RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 CAMKK2Q96RR4 588 aa13.07□□□□□ -0.32
GABRB3-213ENST00000557765 PDZRN3Q9UPQ7 1066 aa13.07□□□□□ -0.32
GABRB3-213ENST00000557765 TNNQ9UQP3 1299 aa13.07□□□□□ -0.32
GABRB3-213ENST00000557765 SH3TC1Q8TE82 1336 aa13.07□□□□□ -0.32
GABRB3-213ENST00000557765 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
GABRB3-213ENST00000557765 NUP98P52948 1817 aa13.06□□□□□ -0.32
GABRB3-213ENST00000557765 NBPF7P0C2Y1 421 aaPredicted RBP13.06□□□□□ -0.32
GABRB3-213ENST00000557765 CASP7P55210 303 aa13.06□□□□□ -0.32
GABRB3-213ENST00000557765 POLA2Q14181 598 aa13.06□□□□□ -0.32
GABRB3-213ENST00000557765 CWF19L2Q2TBE0 894 aaKnown RBP13.06□□□□□ -0.32
GABRB3-213ENST00000557765 TPTE2Q6XPS3 522 aa13.06□□□□□ -0.32
GABRB3-213ENST00000557765 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
GABRB3-213ENST00000557765 SETDB2Q96T68 719 aa13.06□□□□□ -0.32
GABRB3-213ENST00000557765 UTP14AQ9BVJ6 771 aaKnown RBP13.06□□□□□ -0.32
GABRB3-213ENST00000557765 LRRC4BQ9NT99 713 aa13.06□□□□□ -0.32
GABRB3-213ENST00000557765 NOP58Q9Y2X3 529 aaKnown RBP13.06□□□□□ -0.32
GABRB3-213ENST00000557765 ZNF330Q9Y3S2 320 aaPredicted RBP13.06□□□□□ -0.32
GABRB3-213ENST00000557765 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
GABRB3-213ENST00000557765 UBR3Q6ZT12 1888 aa13.06□□□□□ -0.32
GABRB3-213ENST00000557765 AFDNP55196 1824 aaKnown RBP13.05□□□□□ -0.32
GABRB3-213ENST00000557765 SLC10A5Q5PT55 438 aa13.05□□□□□ -0.32
GABRB3-213ENST00000557765 PROM2Q8N271 834 aa13.05□□□□□ -0.32
GABRB3-213ENST00000557765 ARHGEF1Q92888 912 aaKnown RBP13.05□□□□□ -0.32
GABRB3-213ENST00000557765 STK32BQ9NY57 414 aa13.05□□□□□ -0.32
GABRB3-213ENST00000557765 TBC1D2BQ9UPU7 963 aa13.05□□□□□ -0.32
GABRB3-213ENST00000557765 LRRFIP2Q9Y608 721 aaKnown RBP13.05□□□□□ -0.32
GABRB3-213ENST00000557765 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.04□□□□□ -0.32
GABRB3-213ENST00000557765 PDE8AO60658 829 aa13.04□□□□□ -0.32
GABRB3-213ENST00000557765 PTF1AQ7RTS3 328 aa13.04□□□□□ -0.32
GABRB3-213ENST00000557765 TICAM2Q86XR7 235 aa13.04□□□□□ -0.32
GABRB3-213ENST00000557765 ARXQ96QS3 562 aa13.04□□□□□ -0.32
GABRB3-213ENST00000557765 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
GABRB3-213ENST00000557765 TFCP2L1Q9NZI6 479 aa13.04□□□□□ -0.32
GABRB3-213ENST00000557765 TRMT112Q9UI30 125 aaKnown RBP13.04□□□□□ -0.32
GABRB3-213ENST00000557765 NIP7Q9Y221 180 aaKnown RBP eCLIP13.04□□□□□ -0.32
GABRB3-213ENST00000557765 COL24A1Q17RW2 1714 aa13.03□□□□□ -0.32
GABRB3-213ENST00000557765 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
GABRB3-213ENST00000557765 CSF1RP07333 972 aa13.03□□□□□ -0.32
GABRB3-213ENST00000557765 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
GABRB3-213ENST00000557765 UBE3BQ7Z3V4 1068 aa13.03□□□□□ -0.32
GABRB3-213ENST00000557765 CIAO1O76071 339 aa13.02□□□□□ -0.33
GABRB3-213ENST00000557765 NUCB1Q02818 461 aa13.02□□□□□ -0.33
GABRB3-213ENST00000557765 SLC15A2Q16348 729 aa13.02□□□□□ -0.33
GABRB3-213ENST00000557765 HLFQ16534 295 aa13.02□□□□□ -0.33
GABRB3-213ENST00000557765 KIF1BPQ96EK5 621 aa13.02□□□□□ -0.33
GABRB3-213ENST00000557765 C4AP0C0L4 1744 aa13.02□□□□□ -0.33
GABRB3-213ENST00000557765 LAMB2P55268 1798 aa13.02□□□□□ -0.33
GABRB3-213ENST00000557765 ATP5J2-PTCD1G3V325 749 aa13.01□□□□□ -0.33
GABRB3-213ENST00000557765 PIP4K2AP48426 406 aaPredicted RBP13.01□□□□□ -0.33
GABRB3-213ENST00000557765 CCDC57Q2TAC2 916 aa13.01□□□□□ -0.33
GABRB3-213ENST00000557765 CCDC152Q4G0S7 254 aa13.01□□□□□ -0.33
GABRB3-213ENST00000557765 AOX1Q06278 1338 aa13□□□□□ -0.33
GABRB3-213ENST00000557765 IRS4O14654 1257 aaPredicted RBP13□□□□□ -0.33
GABRB3-213ENST00000557765 NTSR2O95665 410 aa13□□□□□ -0.33
GABRB3-213ENST00000557765 SF3B3Q15393 1217 aaKnown RBP13□□□□□ -0.33
GABRB3-213ENST00000557765 USPL1Q5W0Q7 1092 aa13□□□□□ -0.33
GABRB3-213ENST00000557765 TMC4Q7Z404 712 aa13□□□□□ -0.33
GABRB3-213ENST00000557765 SIRT2Q8IXJ6 389 aa13□□□□□ -0.33
GABRB3-213ENST00000557765 LRRCC1Q9C099 1032 aa13□□□□□ -0.33
GABRB3-213ENST00000557765 BICC1Q9H694 974 aaKnown RBP13□□□□□ -0.33
GABRB3-213ENST00000557765 GPR108Q9NPR9 543 aa13□□□□□ -0.33
GABRB3-213ENST00000557765 UBN2Q6ZU65 1347 aa12.99□□□□□ -0.33
GABRB3-213ENST00000557765 IGHDP01880 384 aa12.99□□□□□ -0.33
GABRB3-213ENST00000557765 GYS1P13807 737 aa12.99□□□□□ -0.33
GABRB3-213ENST00000557765 GTF2E1P29083 439 aaPredicted RBP12.99□□□□□ -0.33
GABRB3-213ENST00000557765 IL15P40933 162 aaPredicted RBP12.99□□□□□ -0.33
GABRB3-213ENST00000557765 CTSWP56202 376 aa12.99□□□□□ -0.33
GABRB3-213ENST00000557765 ST5P78524 1137 aa12.99□□□□□ -0.33
GABRB3-213ENST00000557765 FOXO4P98177 505 aa12.99□□□□□ -0.33
GABRB3-213ENST00000557765 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
GABRB3-213ENST00000557765 IFIT5Q13325 482 aaKnown RBP12.99□□□□□ -0.33
GABRB3-213ENST00000557765 CHD1LQ86WJ1 897 aa12.99□□□□□ -0.33
GABRB3-213ENST00000557765 NBPF5PQ86XG9 351 aaPredicted RBP12.99□□□□□ -0.33
GABRB3-213ENST00000557765 SUCLG2Q96I99 432 aa12.99□□□□□ -0.33
GABRB3-213ENST00000557765 NLRP3Q96P20 1036 aa12.99□□□□□ -0.33
GABRB3-213ENST00000557765 CDC5LQ99459 802 aaKnown RBP12.99□□□□□ -0.33
GABRB3-213ENST00000557765 TM4SF1P30408 202 aa12.98□□□□□ -0.33
GABRB3-213ENST00000557765 GPATCH3Q96I76 525 aa12.98□□□□□ -0.33
GABRB3-213ENST00000557765 KAZALD1Q96I82 304 aa12.98□□□□□ -0.33
GABRB3-213ENST00000557765 BCL2L12Q9HB09 334 aa12.98□□□□□ -0.33
GABRB3-213ENST00000557765 ANKRD18BA2A2Z9 1011 aa12.97□□□□□ -0.33
GABRB3-213ENST00000557765 ZBTB22O15209 634 aa12.97□□□□□ -0.33
GABRB3-213ENST00000557765 IGSF3O75054 1194 aa12.97□□□□□ -0.33
GABRB3-213ENST00000557765 SURF6O75683 361 aaKnown RBP12.97□□□□□ -0.33
GABRB3-213ENST00000557765 EN1Q05925 392 aaPredicted RBP12.97□□□□□ -0.33
GABRB3-213ENST00000557765 SUSD4Q5VX71 490 aa12.97□□□□□ -0.33
GABRB3-213ENST00000557765 LMBR1LQ6UX01 489 aa12.97□□□□□ -0.33
GABRB3-213ENST00000557765 CLASRPQ8N2M8 674 aaKnown RBP12.97□□□□□ -0.33
GABRB3-213ENST00000557765 CNBD1Q8NA66 436 aa12.97□□□□□ -0.33
GABRB3-213ENST00000557765 TTLL11Q8NHH1 800 aa12.97□□□□□ -0.33
GABRB3-213ENST00000557765 OSBPL3Q9H4L5 887 aa12.97□□□□□ -0.33
GABRB3-213ENST00000557765 AKAP2Q9Y2D5 859 aa12.97□□□□□ -0.33
GABRB3-213ENST00000557765 MYH3P11055 1940 aa12.97□□□□□ -0.33
GABRB3-213ENST00000557765 EP400Q96L91 3159 aa12.97□□□□□ -0.33
GABRB3-213ENST00000557765 PNMA6EA0A0J9YXQ4 647 aa12.96□□□□□ -0.33
GABRB3-213ENST00000557765 GPTP24298 496 aa12.96□□□□□ -0.33
GABRB3-213ENST00000557765 EZH2Q15910 746 aaKnown RBP12.96□□□□□ -0.33
GABRB3-213ENST00000557765 TBC1D9BQ66K14 1250 aa12.96□□□□□ -0.33
GABRB3-213ENST00000557765 FAM89AQ96GI7 184 aa12.96□□□□□ -0.33
GABRB3-213ENST00000557765 C1orf115Q9H7X2 142 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms