RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 CYP4F22Q6NT55 531 aa16.33■□□□□ 0.2
RTN1-208ENST00000557422 PAXIP1Q6ZW49 1069 aaPredicted RBP16.33■□□□□ 0.2
RTN1-208ENST00000557422 BEGAINQ9BUH8 593 aa16.33■□□□□ 0.2
RTN1-208ENST00000557422 RSPH6AQ9H0K4 717 aa16.33■□□□□ 0.2
RTN1-208ENST00000557422 THSD7BQ9C0I4 1608 aa16.33■□□□□ 0.2
RTN1-208ENST00000557422 GRM1Q13255 1194 aa16.32■□□□□ 0.2
RTN1-208ENST00000557422 CNGB1Q14028 1251 aaPredicted RBP16.32■□□□□ 0.2
RTN1-208ENST00000557422 MCM10Q7L590 875 aa16.32■□□□□ 0.2
RTN1-208ENST00000557422 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
RTN1-208ENST00000557422 NPC1L1Q9UHC9 1359 aa16.31■□□□□ 0.2
RTN1-208ENST00000557422 TRAF5O00463 557 aa16.31■□□□□ 0.2
RTN1-208ENST00000557422 USP50Q70EL3 339 aaPredicted RBP16.31■□□□□ 0.2
RTN1-208ENST00000557422 NUTM1Q86Y26 1132 aa16.31■□□□□ 0.2
RTN1-208ENST00000557422 HOXA10P31260 410 aaPredicted RBP16.3■□□□□ 0.2
RTN1-208ENST00000557422 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
RTN1-208ENST00000557422 RTF1Q92541 710 aaKnown RBP16.3■□□□□ 0.2
RTN1-208ENST00000557422 NYXQ9GZU5 481 aa16.3■□□□□ 0.2
RTN1-208ENST00000557422 TLL2Q9Y6L7 1015 aa16.3■□□□□ 0.2
RTN1-208ENST00000557422 TRPM7Q96QT4 1865 aa16.3■□□□□ 0.2
RTN1-208ENST00000557422 MAP2K2P36507 400 aa16.29■□□□□ 0.2
RTN1-208ENST00000557422 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
RTN1-208ENST00000557422 RPGRQ92834 1020 aaKnown RBP16.29■□□□□ 0.2
RTN1-208ENST00000557422 TSKSQ9UJT2 592 aa16.29■□□□□ 0.2
RTN1-208ENST00000557422 AOC2O75106 756 aa16.28■□□□□ 0.2
RTN1-208ENST00000557422 DCTN1Q14203 1278 aa16.28■□□□□ 0.2
RTN1-208ENST00000557422 SLC51AQ86UW1 340 aa16.28■□□□□ 0.2
RTN1-208ENST00000557422 ERVV-1B6SEH8 477 aa16.27■□□□□ 0.2
RTN1-208ENST00000557422 NGEFQ8N5V2 710 aa16.27■□□□□ 0.2
RTN1-208ENST00000557422 CRAMP1Q96RY5 1269 aa16.27■□□□□ 0.2
RTN1-208ENST00000557422 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
RTN1-208ENST00000557422 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
RTN1-208ENST00000557422 TAF7Q15545 349 aaPredicted RBP16.26■□□□□ 0.19
RTN1-208ENST00000557422 NIM1KQ8IY84 436 aa16.26■□□□□ 0.19
RTN1-208ENST00000557422 CFAP53Q96M91 514 aa16.26■□□□□ 0.19
RTN1-208ENST00000557422 GPRC5DQ9NZD1 345 aa16.26■□□□□ 0.19
RTN1-208ENST00000557422 MAP3K15Q6ZN16 1313 aa16.25■□□□□ 0.19
RTN1-208ENST00000557422 NUP98P52948 1817 aa16.25■□□□□ 0.19
RTN1-208ENST00000557422 PPEF1O14829 653 aaPredicted RBP16.25■□□□□ 0.19
RTN1-208ENST00000557422 TTLL7Q6ZT98 887 aa16.25■□□□□ 0.19
RTN1-208ENST00000557422 SAPCD2Q86UD0 394 aa16.25■□□□□ 0.19
RTN1-208ENST00000557422 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
RTN1-208ENST00000557422 MCOLN1Q9GZU1 580 aa16.25■□□□□ 0.19
RTN1-208ENST00000557422 ADARB2Q9NS39 739 aaKnown RBP16.25■□□□□ 0.19
RTN1-208ENST00000557422 MIS18AQ9NYP9 233 aa16.25■□□□□ 0.19
RTN1-208ENST00000557422 RIC1Q4ADV7 1423 aa16.25■□□□□ 0.19
RTN1-208ENST00000557422 PPIP5K2O43314 1243 aa16.24■□□□□ 0.19
RTN1-208ENST00000557422 CA12O43570 354 aa16.24■□□□□ 0.19
RTN1-208ENST00000557422 CELF2O95319 508 aaKnown RBP16.24■□□□□ 0.19
RTN1-208ENST00000557422 U2AF1L5P0DN76 240 aaPredicted RBP16.24■□□□□ 0.19
RTN1-208ENST00000557422 GPTP24298 496 aa16.24■□□□□ 0.19
RTN1-208ENST00000557422 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.19
RTN1-208ENST00000557422 SUSD4Q5VX71 490 aa16.24■□□□□ 0.19
RTN1-208ENST00000557422 NUDCQ9Y266 331 aa16.24■□□□□ 0.19
RTN1-208ENST00000557422 IBTKQ9P2D0 1353 aaPredicted RBP16.24■□□□□ 0.19
RTN1-208ENST00000557422 CASP8AP2Q9UKL3 1982 aa16.24■□□□□ 0.19
RTN1-208ENST00000557422 UBN2Q6ZU65 1347 aa16.23■□□□□ 0.19
RTN1-208ENST00000557422 CXCL9Q07325 125 aa16.23■□□□□ 0.19
RTN1-208ENST00000557422 AOC3Q16853 763 aa16.23■□□□□ 0.19
RTN1-208ENST00000557422 C3orf67Q6ZVT6 689 aa16.23■□□□□ 0.19
RTN1-208ENST00000557422 HHIPL1Q96JK4 782 aa16.23■□□□□ 0.19
RTN1-208ENST00000557422 PCDH10Q9P2E7 1040 aa16.23■□□□□ 0.19
RTN1-208ENST00000557422 RRP7AQ9Y3A4 280 aaKnown RBP16.23■□□□□ 0.19
RTN1-208ENST00000557422 BRPF1P55201 1214 aaPredicted RBP16.22■□□□□ 0.19
RTN1-208ENST00000557422 KIF6Q6ZMV9 814 aa16.22■□□□□ 0.19
RTN1-208ENST00000557422 ZNF34Q8IZ26 560 aa16.22■□□□□ 0.19
RTN1-208ENST00000557422 CFAP44Q96MT7 982 aa16.22■□□□□ 0.19
RTN1-208ENST00000557422 GLIS2Q9BZE0 524 aaPredicted RBP16.22■□□□□ 0.19
RTN1-208ENST00000557422 VPS33BQ9H267 617 aa16.22■□□□□ 0.19
RTN1-208ENST00000557422 PGAP2Q9UHJ9 254 aa16.22■□□□□ 0.19
RTN1-208ENST00000557422 LAMB4A4D0S4 1761 aa16.21■□□□□ 0.19
RTN1-208ENST00000557422 NTSR2O95665 410 aa16.21■□□□□ 0.19
RTN1-208ENST00000557422 GMPSP49915 693 aaPredicted RBP16.21■□□□□ 0.19
RTN1-208ENST00000557422 ZBTB3Q9H5J0 574 aa16.21■□□□□ 0.19
RTN1-208ENST00000557422 ZNRF3Q9ULT6 936 aa16.21■□□□□ 0.19
RTN1-208ENST00000557422 ATP6V0A2Q9Y487 856 aa16.21■□□□□ 0.19
RTN1-208ENST00000557422 MYL6BP14649 208 aa16.2■□□□□ 0.18
RTN1-208ENST00000557422 TMX4Q9H1E5 349 aaPredicted RBP16.2■□□□□ 0.18
RTN1-208ENST00000557422 HIRAP54198 1017 aaPredicted RBP16.19■□□□□ 0.18
RTN1-208ENST00000557422 DGKZQ13574 1117 aa16.19■□□□□ 0.18
RTN1-208ENST00000557422 CIAPIN1Q6FI81 312 aa16.19■□□□□ 0.18
RTN1-208ENST00000557422 ZC3H15Q8WU90 426 aaKnown RBP16.19■□□□□ 0.18
RTN1-208ENST00000557422 RTFDC1Q9BY42 306 aaPredicted RBP16.19■□□□□ 0.18
RTN1-208ENST00000557422 EIF4A1P60842 406 aaKnown RBP16.18■□□□□ 0.18
RTN1-208ENST00000557422 SLC10A5Q5PT55 438 aa16.18■□□□□ 0.18
RTN1-208ENST00000557422 GIGYF2Q6Y7W6 1299 aaKnown RBP16.18■□□□□ 0.18
RTN1-208ENST00000557422 PPP1R42Q7Z4L9 355 aa16.18■□□□□ 0.18
RTN1-208ENST00000557422 SUPT20HQ8NEM7 779 aa16.18■□□□□ 0.18
RTN1-208ENST00000557422 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
RTN1-208ENST00000557422 NLRP3Q96P20 1036 aa16.18■□□□□ 0.18
RTN1-208ENST00000557422 ZNF408Q9H9D4 720 aa16.18■□□□□ 0.18
RTN1-208ENST00000557422 PDE4DIPQ5VU43 2346 aa16.17■□□□□ 0.18
RTN1-208ENST00000557422 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
RTN1-208ENST00000557422 ZIC5Q96T25 663 aa16.17■□□□□ 0.18
RTN1-208ENST00000557422 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
RTN1-208ENST00000557422 KDM3BQ7LBC6 1761 aa16.16■□□□□ 0.18
RTN1-208ENST00000557422 PPP2R1AP30153 589 aa16.16■□□□□ 0.18
RTN1-208ENST00000557422 NOGQ13253 232 aa16.16■□□□□ 0.18
RTN1-208ENST00000557422 PARP10Q53GL7 1025 aa16.16■□□□□ 0.18
RTN1-208ENST00000557422 CDC37L1Q7L3B6 337 aa16.16■□□□□ 0.18
RTN1-208ENST00000557422 TRPM4Q8TD43 1214 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms