RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 NTSR2O95665 410 aa21.34■■□□□ 1.01
PBX4-202ENST00000557978 MRPL50Q8N5N7 158 aaKnown RBP21.34■■□□□ 1.01
PBX4-202ENST00000557978 COL11A2P13942 1736 aaPredicted RBP21.33■■□□□ 1.01
PBX4-202ENST00000557978 MYH3P11055 1940 aa21.33■■□□□ 1.01
PBX4-202ENST00000557978 LAMB2P55268 1798 aa21.33■■□□□ 1.01
PBX4-202ENST00000557978 H0YIN7 160 aa21.33■■□□□ 1.01
PBX4-202ENST00000557978 DPEP1P16444 411 aa21.33■■□□□ 1.01
PBX4-202ENST00000557978 CCDC24Q8N4L8 307 aa21.33■■□□□ 1.01
PBX4-202ENST00000557978 CCDC191Q8NCU4 936 aa21.33■■□□□ 1.01
PBX4-202ENST00000557978 DNAAF4Q8WXU2 420 aa21.33■■□□□ 1.01
PBX4-202ENST00000557978 SMC4Q9NTJ3 1288 aa21.33■■□□□ 1.01
PBX4-202ENST00000557978 TRMT112Q9UI30 125 aaKnown RBP21.33■■□□□ 1.01
PBX4-202ENST00000557978 CHD4Q14839 1912 aa21.32■■□□□ 1
PBX4-202ENST00000557978 NUTM1Q86Y26 1132 aa21.32■■□□□ 1
PBX4-202ENST00000557978 RIC1Q4ADV7 1423 aa21.32■■□□□ 1
PBX4-202ENST00000557978 DDX60Q8IY21 1712 aaKnown RBP21.31■■□□□ 1
PBX4-202ENST00000557978 ERFEQ4G0M1 354 aa21.31■■□□□ 1
PBX4-202ENST00000557978 C2CD5Q86YS7 1000 aa21.31■■□□□ 1
PBX4-202ENST00000557978 PIM2Q9P1W9 311 aa21.31■■□□□ 1
PBX4-202ENST00000557978 PTPRCP08575 1304 aa21.31■■□□□ 1
PBX4-202ENST00000557978 SH3TC1Q8TE82 1336 aa21.31■■□□□ 1
PBX4-202ENST00000557978 GPR162Q16538 588 aa21.3■■□□□ 1
PBX4-202ENST00000557978 BCL2L13Q9BXK5 485 aa21.3■■□□□ 1
PBX4-202ENST00000557978 CWC25Q9NXE8 425 aaPredicted RBP21.3■■□□□ 1
PBX4-202ENST00000557978 TNRC6CQ9HCJ0 1690 aaKnown RBP21.3■■□□□ 1
PBX4-202ENST00000557978 KCNA3P22001 575 aa21.29■■□□□ 1
PBX4-202ENST00000557978 CHRNA5P30532 468 aa21.29■■□□□ 1
PBX4-202ENST00000557978 RARSP54136 660 aaKnown RBP21.29■■□□□ 1
PBX4-202ENST00000557978 BRPF1P55201 1214 aaPredicted RBP21.29■■□□□ 1
PBX4-202ENST00000557978 PELP1Q8IZL8 1130 aaKnown RBP21.29■■□□□ 1
PBX4-202ENST00000557978 UTRNP46939 3433 aa21.29■■□□□ 1
PBX4-202ENST00000557978 KLRG2A4D1S0 409 aaPredicted RBP21.29■■□□□ 1
PBX4-202ENST00000557978 SLC10A5Q5PT55 438 aa21.29■■□□□ 1
PBX4-202ENST00000557978 NLRP3Q96P20 1036 aa21.29■■□□□ 1
PBX4-202ENST00000557978 IGKV5-2P06315 115 aa21.28■■□□□ 1
PBX4-202ENST00000557978 HSP90B1P14625 803 aaKnown RBP21.28■■□□□ 1
PBX4-202ENST00000557978 LINS1Q8NG48 757 aa21.28■■□□□ 1
PBX4-202ENST00000557978 ABCC12Q96J65 1359 aa21.27■■□□□ 1
PBX4-202ENST00000557978 SRGNP10124 158 aa21.27■■□□□ 1
PBX4-202ENST00000557978 ZBTB38Q8NAP3 1195 aaPredicted RBP21.27■■□□□ 1
PBX4-202ENST00000557978 MASTLQ96GX5 879 aa21.27■■□□□ 1
PBX4-202ENST00000557978 NEURL1BA8MQ27 555 aa21.26■□□□□ 0.99
PBX4-202ENST00000557978 F6X3S4 739 aa21.26■□□□□ 0.99
PBX4-202ENST00000557978 GRIN3BO60391 1043 aa21.26■□□□□ 0.99
PBX4-202ENST00000557978 DALRD3Q5D0E6 543 aaKnown RBP21.26■□□□□ 0.99
PBX4-202ENST00000557978 ZNF622Q969S3 477 aaKnown RBP eCLIP21.26■□□□□ 0.99
PBX4-202ENST00000557978 FAM89AQ96GI7 184 aa21.26■□□□□ 0.99
PBX4-202ENST00000557978 SLX4Q8IY92 1834 aa21.25■□□□□ 0.99
PBX4-202ENST00000557978 PCCAP05165 728 aaPredicted RBP21.25■□□□□ 0.99
PBX4-202ENST00000557978 NPR1P16066 1061 aa21.25■□□□□ 0.99
PBX4-202ENST00000557978 CWF19L2Q2TBE0 894 aaKnown RBP21.25■□□□□ 0.99
PBX4-202ENST00000557978 STYK1Q6J9G0 422 aa21.25■□□□□ 0.99
PBX4-202ENST00000557978 TTLL6Q8N841 843 aa21.25■□□□□ 0.99
PBX4-202ENST00000557978 YTHDC1Q96MU7 727 aaKnown RBP21.25■□□□□ 0.99
PBX4-202ENST00000557978 BCS1LQ9Y276 419 aa21.25■□□□□ 0.99
PBX4-202ENST00000557978 KIF16BQ96L93 1317 aa21.25■□□□□ 0.99
PBX4-202ENST00000557978 CRY2Q49AN0 593 aa21.24■□□□□ 0.99
PBX4-202ENST00000557978 SLC4A10Q6U841 1118 aa21.24■□□□□ 0.99
PBX4-202ENST00000557978 CNKSR1Q969H4 720 aa21.24■□□□□ 0.99
PBX4-202ENST00000557978 WWC3Q9ULE0 1092 aa21.24■□□□□ 0.99
PBX4-202ENST00000557978 ALDH1B1P30837 517 aa21.23■□□□□ 0.99
PBX4-202ENST00000557978 BEND3Q5T5X7 828 aa21.23■□□□□ 0.99
PBX4-202ENST00000557978 NOB1Q9ULX3 412 aaKnown RBP21.23■□□□□ 0.99
PBX4-202ENST00000557978 TAF1P21675 1872 aa21.23■□□□□ 0.99
PBX4-202ENST00000557978 IRS4O14654 1257 aaPredicted RBP21.22■□□□□ 0.99
PBX4-202ENST00000557978 IPO8O15397 1037 aaKnown RBP21.22■□□□□ 0.99
PBX4-202ENST00000557978 HCLS1P14317 486 aaPredicted RBP21.22■□□□□ 0.99
PBX4-202ENST00000557978 YBX3P16989 372 aaKnown RBP eCLIP21.22■□□□□ 0.99
PBX4-202ENST00000557978 GCKRQ14397 625 aa21.22■□□□□ 0.99
PBX4-202ENST00000557978 RTL5Q5HYW3 569 aaPredicted RBP21.22■□□□□ 0.99
PBX4-202ENST00000557978 SYNE4Q8N205 404 aa21.22■□□□□ 0.99
PBX4-202ENST00000557978 ARHGAP45Q92619 1136 aa21.22■□□□□ 0.99
PBX4-202ENST00000557978 RPGRQ92834 1020 aaKnown RBP21.22■□□□□ 0.99
PBX4-202ENST00000557978 API5Q9BZZ5 524 aaKnown RBP21.22■□□□□ 0.99
PBX4-202ENST00000557978 SRCIN1Q9C0H9 1055 aa21.22■□□□□ 0.99
PBX4-202ENST00000557978 CCDC88AQ3V6T2 1871 aa21.22■□□□□ 0.99
PBX4-202ENST00000557978 CDHR2Q9BYE9 1310 aa21.21■□□□□ 0.99
PBX4-202ENST00000557978 ALDH1L1O75891 902 aa21.21■□□□□ 0.99
PBX4-202ENST00000557978 RBM17Q96I25 401 aaKnown RBP21.21■□□□□ 0.99
PBX4-202ENST00000557978 H7C1W4 665 aa21.2■□□□□ 0.98
PBX4-202ENST00000557978 BCAR3O75815 825 aa21.2■□□□□ 0.98
PBX4-202ENST00000557978 HOXA10P31260 410 aaPredicted RBP21.2■□□□□ 0.98
PBX4-202ENST00000557978 SBF1O95248 1867 aa21.19■□□□□ 0.98
PBX4-202ENST00000557978 FER1L6Q2WGJ9 1857 aa21.19■□□□□ 0.98
PBX4-202ENST00000557978 PDE8AO60658 829 aa21.19■□□□□ 0.98
PBX4-202ENST00000557978 UBE3BQ7Z3V4 1068 aa21.18■□□□□ 0.98
PBX4-202ENST00000557978 CRAMP1Q96RY5 1269 aa21.18■□□□□ 0.98
PBX4-202ENST00000557978 C9orf78Q9NZ63 289 aaPredicted RBP21.18■□□□□ 0.98
PBX4-202ENST00000557978 SF3B3Q15393 1217 aaKnown RBP21.17■□□□□ 0.98
PBX4-202ENST00000557978 PRPF40BQ6NWY9 871 aaKnown RBP21.17■□□□□ 0.98
PBX4-202ENST00000557978 C3orf67Q6ZVT6 689 aa21.17■□□□□ 0.98
PBX4-202ENST00000557978 DDX46Q7L014 1031 aaKnown RBP21.17■□□□□ 0.98
PBX4-202ENST00000557978 FRAT1Q92837 279 aaPredicted RBP21.17■□□□□ 0.98
PBX4-202ENST00000557978 JARID2Q92833 1246 aaPredicted RBP21.16■□□□□ 0.98
PBX4-202ENST00000557978 GRM8O00222 908 aa21.15■□□□□ 0.98
PBX4-202ENST00000557978 CCT4P50991 539 aaKnown RBP21.15■□□□□ 0.98
PBX4-202ENST00000557978 SOGA3Q5TF21 947 aa21.15■□□□□ 0.98
PBX4-202ENST00000557978 ZKSCAN2Q63HK3 967 aa21.15■□□□□ 0.98
PBX4-202ENST00000557978 ATF7IPQ6VMQ6 1270 aa21.15■□□□□ 0.98
PBX4-202ENST00000557978 CCDC152Q4G0S7 254 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms