RNA–Protein interactions for RNA: ENST00000557437.1

SEC23A-214, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-214ENST00000557437 TIAM2Q8IVF5 1701 aa19.47■□□□□ 0.71
SEC23A-214ENST00000557437 TOMM70O94826 608 aa19.46■□□□□ 0.71
SEC23A-214ENST00000557437 TCIRG1Q13488 830 aa19.46■□□□□ 0.71
SEC23A-214ENST00000557437 SLC10A5Q5PT55 438 aa19.46■□□□□ 0.71
SEC23A-214ENST00000557437 TAOK3Q9H2K8 898 aa19.46■□□□□ 0.71
SEC23A-214ENST00000557437 MRS2Q9HD23 443 aa19.46■□□□□ 0.71
SEC23A-214ENST00000557437 DICER1Q9UPY3 1922 aaKnown RBP19.46■□□□□ 0.71
SEC23A-214ENST00000557437 RNF123Q5XPI4 1314 aa19.46■□□□□ 0.71
SEC23A-214ENST00000557437 SNED1Q8TER0 1413 aa19.45■□□□□ 0.7
SEC23A-214ENST00000557437 CCDC93Q567U6 631 aa19.45■□□□□ 0.7
SEC23A-214ENST00000557437 NLRP10Q86W26 655 aa19.45■□□□□ 0.7
SEC23A-214ENST00000557437 GLTPD2A6NH11 291 aa19.44■□□□□ 0.7
SEC23A-214ENST00000557437 WWC1Q8IX03 1113 aa19.44■□□□□ 0.7
SEC23A-214ENST00000557437 PLBD2Q8NHP8 589 aa19.44■□□□□ 0.7
SEC23A-214ENST00000557437 UTP14AQ9BVJ6 771 aaKnown RBP19.44■□□□□ 0.7
SEC23A-214ENST00000557437 HYPKQ9NX55 129 aa19.44■□□□□ 0.7
SEC23A-214ENST00000557437 CEP350Q5VT06 3117 aa19.43■□□□□ 0.7
SEC23A-214ENST00000557437 ANKRD13DQ6ZTN6 518 aa19.43■□□□□ 0.7
SEC23A-214ENST00000557437 C3orf67Q6ZVT6 689 aa19.43■□□□□ 0.7
SEC23A-214ENST00000557437 C8orf58Q8NAV2 365 aa19.43■□□□□ 0.7
SEC23A-214ENST00000557437 OLFM4Q6UX06 510 aa19.42■□□□□ 0.7
SEC23A-214ENST00000557437 CRAMP1Q96RY5 1269 aa19.42■□□□□ 0.7
SEC23A-214ENST00000557437 RRAGCQ9HB90 399 aa19.42■□□□□ 0.7
SEC23A-214ENST00000557437 HSPA6P17066 643 aa19.41■□□□□ 0.7
SEC23A-214ENST00000557437 FKBP4Q02790 459 aaKnown RBP eCLIP19.41■□□□□ 0.7
SEC23A-214ENST00000557437 RTKN2Q8IZC4 609 aa19.41■□□□□ 0.7
SEC23A-214ENST00000557437 RPGRQ92834 1020 aaKnown RBP19.41■□□□□ 0.7
SEC23A-214ENST00000557437 NLRP3Q96P20 1036 aa19.41■□□□□ 0.7
SEC23A-214ENST00000557437 ISCA1Q9BUE6 129 aa19.41■□□□□ 0.7
SEC23A-214ENST00000557437 ELL2O00472 640 aaPredicted RBP19.4■□□□□ 0.7
SEC23A-214ENST00000557437 RBM46Q8TBY0 533 aaKnown RBP19.4■□□□□ 0.7
SEC23A-214ENST00000557437 IL16Q14005 1332 aa19.4■□□□□ 0.7
SEC23A-214ENST00000557437 TRIM28Q13263 835 aaKnown RBP19.39■□□□□ 0.69
SEC23A-214ENST00000557437 CC2D2BQ6DHV5 1058 aa19.39■□□□□ 0.69
SEC23A-214ENST00000557437 SYNE4Q8N205 404 aa19.39■□□□□ 0.69
SEC23A-214ENST00000557437 RBM17Q96I25 401 aaKnown RBP19.39■□□□□ 0.69
SEC23A-214ENST00000557437 WDR90Q96KV7 1748 aa19.39■□□□□ 0.69
SEC23A-214ENST00000557437 POTECB2RU33 542 aa19.38■□□□□ 0.69
SEC23A-214ENST00000557437 DPY19L2Q6NUT2 758 aa19.38■□□□□ 0.69
SEC23A-214ENST00000557437 TSPYL6Q8N831 410 aa19.38■□□□□ 0.69
SEC23A-214ENST00000557437 SH3TC1Q8TE82 1336 aa19.38■□□□□ 0.69
SEC23A-214ENST00000557437 TSR2Q969E8 191 aaKnown RBP19.38■□□□□ 0.69
SEC23A-214ENST00000557437 PSMD1Q99460 953 aa19.38■□□□□ 0.69
SEC23A-214ENST00000557437 CHMP4AQ9BY43 222 aa19.38■□□□□ 0.69
SEC23A-214ENST00000557437 PHAXQ9H814 394 aaKnown RBP19.38■□□□□ 0.69
SEC23A-214ENST00000557437 TRMT112Q9UI30 125 aaKnown RBP19.38■□□□□ 0.69
SEC23A-214ENST00000557437 VEGFAP15692 232 aaPredicted RBP19.37■□□□□ 0.69
SEC23A-214ENST00000557437 GRIPAP1Q4V328 841 aa19.37■□□□□ 0.69
SEC23A-214ENST00000557437 LAMB2P55268 1798 aa19.37■□□□□ 0.69
SEC23A-214ENST00000557437 HCLS1P14317 486 aaPredicted RBP19.36■□□□□ 0.69
SEC23A-214ENST00000557437 CCDC30Q5VVM6 783 aa19.36■□□□□ 0.69
SEC23A-214ENST00000557437 C16orf71Q8IYS4 520 aaPredicted RBP19.36■□□□□ 0.69
SEC23A-214ENST00000557437 ZNF277Q9NRM2 450 aaPredicted RBP19.36■□□□□ 0.69
SEC23A-214ENST00000557437 ATP5J2-PTCD1G3V325 749 aa19.35■□□□□ 0.69
SEC23A-214ENST00000557437 PPEF1O14829 653 aaPredicted RBP19.35■□□□□ 0.69
SEC23A-214ENST00000557437 FSTL1Q12841 308 aa19.35■□□□□ 0.69
SEC23A-214ENST00000557437 DDX60Q8IY21 1712 aaKnown RBP19.34■□□□□ 0.69
SEC23A-214ENST00000557437 ABCC4O15439 1325 aa19.34■□□□□ 0.69
SEC23A-214ENST00000557437 IARSP41252 1262 aaKnown RBP19.34■□□□□ 0.69
SEC23A-214ENST00000557437 GOLGA2Q08379 1002 aa19.34■□□□□ 0.69
SEC23A-214ENST00000557437 SLC51AQ86UW1 340 aa19.34■□□□□ 0.69
SEC23A-214ENST00000557437 WDR63Q8IWG1 891 aa19.34■□□□□ 0.69
SEC23A-214ENST00000557437 RIC3Q7Z5B4 369 aa19.33■□□□□ 0.68
SEC23A-214ENST00000557437 ATP6V0A2Q9Y487 856 aa19.33■□□□□ 0.68
SEC23A-214ENST00000557437 BBOX1O75936 387 aa19.32■□□□□ 0.68
SEC23A-214ENST00000557437 DDNO94850 711 aaPredicted RBP19.32■□□□□ 0.68
SEC23A-214ENST00000557437 FAM89AQ96GI7 184 aa19.32■□□□□ 0.68
SEC23A-214ENST00000557437 COL4A5P29400 1685 aa19.31■□□□□ 0.68
SEC23A-214ENST00000557437 FZD9O00144 591 aa19.31■□□□□ 0.68
SEC23A-214ENST00000557437 SF3B3Q15393 1217 aaKnown RBP19.31■□□□□ 0.68
SEC23A-214ENST00000557437 TWISTNBQ3B726 338 aaPredicted RBP19.31■□□□□ 0.68
SEC23A-214ENST00000557437 L3MBTL3Q96JM7 780 aaPredicted RBP19.31■□□□□ 0.68
SEC23A-214ENST00000557437 FANCIQ9NVI1 1328 aa19.3■□□□□ 0.68
SEC23A-214ENST00000557437 APLP1P51693 650 aa19.3■□□□□ 0.68
SEC23A-214ENST00000557437 SP8Q8IXZ3 490 aa19.3■□□□□ 0.68
SEC23A-214ENST00000557437 SMC1BQ8NDV3 1235 aa19.3■□□□□ 0.68
SEC23A-214ENST00000557437 ZNF428Q96B54 188 aa19.3■□□□□ 0.68
SEC23A-214ENST00000557437 METTL22Q9BUU2 404 aaPredicted RBP19.3■□□□□ 0.68
SEC23A-214ENST00000557437 ZNF541Q9H0D2 1346 aa19.29■□□□□ 0.68
SEC23A-214ENST00000557437 DDX58O95786 925 aaKnown RBP19.29■□□□□ 0.68
SEC23A-214ENST00000557437 GRAPQ13588 217 aa19.29■□□□□ 0.68
SEC23A-214ENST00000557437 DDX46Q7L014 1031 aaKnown RBP19.29■□□□□ 0.68
SEC23A-214ENST00000557437 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
SEC23A-214ENST00000557437 ZBTB38Q8NAP3 1195 aaPredicted RBP19.29■□□□□ 0.68
SEC23A-214ENST00000557437 CCDC191Q8NCU4 936 aa19.29■□□□□ 0.68
SEC23A-214ENST00000557437 GRAPLQ8TC17 118 aaPredicted RBP19.29■□□□□ 0.68
SEC23A-214ENST00000557437 MYD88Q99836 296 aa19.29■□□□□ 0.68
SEC23A-214ENST00000557437 RTFDC1Q9BY42 306 aaPredicted RBP19.29■□□□□ 0.68
SEC23A-214ENST00000557437 TCERG1O14776 1098 aaKnown RBP19.28■□□□□ 0.68
SEC23A-214ENST00000557437 KSR2Q6VAB6 950 aa19.28■□□□□ 0.68
SEC23A-214ENST00000557437 VPS33BQ9H267 617 aa19.28■□□□□ 0.68
SEC23A-214ENST00000557437 SALL2Q9Y467 1007 aaPredicted RBP19.28■□□□□ 0.68
SEC23A-214ENST00000557437 IRS4O14654 1257 aaPredicted RBP19.27■□□□□ 0.68
SEC23A-214ENST00000557437 TMC4Q7Z404 712 aa19.27■□□□□ 0.68
SEC23A-214ENST00000557437 STK31Q9BXU1 1019 aa19.27■□□□□ 0.68
SEC23A-214ENST00000557437 SPINK5Q9NQ38 1064 aaPredicted RBP19.27■□□□□ 0.68
SEC23A-214ENST00000557437 MAP3K2Q9Y2U5 619 aa19.27■□□□□ 0.68
SEC23A-214ENST00000557437 SCN4AP35499 1836 aa19.27■□□□□ 0.68
SEC23A-214ENST00000557437 LRRC37AA6NMS7 1700 aa19.26■□□□□ 0.67
SEC23A-214ENST00000557437 PI4KAP2A4QPH2 592 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms