RNA–Protein interactions for RNA: ENST00000557943.5

ETFA-203, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ETFA, Length 2,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-203ENST00000557943 RUFY2Q8WXA3 655 aa20.43■□□□□ 0.86
ETFA-203ENST00000557943 GRPEL1Q9HAV7 217 aa20.43■□□□□ 0.86
ETFA-203ENST00000557943 UBR2Q8IWV8 1755 aa20.43■□□□□ 0.86
ETFA-203ENST00000557943 SHANK3Q9BYB0 1731 aa20.43■□□□□ 0.86
ETFA-203ENST00000557943 CPA1P15085 419 aa20.42■□□□□ 0.86
ETFA-203ENST00000557943 TTLL7Q6ZT98 887 aa20.42■□□□□ 0.86
ETFA-203ENST00000557943 FAM227BQ96M60 508 aa20.42■□□□□ 0.86
ETFA-203ENST00000557943 LARP6Q9BRS8 491 aaKnown RBP20.42■□□□□ 0.86
ETFA-203ENST00000557943 KCPQ6ZWJ8 1503 aa20.42■□□□□ 0.86
ETFA-203ENST00000557943 IL2RBP14784 551 aa20.42■□□□□ 0.86
ETFA-203ENST00000557943 MRE11P49959 708 aa20.42■□□□□ 0.86
ETFA-203ENST00000557943 A1BGP04217 495 aa20.41■□□□□ 0.86
ETFA-203ENST00000557943 PTPN12Q05209 780 aaKnown RBP20.41■□□□□ 0.86
ETFA-203ENST00000557943 NMIQ13287 307 aaPredicted RBP20.41■□□□□ 0.86
ETFA-203ENST00000557943 INTS4Q96HW7 963 aaKnown RBP20.41■□□□□ 0.86
ETFA-203ENST00000557943 TTC14Q96N46 770 aa20.41■□□□□ 0.86
ETFA-203ENST00000557943 CASP7P55210 303 aa20.41■□□□□ 0.86
ETFA-203ENST00000557943 PRPF40BQ6NWY9 871 aaKnown RBP20.41■□□□□ 0.86
ETFA-203ENST00000557943 CARD10Q9BWT7 1032 aa20.41■□□□□ 0.86
ETFA-203ENST00000557943 COPRSQ9NQ92 184 aa20.41■□□□□ 0.86
ETFA-203ENST00000557943 ERVV-2B6SEH9 535 aa20.4■□□□□ 0.86
ETFA-203ENST00000557943 PRPF40AO75400 957 aaKnown RBP20.4■□□□□ 0.86
ETFA-203ENST00000557943 AK2P54819 239 aa20.4■□□□□ 0.86
ETFA-203ENST00000557943 TFCP2Q12800 502 aa20.4■□□□□ 0.86
ETFA-203ENST00000557943 RABL6Q3YEC7 729 aaPredicted RBP20.4■□□□□ 0.86
ETFA-203ENST00000557943 PAPPAQ13219 1627 aa20.4■□□□□ 0.86
ETFA-203ENST00000557943 BRD1O95696 1058 aa20.39■□□□□ 0.86
ETFA-203ENST00000557943 NCLP19338 710 aaKnown RBP20.39■□□□□ 0.86
ETFA-203ENST00000557943 CASTP20810 708 aaKnown RBP20.39■□□□□ 0.85
ETFA-203ENST00000557943 EDC3Q96F86 508 aaKnown RBP20.39■□□□□ 0.85
ETFA-203ENST00000557943 FSD1Q9BTV5 496 aa20.39■□□□□ 0.85
ETFA-203ENST00000557943 CCDC171Q6TFL3 1326 aa20.39■□□□□ 0.85
ETFA-203ENST00000557943 NUP188Q5SRE5 1749 aa20.38■□□□□ 0.85
ETFA-203ENST00000557943 KDM4FA0A1W2PPD8 638 aa20.38■□□□□ 0.85
ETFA-203ENST00000557943 A0A0D9SFI3 127 aa20.38■□□□□ 0.85
ETFA-203ENST00000557943 EVA1CP58658 441 aa20.38■□□□□ 0.85
ETFA-203ENST00000557943 NKX1-1Q15270 411 aaPredicted RBP20.38■□□□□ 0.85
ETFA-203ENST00000557943 ADCK5Q3MIX3 580 aa20.38■□□□□ 0.85
ETFA-203ENST00000557943 RUFY3Q7L099 469 aa20.38■□□□□ 0.85
ETFA-203ENST00000557943 DBNLQ9UJU6 430 aaKnown RBP20.38■□□□□ 0.85
ETFA-203ENST00000557943 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
ETFA-203ENST00000557943 TNNI3KQ59H18 835 aa20.37■□□□□ 0.85
ETFA-203ENST00000557943 LMBR1LQ6UX01 489 aa20.37■□□□□ 0.85
ETFA-203ENST00000557943 ZBTB3Q9H5J0 574 aa20.37■□□□□ 0.85
ETFA-203ENST00000557943 FPGT-TNNI3KV9GXZ4 949 aa20.37■□□□□ 0.85
ETFA-203ENST00000557943 COL15A1P39059 1388 aa20.37■□□□□ 0.85
ETFA-203ENST00000557943 TOGARAM1Q9Y4F4 1720 aa20.37■□□□□ 0.85
ETFA-203ENST00000557943 CAVIN1Q6NZI2 390 aaKnown RBP20.37■□□□□ 0.85
ETFA-203ENST00000557943 JAKMIP1Q96N16 626 aaKnown RBP20.37■□□□□ 0.85
ETFA-203ENST00000557943 ISY1Q9ULR0 285 aaKnown RBP20.37■□□□□ 0.85
ETFA-203ENST00000557943 CHMP3Q9Y3E7 222 aa20.37■□□□□ 0.85
ETFA-203ENST00000557943 TJP1Q07157 1748 aa20.36■□□□□ 0.85
ETFA-203ENST00000557943 GPT2Q8TD30 523 aa20.36■□□□□ 0.85
ETFA-203ENST00000557943 RBM8AQ9Y5S9 174 aaKnown RBP20.36■□□□□ 0.85
ETFA-203ENST00000557943 NDUFB9Q9Y6M9 179 aa20.36■□□□□ 0.85
ETFA-203ENST00000557943 HIP1O00291 1037 aa20.35■□□□□ 0.85
ETFA-203ENST00000557943 LARGE1O95461 756 aa20.35■□□□□ 0.85
ETFA-203ENST00000557943 FOXO4P98177 505 aa20.35■□□□□ 0.85
ETFA-203ENST00000557943 H7C1W4 665 aa20.34■□□□□ 0.85
ETFA-203ENST00000557943 NECTIN1Q15223 517 aa20.34■□□□□ 0.85
ETFA-203ENST00000557943 TNS2Q63HR2 1409 aa20.34■□□□□ 0.85
ETFA-203ENST00000557943 RPAP1Q9BWH6 1393 aaPredicted RBP20.34■□□□□ 0.85
ETFA-203ENST00000557943 FOXD4L6Q3SYB3 417 aaPredicted RBP20.34■□□□□ 0.85
ETFA-203ENST00000557943 CREB3L3Q68CJ9 461 aa20.34■□□□□ 0.85
ETFA-203ENST00000557943 FOXD4L3Q6VB84 417 aaPredicted RBP20.34■□□□□ 0.85
ETFA-203ENST00000557943 KCNB2Q92953 911 aa20.34■□□□□ 0.85
ETFA-203ENST00000557943 DBNDD2Q9BQY9 259 aa20.34■□□□□ 0.85
ETFA-203ENST00000557943 CWC25Q9NXE8 425 aaPredicted RBP20.34■□□□□ 0.85
ETFA-203ENST00000557943 RBM27Q9P2N5 1060 aaKnown RBP20.34■□□□□ 0.85
ETFA-203ENST00000557943 LIMCH1Q9UPQ0 1083 aa20.34■□□□□ 0.85
ETFA-203ENST00000557943 CCDC9Q9Y3X0 531 aaKnown RBP20.34■□□□□ 0.85
ETFA-203ENST00000557943 NHSL1Q5SYE7 1610 aa20.33■□□□□ 0.85
ETFA-203ENST00000557943 KCNJ4P48050 445 aa20.33■□□□□ 0.85
ETFA-203ENST00000557943 DTNBO60941 627 aa20.33■□□□□ 0.84
ETFA-203ENST00000557943 PDRG1Q9NUG6 133 aa20.33■□□□□ 0.84
ETFA-203ENST00000557943 NSFL1CQ9UNZ2 370 aaKnown RBP20.33■□□□□ 0.84
ETFA-203ENST00000557943 COL9A3Q14050 684 aaPredicted RBP20.32■□□□□ 0.84
ETFA-203ENST00000557943 ZNF589Q86UQ0 364 aaPredicted RBP20.32■□□□□ 0.84
ETFA-203ENST00000557943 MAP4K1Q92918 833 aa20.32■□□□□ 0.84
ETFA-203ENST00000557943 MED23Q9ULK4 1368 aa20.32■□□□□ 0.84
ETFA-203ENST00000557943 ATP5JP18859 108 aa20.32■□□□□ 0.84
ETFA-203ENST00000557943 ZSCAN23Q3MJ62 389 aa20.32■□□□□ 0.84
ETFA-203ENST00000557943 ZSWIM6Q9HCJ5 1215 aa20.32■□□□□ 0.84
ETFA-203ENST00000557943 SNRKQ9NRH2 765 aa20.32■□□□□ 0.84
ETFA-203ENST00000557943 SLC27A2O14975 620 aa20.31■□□□□ 0.84
ETFA-203ENST00000557943 CHGBP05060 677 aa20.31■□□□□ 0.84
ETFA-203ENST00000557943 ZNF330Q9Y3S2 320 aaPredicted RBP20.31■□□□□ 0.84
ETFA-203ENST00000557943 DNAJC2Q99543 621 aaKnown RBP20.3■□□□□ 0.84
ETFA-203ENST00000557943 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
ETFA-203ENST00000557943 CYP46A1Q9Y6A2 500 aa20.3■□□□□ 0.84
ETFA-203ENST00000557943 TAF6LQ9Y6J9 622 aa20.3■□□□□ 0.84
ETFA-203ENST00000557943 FAM43AQ8N2R8 423 aa20.3■□□□□ 0.84
ETFA-203ENST00000557943 TM6SF1Q9BZW5 370 aa20.3■□□□□ 0.84
ETFA-203ENST00000557943 ZKSCAN1P17029 563 aaPredicted RBP20.29■□□□□ 0.84
ETFA-203ENST00000557943 VPS53Q5VIR6 699 aa20.29■□□□□ 0.84
ETFA-203ENST00000557943 CCDC83Q8IWF9 413 aa20.29■□□□□ 0.84
ETFA-203ENST00000557943 WDR33Q9C0J8 1336 aaKnown RBP20.29■□□□□ 0.84
ETFA-203ENST00000557943 ATG9AQ7Z3C6 839 aa20.29■□□□□ 0.84
ETFA-203ENST00000557943 ZNF594Q96JF6 807 aaPredicted RBP20.29■□□□□ 0.84
ETFA-203ENST00000557943 BTG4Q9NY30 223 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms