RNA–Protein interactions for RNA: ENST00000557519.1

RPS29-208, Transcript of ribosomal protein S29, human

TSL 3

Gene RPS29, Length 333 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS29-208	ENST00000557519	UBN2	Q6ZU65	1347 aa		12.5	□□□□□ -0.41
RPS29-208	ENST00000557519	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.5	□□□□□ -0.41
RPS29-208	ENST00000557519	SH3TC1	Q8TE82	1336 aa		12.49	□□□□□ -0.41
RPS29-208	ENST00000557519	NTSR2	O95665	410 aa		12.49	□□□□□ -0.41
RPS29-208	ENST00000557519	NEXN	Q0ZGT2	675 aa		12.49	□□□□□ -0.41
RPS29-208	ENST00000557519	ERFE	Q4G0M1	354 aa		12.49	□□□□□ -0.41
RPS29-208	ENST00000557519	GRIPAP1	Q4V328	841 aa		12.49	□□□□□ -0.41
RPS29-208	ENST00000557519	SUSD4	Q5VX71	490 aa		12.49	□□□□□ -0.41
RPS29-208	ENST00000557519	PRPF40B	Q6NWY9	871 aa	Known RBP	12.49	□□□□□ -0.41
RPS29-208	ENST00000557519	NUTM1	Q86Y26	1132 aa		12.49	□□□□□ -0.41
RPS29-208	ENST00000557519	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.49	□□□□□ -0.41
RPS29-208	ENST00000557519	ADCY9	O60503	1353 aa		12.48	□□□□□ -0.41
RPS29-208	ENST00000557519	SENP3-EIF4A1	A0A087X0R7	540 aa		12.48	□□□□□ -0.41
RPS29-208	ENST00000557519	LMNB1	P20700	586 aa		12.48	□□□□□ -0.41
RPS29-208	ENST00000557519	CCDC93	Q567U6	631 aa		12.48	□□□□□ -0.41
RPS29-208	ENST00000557519	NLRP10	Q86W26	655 aa		12.48	□□□□□ -0.41
RPS29-208	ENST00000557519	RNF181	Q9P0P0	153 aa		12.48	□□□□□ -0.41
RPS29-208	ENST00000557519	ABCC12	Q96J65	1359 aa		12.47	□□□□□ -0.41
RPS29-208	ENST00000557519		E9PSI1	815 aa		12.47	□□□□□ -0.41
RPS29-208	ENST00000557519	C21orf2	O43822	256 aa		12.47	□□□□□ -0.41
RPS29-208	ENST00000557519	CRY2	Q49AN0	593 aa		12.47	□□□□□ -0.41
RPS29-208	ENST00000557519	C9orf131	Q5VYM1	1079 aa		12.47	□□□□□ -0.41
RPS29-208	ENST00000557519	CC2D2B	Q6DHV5	1058 aa		12.47	□□□□□ -0.41
RPS29-208	ENST00000557519	RTKN2	Q8IZC4	609 aa		12.47	□□□□□ -0.41
RPS29-208	ENST00000557519	TAOK3	Q9H2K8	898 aa		12.47	□□□□□ -0.41
RPS29-208	ENST00000557519	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.47	□□□□□ -0.41
RPS29-208	ENST00000557519	KDM2B	Q8NHM5	1336 aa		12.46	□□□□□ -0.41
RPS29-208	ENST00000557519	LTBP3	Q9NS15	1303 aa		12.46	□□□□□ -0.41
RPS29-208	ENST00000557519	TRIM28	Q13263	835 aa	Known RBP	12.46	□□□□□ -0.41
RPS29-208	ENST00000557519	TSPYL6	Q8N831	410 aa		12.46	□□□□□ -0.41
RPS29-208	ENST00000557519	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.46	□□□□□ -0.41
RPS29-208	ENST00000557519	SBF1	O95248	1867 aa		12.46	□□□□□ -0.42
RPS29-208	ENST00000557519	FER1L6	Q2WGJ9	1857 aa		12.46	□□□□□ -0.42
RPS29-208	ENST00000557519	SLX4	Q8IY92	1834 aa		12.46	□□□□□ -0.42
RPS29-208	ENST00000557519	SLC4A2	P04920	1241 aa		12.45	□□□□□ -0.42
RPS29-208	ENST00000557519	HOXA10	P31260	410 aa	Predicted RBP	12.45	□□□□□ -0.42
RPS29-208	ENST00000557519	EXOSC9	Q06265	439 aa	Known RBP	12.45	□□□□□ -0.42
RPS29-208	ENST00000557519	SLC10A5	Q5PT55	438 aa		12.45	□□□□□ -0.42
RPS29-208	ENST00000557519	KSR2	Q6VAB6	950 aa		12.45	□□□□□ -0.42
RPS29-208	ENST00000557519	DDX46	Q7L014	1031 aa	Known RBP	12.45	□□□□□ -0.42
RPS29-208	ENST00000557519	CCDC191	Q8NCU4	936 aa		12.45	□□□□□ -0.42
RPS29-208	ENST00000557519	CRAMP1	Q96RY5	1269 aa		12.45	□□□□□ -0.42
RPS29-208	ENST00000557519	ISCA1	Q9BUE6	129 aa		12.45	□□□□□ -0.42
RPS29-208	ENST00000557519	PHAX	Q9H814	394 aa	Known RBP	12.45	□□□□□ -0.42
RPS29-208	ENST00000557519	LAMB2	P55268	1798 aa		12.44	□□□□□ -0.42
RPS29-208	ENST00000557519	RASSF7	Q02833	373 aa		12.44	□□□□□ -0.42
RPS29-208	ENST00000557519	TMC4	Q7Z404	712 aa		12.44	□□□□□ -0.42
RPS29-208	ENST00000557519	MYD88	Q99836	296 aa		12.44	□□□□□ -0.42
RPS29-208	ENST00000557519	METTL22	Q9BUU2	404 aa	Predicted RBP	12.44	□□□□□ -0.42
RPS29-208	ENST00000557519	CWC25	Q9NXE8	425 aa	Predicted RBP	12.44	□□□□□ -0.42
RPS29-208	ENST00000557519	TIAM2	Q8IVF5	1701 aa		12.44	□□□□□ -0.42
RPS29-208	ENST00000557519	CCDC88A	Q3V6T2	1871 aa		12.44	□□□□□ -0.42
RPS29-208	ENST00000557519	DICER1	Q9UPY3	1922 aa	Known RBP	12.43	□□□□□ -0.42
RPS29-208	ENST00000557519	ATP5J2-PTCD1	G3V325	749 aa		12.43	□□□□□ -0.42
RPS29-208	ENST00000557519	PPEF1	O14829	653 aa	Predicted RBP	12.43	□□□□□ -0.42
RPS29-208	ENST00000557519	FLII	Q13045	1269 aa		12.43	□□□□□ -0.42
RPS29-208	ENST00000557519	FKBP5	Q13451	457 aa	Predicted RBP	12.43	□□□□□ -0.42
RPS29-208	ENST00000557519	DPY19L2	Q6NUT2	758 aa		12.43	□□□□□ -0.42
RPS29-208	ENST00000557519	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.43	□□□□□ -0.42
RPS29-208	ENST00000557519	ZNF526	Q8TF50	670 aa	Predicted RBP	12.43	□□□□□ -0.42
RPS29-208	ENST00000557519	ZNF428	Q96B54	188 aa		12.43	□□□□□ -0.42
RPS29-208	ENST00000557519	MAP3K2	Q9Y2U5	619 aa		12.43	□□□□□ -0.42
RPS29-208	ENST00000557519	ZNF521	Q96K83	1311 aa		12.42	□□□□□ -0.42
RPS29-208	ENST00000557519	PI4KAP2	A4QPH2	592 aa		12.42	□□□□□ -0.42
RPS29-208	ENST00000557519	NFKBIE	O00221	500 aa		12.42	□□□□□ -0.42
RPS29-208	ENST00000557519	VAMP4	O75379	141 aa		12.42	□□□□□ -0.42
RPS29-208	ENST00000557519	BBOX1	O75936	387 aa		12.42	□□□□□ -0.42
RPS29-208	ENST00000557519	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.42	□□□□□ -0.42
RPS29-208	ENST00000557519	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.42	□□□□□ -0.42
RPS29-208	ENST00000557519	PI4KAP1	Q8N8J0	262 aa		12.42	□□□□□ -0.42
RPS29-208	ENST00000557519	IRS4	O14654	1257 aa	Predicted RBP	12.41	□□□□□ -0.42
RPS29-208	ENST00000557519	PCCA	P05165	728 aa	Predicted RBP	12.41	□□□□□ -0.42
RPS29-208	ENST00000557519	HCLS1	P14317	486 aa	Predicted RBP	12.41	□□□□□ -0.42
RPS29-208	ENST00000557519	DDX60	Q8IY21	1712 aa	Known RBP	12.41	□□□□□ -0.42
RPS29-208	ENST00000557519	SUPT20H	Q8NEM7	779 aa		12.41	□□□□□ -0.42
RPS29-208	ENST00000557519	FAM89A	Q96GI7	184 aa		12.41	□□□□□ -0.42
RPS29-208	ENST00000557519	PSMD1	Q99460	953 aa		12.41	□□□□□ -0.42
RPS29-208	ENST00000557519	ABCC4	O15439	1325 aa		12.4	□□□□□ -0.42
RPS29-208	ENST00000557519	TCERG1	O14776	1098 aa	Known RBP	12.4	□□□□□ -0.42
RPS29-208	ENST00000557519	CT47B1	P0C2W7	299 aa	Predicted RBP	12.4	□□□□□ -0.42
RPS29-208	ENST00000557519	GRAP	Q13588	217 aa		12.4	□□□□□ -0.42
RPS29-208	ENST00000557519	CCDC152	Q4G0S7	254 aa		12.4	□□□□□ -0.42
RPS29-208	ENST00000557519	GRAPL	Q8TC17	118 aa	Predicted RBP	12.4	□□□□□ -0.42
RPS29-208	ENST00000557519	C7orf43	Q8WVR3	580 aa		12.4	□□□□□ -0.42
RPS29-208	ENST00000557519	DNAAF4	Q8WXU2	420 aa		12.4	□□□□□ -0.42
RPS29-208	ENST00000557519	JDP2	Q8WYK2	163 aa		12.4	□□□□□ -0.42
RPS29-208	ENST00000557519	MYH3	P11055	1940 aa		12.39	□□□□□ -0.43
RPS29-208	ENST00000557519	PDE8A	O60658	829 aa		12.39	□□□□□ -0.43
RPS29-208	ENST00000557519	SF3B3	Q15393	1217 aa	Known RBP	12.39	□□□□□ -0.43
RPS29-208	ENST00000557519	VPS33B	Q9H267	617 aa		12.39	□□□□□ -0.43
RPS29-208	ENST00000557519	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.39	□□□□□ -0.43
RPS29-208	ENST00000557519	ATP6V0A2	Q9Y487	856 aa		12.39	□□□□□ -0.43
RPS29-208	ENST00000557519	CDHR2	Q9BYE9	1310 aa		12.38	□□□□□ -0.43
RPS29-208	ENST00000557519	GLTPD2	A6NH11	291 aa		12.38	□□□□□ -0.43
RPS29-208	ENST00000557519	SLFN5	Q08AF3	891 aa		12.38	□□□□□ -0.43
RPS29-208	ENST00000557519	RTL5	Q5HYW3	569 aa	Predicted RBP	12.38	□□□□□ -0.43
RPS29-208	ENST00000557519	LINS1	Q8NG48	757 aa		12.38	□□□□□ -0.43
RPS29-208	ENST00000557519	NEURL1B	A8MQ27	555 aa		12.37	□□□□□ -0.43
RPS29-208	ENST00000557519	IARS	P41252	1262 aa	Known RBP	12.37	□□□□□ -0.43
RPS29-208	ENST00000557519	DPP8	Q6V1X1	898 aa	Predicted RBP	12.37	□□□□□ -0.43

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