENST00000558059 SOGA3Q5TF21 947 aa11.37□□□□□ -0.59
SNRPA1-206ENST00000558059 OLFM4Q6UX06 510 aa11.37□□□□□ -0.59
SNRPA1-206ENST00000558059 SYNE4Q8N205 404 aa11.37□□□□□ -0.59
SNRPA1-206ENST00000558059 TSR2Q969E8 191 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-206ENST00000558059 ISCA1Q9BUE6 129 aa11.37□□□□□ -0.59
SNRPA1-206ENST00000558059 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
SNRPA1-206ENST00000558059 IL16Q14005 1332 aa11.36□□□□□ -0.59
SNRPA1-206ENST00000558059 TAOK3Q9H2K8 898 aa11.36□□□□□ -0.59
SNRPA1-206ENST00000558059 PHAXQ9H814 394 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-206ENST00000558059 LAMB2P55268 1798 aa11.36□□□□□ -0.59
SNRPA1-206ENST00000558059 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
SNRPA1-206ENST00000558059 TIAM2Q8IVF5 1701 aa11.35□□□□□ -0.59
SNRPA1-206ENST00000558059 CCDC93Q567U6 631 aa11.35□□□□□ -0.59
SNRPA1-206ENST00000558059 FAM9BQ8IZU0 186 aa11.35□□□□□ -0.59
SNRPA1-206ENST00000558059 RPGRQ92834 1020 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-206ENST00000558059 NLRP3Q96P20 1036 aa11.35□□□□□ -0.59
SNRPA1-206ENST00000558059 CRAMP1Q96RY5 1269 aa11.35□□□□□ -0.59
SNRPA1-206ENST00000558059 TRMT112Q9UI30 125 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-206ENST00000558059 SALL2Q9Y467 1007 aaPredicted RBP11.35□□□□□ -0.59
SNRPA1-206ENST00000558059 CACNA1FO60840 1977 aa11.35□□□□□ -0.59
SNRPA1-206ENST00000558059 SNED1Q8TER0 1413 aa11.35□□□□□ -0.59
SNRPA1-206ENST00000558059 KDM2BQ8NHM5 1336 aa11.35□□□□□ -0.59
SNRPA1-206ENST00000558059 TAF1P21675 1872 aa11.34□□□□□ -0.59
SNRPA1-206ENST00000558059 GLTPD2A6NH11 291 aa11.34□□□□□ -0.59
SNRPA1-206ENST00000558059 ATP5J2-PTCD1G3V325 749 aa11.34□□□□□ -0.59
SNRPA1-206ENST00000558059 HCLS1P14317 486 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-206ENST00000558059 TRIM28Q13263 835 aaKnown RBP11.34□□□□□ -0.59
SNRPA1-206ENST00000558059 CCDC30Q5VVM6 783 aa11.34□□□□□ -0.59
SNRPA1-206ENST00000558059 WDR63Q8IWG1 891 aa11.34□□□□□ -0.59
SNRPA1-206ENST00000558059 ZNF428Q96B54 188 aa11.34□□□□□ -0.59
SNRPA1-206ENST00000558059 RRAGCQ9HB90 399 aa11.34□□□□□ -0.59
SNRPA1-206ENST00000558059 SH3TC1Q8TE82 1336 aa11.34□□□□□ -0.59
SNRPA1-206ENST00000558059 FKBP4Q02790 459 aaKnown RBP eCLIP11.33□□□□□ -0.6
SNRPA1-206ENST00000558059 SLC51AQ86UW1 340 aa11.33□□□□□ -0.6
SNRPA1-206ENST00000558059 RTKN2Q8IZC4 609 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms