RNA–Protein interactions for RNA: ENST00000557771.5

RPGRIP1-213, Transcript of RPGR interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGRIP1, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-213ENST00000557771 PACS2Q86VP3 889 aa13.33□□□□□ -0.28
RPGRIP1-213ENST00000557771 RUFY2Q8WXA3 655 aa13.33□□□□□ -0.28
RPGRIP1-213ENST00000557771 ZSCAN31Q96LW9 406 aaPredicted RBP13.33□□□□□ -0.28
RPGRIP1-213ENST00000557771 RHOXF2Q9BQY4 288 aa13.33□□□□□ -0.28
RPGRIP1-213ENST00000557771 H2AFXP16104 143 aaPredicted RBP13.33□□□□□ -0.28
RPGRIP1-213ENST00000557771 CCDC12Q8WUD4 166 aaPredicted RBP13.33□□□□□ -0.28
RPGRIP1-213ENST00000557771 YY1AP1Q9H869 796 aa13.33□□□□□ -0.28
RPGRIP1-213ENST00000557771 FOXR1Q6PIV2 292 aa13.33□□□□□ -0.28
RPGRIP1-213ENST00000557771 FSIP1Q8NA03 581 aa13.33□□□□□ -0.28
RPGRIP1-213ENST00000557771 CCDC9Q9Y3X0 531 aaKnown RBP13.33□□□□□ -0.28
RPGRIP1-213ENST00000557771 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
RPGRIP1-213ENST00000557771 ETF1P62495 437 aaKnown RBP13.32□□□□□ -0.28
RPGRIP1-213ENST00000557771 CCDC30Q5VVM6 783 aa13.32□□□□□ -0.28
RPGRIP1-213ENST00000557771 BRMS1Q9HCU9 246 aa13.32□□□□□ -0.28
RPGRIP1-213ENST00000557771 MUM1L1Q5H9M0 696 aa13.32□□□□□ -0.28
RPGRIP1-213ENST00000557771 WWC2Q6AWC2 1192 aa13.32□□□□□ -0.28
RPGRIP1-213ENST00000557771 NYAP1Q6ZVC0 841 aa13.32□□□□□ -0.28
RPGRIP1-213ENST00000557771 XPO4Q9C0E2 1151 aaKnown RBP13.32□□□□□ -0.28
RPGRIP1-213ENST00000557771 CD109Q6YHK3 1445 aa13.32□□□□□ -0.28
RPGRIP1-213ENST00000557771 CCP110O43303 1012 aa13.32□□□□□ -0.28
RPGRIP1-213ENST00000557771 HSPA4P34932 840 aa13.32□□□□□ -0.28
RPGRIP1-213ENST00000557771 MAGEA9P43362 315 aa13.32□□□□□ -0.28
RPGRIP1-213ENST00000557771 ERLIN1O75477 346 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 BLOC1S2Q6QNY1 142 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 SH2B1Q9NRF2 756 aaPredicted RBP13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 FAN1Q9Y2M0 1017 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 CEP83Q9Y592 693 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 ATP6V1AP38606 617 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 PPP2R5AQ15172 486 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 ME3Q16798 604 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 CCDC150Q8NCX0 1101 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 CXorf56Q9H5V9 222 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 CCDC172P0C7W6 258 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 CCZ1BP86790 482 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 CCZ1P86791 482 aaPredicted RBP13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 SIRT1Q96EB6 747 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 IL25Q9H293 177 aa13.31□□□□□ -0.28
RPGRIP1-213ENST00000557771 ADCK5Q3MIX3 580 aa13.3□□□□□ -0.28
RPGRIP1-213ENST00000557771 CC2D1AQ6P1N0 951 aaPredicted RBP13.3□□□□□ -0.28
RPGRIP1-213ENST00000557771 ZNF622Q969S3 477 aaKnown RBP eCLIP13.3□□□□□ -0.28
RPGRIP1-213ENST00000557771 MRFAP1L1Q96HT8 127 aa13.3□□□□□ -0.28
RPGRIP1-213ENST00000557771 ADGBQ8N7X0 1667 aa13.3□□□□□ -0.28
RPGRIP1-213ENST00000557771 ATP2B1P20020 1258 aa13.3□□□□□ -0.28
RPGRIP1-213ENST00000557771 LONRF2Q1L5Z9 754 aa13.3□□□□□ -0.28
RPGRIP1-213ENST00000557771 LRRFIP1Q32MZ4 808 aaKnown RBP13.3□□□□□ -0.28
RPGRIP1-213ENST00000557771 DNAJC21Q5F1R6 531 aaKnown RBP13.3□□□□□ -0.28
RPGRIP1-213ENST00000557771 PARD6BQ9BYG5 372 aa13.3□□□□□ -0.28
RPGRIP1-213ENST00000557771 ACBD3Q9H3P7 528 aa13.3□□□□□ -0.28
RPGRIP1-213ENST00000557771 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
RPGRIP1-213ENST00000557771 ELP1O95163 1332 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 ZNF518AQ6AHZ1 1483 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 UBTFL1P0CB47 393 aaPredicted RBP13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 EXOC4Q96A65 974 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 RAI14Q9P0K7 980 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 BCCIPQ9P287 314 aaKnown RBP eCLIP13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 CFAP45Q9UL16 551 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 EMILIN1Q9Y6C2 1016 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 SASH3O75995 380 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 AKAP17AQ02040 695 aaKnown RBP13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 E4F1Q66K89 784 aaPredicted RBP13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 GGT6Q6P531 493 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 STK11IPQ8N1F8 1099 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 AFAP1Q8N556 730 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 GOLGA1Q92805 767 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 BRF1Q92994 677 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 GDAP1L1Q96MZ0 367 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 PNMA6EA0A0J9YXQ4 647 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 TOP1P11387 765 aaKnown RBP13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 USP8P40818 1118 aa13.29□□□□□ -0.28
RPGRIP1-213ENST00000557771 ZSCAN12O43309 604 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 KIF4BQ2VIQ3 1234 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 SMARCC1Q92922 1105 aaPredicted RBP13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 LRRC2Q9BYS8 371 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 FTOQ9C0B1 505 aaKnown RBP eCLIP13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 BICC1Q9H694 974 aaKnown RBP13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 PTPRTO14522 1441 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 SRGAP3O43295 1099 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 CCDC158Q5M9N0 1113 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 G2E3Q7L622 706 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 NBPF11Q86T75 865 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 TSPYL4Q9UJ04 414 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 ERVK-7P63135 1459 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 EFCAB8A8MWE9 144 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 ECM2O94769 699 aaPredicted RBP13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 TBC1D8O95759 1140 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 MCTP2Q6DN12 878 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 SUFUQ9UMX1 484 aa13.28□□□□□ -0.28
RPGRIP1-213ENST00000557771 FYB1O15117 783 aa13.27□□□□□ -0.28
RPGRIP1-213ENST00000557771 ERLIN2O94905 339 aa13.27□□□□□ -0.28
RPGRIP1-213ENST00000557771 RRS1Q15050 365 aaKnown RBP13.27□□□□□ -0.28
RPGRIP1-213ENST00000557771 GBP6Q6ZN66 633 aa13.27□□□□□ -0.28
RPGRIP1-213ENST00000557771 LZTFL1Q9NQ48 299 aa13.27□□□□□ -0.28
RPGRIP1-213ENST00000557771 JAK2O60674 1132 aa13.27□□□□□ -0.29
RPGRIP1-213ENST00000557771 GNAI3P08754 354 aa13.27□□□□□ -0.29
RPGRIP1-213ENST00000557771 CNNM3Q8NE01 707 aa13.27□□□□□ -0.29
RPGRIP1-213ENST00000557771 RTL1A6NKG5 1358 aa13.27□□□□□ -0.29
RPGRIP1-213ENST00000557771 CAVIN2O95810 425 aa13.27□□□□□ -0.29
RPGRIP1-213ENST00000557771 STK38Q15208 465 aa13.27□□□□□ -0.29
RPGRIP1-213ENST00000557771 CPLX3Q8WVH0 158 aa13.27□□□□□ -0.29
RPGRIP1-213ENST00000557771 IFIT2P09913 472 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms