RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 HSP90AB4PQ58FF6 505 aa15.9■□□□□ 0.14
CPNE6-204ENST00000557829 KIF1BPQ96EK5 621 aa15.9■□□□□ 0.14
CPNE6-204ENST00000557829 CCDC9Q9Y3X0 531 aaKnown RBP15.9■□□□□ 0.14
CPNE6-204ENST00000557829 RAD50Q92878 1312 aa15.9■□□□□ 0.14
CPNE6-204ENST00000557829 USP42Q9H9J4 1324 aaKnown RBP15.9■□□□□ 0.14
CPNE6-204ENST00000557829 MRC1P22897 1456 aa15.9■□□□□ 0.14
CPNE6-204ENST00000557829 SGSM2O43147 1006 aa15.89■□□□□ 0.13
CPNE6-204ENST00000557829 LETM1O95202 739 aaPredicted RBP15.89■□□□□ 0.13
CPNE6-204ENST00000557829 TCHHQ07283 1943 aa15.89■□□□□ 0.13
CPNE6-204ENST00000557829 PI4K2BQ8TCG2 481 aa15.89■□□□□ 0.13
CPNE6-204ENST00000557829 RHPN1Q8TCX5 695 aa15.89■□□□□ 0.13
CPNE6-204ENST00000557829 CABP4P57796 275 aa15.88■□□□□ 0.13
CPNE6-204ENST00000557829 CNTROBQ8N137 903 aa15.88■□□□□ 0.13
CPNE6-204ENST00000557829 HDGFL1Q5TGJ6 251 aa15.87■□□□□ 0.13
CPNE6-204ENST00000557829 PPP1R42Q7Z4L9 355 aa15.87■□□□□ 0.13
CPNE6-204ENST00000557829 TTC14Q96N46 770 aa15.87■□□□□ 0.13
CPNE6-204ENST00000557829 ZMYND15Q9H091 742 aa15.87■□□□□ 0.13
CPNE6-204ENST00000557829 THRAP3Q9Y2W1 955 aaKnown RBP15.87■□□□□ 0.13
CPNE6-204ENST00000557829 SURF6O75683 361 aaKnown RBP15.87■□□□□ 0.13
CPNE6-204ENST00000557829 FOXD4L5Q5VV16 416 aaPredicted RBP15.87■□□□□ 0.13
CPNE6-204ENST00000557829 ZNF790Q6PG37 636 aa15.87■□□□□ 0.13
CPNE6-204ENST00000557829 FOXD4L4Q8WXT5 416 aaPredicted RBP15.87■□□□□ 0.13
CPNE6-204ENST00000557829 CHAMP1Q96JM3 812 aa15.87■□□□□ 0.13
CPNE6-204ENST00000557829 TRPC5Q9UL62 973 aaPredicted RBP15.87■□□□□ 0.13
CPNE6-204ENST00000557829 TTC41PQ6P2S7 1318 aa15.87■□□□□ 0.13
CPNE6-204ENST00000557829 RPAP1Q9BWH6 1393 aaPredicted RBP15.87■□□□□ 0.13
CPNE6-204ENST00000557829 VPS72Q15906 364 aa15.86■□□□□ 0.13
CPNE6-204ENST00000557829 USP48Q86UV5 1035 aa15.86■□□□□ 0.13
CPNE6-204ENST00000557829 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.86■□□□□ 0.13
CPNE6-204ENST00000557829 PRAMEF22A3QJZ6 481 aa15.86■□□□□ 0.13
CPNE6-204ENST00000557829 EXOC5O00471 708 aa15.86■□□□□ 0.13
CPNE6-204ENST00000557829 MTERF4Q7Z6M4 381 aaKnown RBP15.86■□□□□ 0.13
CPNE6-204ENST00000557829 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
CPNE6-204ENST00000557829 UPF3BQ9BZI7 483 aaKnown RBP15.86■□□□□ 0.13
CPNE6-204ENST00000557829 LSG1Q9H089 658 aaKnown RBP15.86■□□□□ 0.13
CPNE6-204ENST00000557829 SNX14Q9Y5W7 946 aa15.86■□□□□ 0.13
CPNE6-204ENST00000557829 HEG1Q9ULI3 1381 aa15.86■□□□□ 0.13
CPNE6-204ENST00000557829 WNK3Q9BYP7 1800 aa15.85■□□□□ 0.13
CPNE6-204ENST00000557829 ERVV-2B6SEH9 535 aa15.85■□□□□ 0.13
CPNE6-204ENST00000557829 NUTM1Q86Y26 1132 aa15.85■□□□□ 0.13
CPNE6-204ENST00000557829 GJD4Q96KN9 370 aaPredicted RBP15.85■□□□□ 0.13
CPNE6-204ENST00000557829 IL1RAPL2Q9NP60 686 aa15.85■□□□□ 0.13
CPNE6-204ENST00000557829 LIMCH1Q9UPQ0 1083 aa15.85■□□□□ 0.13
CPNE6-204ENST00000557829 ATP6V1DQ9Y5K8 247 aa15.85■□□□□ 0.13
CPNE6-204ENST00000557829 TNS2Q63HR2 1409 aa15.85■□□□□ 0.13
CPNE6-204ENST00000557829 EIF2S2P20042 333 aaKnown RBP15.85■□□□□ 0.13
CPNE6-204ENST00000557829 RXRBP28702 533 aa15.85■□□□□ 0.13
CPNE6-204ENST00000557829 CCDC183Q5T5S1 534 aa15.85■□□□□ 0.13
CPNE6-204ENST00000557829 BARGINQ6ZT62 677 aa15.85■□□□□ 0.13
CPNE6-204ENST00000557829 CDCA7Q9BWT1 371 aaPredicted RBP15.85■□□□□ 0.13
CPNE6-204ENST00000557829 GIGYF1O75420 1035 aaPredicted RBP15.84■□□□□ 0.13
CPNE6-204ENST00000557829 ZSCAN22P10073 491 aaPredicted RBP15.84■□□□□ 0.13
CPNE6-204ENST00000557829 RUFY2Q8WXA3 655 aa15.84■□□□□ 0.13
CPNE6-204ENST00000557829 GLRX3O76003 335 aaKnown RBP15.83■□□□□ 0.13
CPNE6-204ENST00000557829 PDIA4P13667 645 aaKnown RBP15.83■□□□□ 0.13
CPNE6-204ENST00000557829 RBM6P78332 1123 aaKnown RBP15.83■□□□□ 0.13
CPNE6-204ENST00000557829 MTX1Q13505 466 aa15.83■□□□□ 0.13
CPNE6-204ENST00000557829 FAM98CQ17RN3 349 aaKnown RBP15.83■□□□□ 0.13
CPNE6-204ENST00000557829 BEND3Q5T5X7 828 aa15.83■□□□□ 0.13
CPNE6-204ENST00000557829 KCNB2Q92953 911 aa15.83■□□□□ 0.13
CPNE6-204ENST00000557829 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.13
CPNE6-204ENST00000557829 IL25Q9H293 177 aa15.83■□□□□ 0.13
CPNE6-204ENST00000557829 PHAXQ9H814 394 aaKnown RBP15.83■□□□□ 0.13
CPNE6-204ENST00000557829 HDAC5Q9UQL6 1122 aa15.83■□□□□ 0.13
CPNE6-204ENST00000557829 TOGARAM1Q9Y4F4 1720 aa15.83■□□□□ 0.13
CPNE6-204ENST00000557829 SRGAP3O43295 1099 aa15.83■□□□□ 0.12
CPNE6-204ENST00000557829 DDB1Q16531 1140 aa15.83■□□□□ 0.12
CPNE6-204ENST00000557829 NOL8Q76FK4 1167 aaKnown RBP15.83■□□□□ 0.12
CPNE6-204ENST00000557829 DNAAF4Q8WXU2 420 aa15.83■□□□□ 0.12
CPNE6-204ENST00000557829 TM6SF1Q9BZW5 370 aa15.83■□□□□ 0.12
CPNE6-204ENST00000557829 LAMB4A4D0S4 1761 aa15.82■□□□□ 0.12
CPNE6-204ENST00000557829 GADD45BO75293 160 aaPredicted RBP15.82■□□□□ 0.12
CPNE6-204ENST00000557829 UBE2HP62256 183 aa15.82■□□□□ 0.12
CPNE6-204ENST00000557829 ZSCAN31Q96LW9 406 aaPredicted RBP15.82■□□□□ 0.12
CPNE6-204ENST00000557829 CHPF2Q9P2E5 772 aa15.82■□□□□ 0.12
CPNE6-204ENST00000557829 R3HCC1Q9Y3T6 440 aaKnown RBP15.82■□□□□ 0.12
CPNE6-204ENST00000557829 STX6O43752 255 aa15.81■□□□□ 0.12
CPNE6-204ENST00000557829 AK2P54819 239 aa15.81■□□□□ 0.12
CPNE6-204ENST00000557829 TTC5Q8N0Z6 440 aa15.81■□□□□ 0.12
CPNE6-204ENST00000557829 MARCH10Q8NA82 808 aaPredicted RBP15.81■□□□□ 0.12
CPNE6-204ENST00000557829 RNF214Q8ND24 703 aa15.81■□□□□ 0.12
CPNE6-204ENST00000557829 VPS53Q5VIR6 699 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 SASS6Q6UVJ0 657 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 SH2B1Q9NRF2 756 aaPredicted RBP15.8■□□□□ 0.12
CPNE6-204ENST00000557829 SMC3Q9UQE7 1217 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 PAPPAQ13219 1627 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 UBR2Q8IWV8 1755 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 DYNC1I1O14576 645 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 F13A1P00488 732 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 ANXA1P04083 346 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 RUFY3Q7L099 469 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 ERC1Q8IUD2 1116 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 PIGBQ92521 554 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 TMOD3Q9NYL9 352 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 BRWD3Q6RI45 1802 aa15.8■□□□□ 0.12
CPNE6-204ENST00000557829 ALDH1L1O75891 902 aa15.79■□□□□ 0.12
CPNE6-204ENST00000557829 PTMAP06454 111 aaKnown RBP15.79■□□□□ 0.12
CPNE6-204ENST00000557829 NBPF7P0C2Y1 421 aaPredicted RBP15.79■□□□□ 0.12
CPNE6-204ENST00000557829 SYT1P21579 422 aa15.79■□□□□ 0.12
CPNE6-204ENST00000557829 KIAA2012Q0VF49 1180 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms