RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 YTHDC1Q96MU7 727 aaKnown RBP27.23■■□□□ 1.95
FOXA1-205ENST00000557418 IBTKQ9P2D0 1353 aaPredicted RBP27.22■■□□□ 1.95
FOXA1-205ENST00000557418 ELL2O00472 640 aaPredicted RBP27.22■■□□□ 1.95
FOXA1-205ENST00000557418 C7orf43Q8WVR3 580 aa27.22■■□□□ 1.95
FOXA1-205ENST00000557418 UTP14AQ9BVJ6 771 aaKnown RBP27.22■■□□□ 1.95
FOXA1-205ENST00000557418 TAOK3Q9H2K8 898 aa27.22■■□□□ 1.95
FOXA1-205ENST00000557418 NTSR2O95665 410 aa27.21■■□□□ 1.95
FOXA1-205ENST00000557418 TCIRG1Q13488 830 aa27.21■■□□□ 1.95
FOXA1-205ENST00000557418 SPINK5Q9NQ38 1064 aaPredicted RBP27.21■■□□□ 1.95
FOXA1-205ENST00000557418 HYPKQ9NX55 129 aa27.21■■□□□ 1.95
FOXA1-205ENST00000557418 FER1L6Q2WGJ9 1857 aa27.21■■□□□ 1.95
FOXA1-205ENST00000557418 ABCC12Q96J65 1359 aa27.21■■□□□ 1.95
FOXA1-205ENST00000557418 CRY2Q49AN0 593 aa27.2■■□□□ 1.94
FOXA1-205ENST00000557418 ANKRD13DQ6ZTN6 518 aa27.2■■□□□ 1.94
FOXA1-205ENST00000557418 RPGRQ92834 1020 aaKnown RBP27.2■■□□□ 1.94
FOXA1-205ENST00000557418 LTBP3Q9NS15 1303 aa27.19■■□□□ 1.94
FOXA1-205ENST00000557418 CCDC93Q567U6 631 aa27.19■■□□□ 1.94
FOXA1-205ENST00000557418 RRAGCQ9HB90 399 aa27.19■■□□□ 1.94
FOXA1-205ENST00000557418 ARFGEF2Q9Y6D5 1785 aa27.19■■□□□ 1.94
FOXA1-205ENST00000557418 TOMM70O94826 608 aa27.18■■□□□ 1.94
FOXA1-205ENST00000557418 GOLGA2Q08379 1002 aa27.18■■□□□ 1.94
FOXA1-205ENST00000557418 C16orf71Q8IYS4 520 aaPredicted RBP27.18■■□□□ 1.94
FOXA1-205ENST00000557418 PLBD2Q8NHP8 589 aa27.18■■□□□ 1.94
FOXA1-205ENST00000557418 NLRP3Q96P20 1036 aa27.18■■□□□ 1.94
FOXA1-205ENST00000557418 GLTPD2A6NH11 291 aa27.17■■□□□ 1.94
FOXA1-205ENST00000557418 SLC10A5Q5PT55 438 aa27.17■■□□□ 1.94
FOXA1-205ENST00000557418 NLRP10Q86W26 655 aa27.17■■□□□ 1.94
FOXA1-205ENST00000557418 CHMP4AQ9BY43 222 aa27.17■■□□□ 1.94
FOXA1-205ENST00000557418 HOXA10P31260 410 aaPredicted RBP27.16■■□□□ 1.94
FOXA1-205ENST00000557418 DPY19L2Q6NUT2 758 aa27.16■■□□□ 1.94
FOXA1-205ENST00000557418 RTKN2Q8IZC4 609 aa27.16■■□□□ 1.94
FOXA1-205ENST00000557418 C8orf58Q8NAV2 365 aa27.16■■□□□ 1.94
FOXA1-205ENST00000557418 CDCA7LQ96GN5 454 aa27.16■■□□□ 1.94
FOXA1-205ENST00000557418 RBM17Q96I25 401 aaKnown RBP27.16■■□□□ 1.94
FOXA1-205ENST00000557418 SLFN5Q08AF3 891 aa27.15■■□□□ 1.94
FOXA1-205ENST00000557418 TRMT112Q9UI30 125 aaKnown RBP27.15■■□□□ 1.94
FOXA1-205ENST00000557418 RIC1Q4ADV7 1423 aa27.15■■□□□ 1.94
FOXA1-205ENST00000557418 TRMT2AQ8IZ69 625 aaKnown RBP27.14■■□□□ 1.94
FOXA1-205ENST00000557418 DICER1Q9UPY3 1922 aaKnown RBP27.14■■□□□ 1.93
FOXA1-205ENST00000557418 RNF123Q5XPI4 1314 aa27.14■■□□□ 1.93
FOXA1-205ENST00000557418 FKBP4Q02790 459 aaKnown RBP eCLIP27.13■■□□□ 1.93
FOXA1-205ENST00000557418 OLFM4Q6UX06 510 aa27.13■■□□□ 1.93
FOXA1-205ENST00000557418 CRAMP1Q96RY5 1269 aa27.13■■□□□ 1.93
FOXA1-205ENST00000557418 TNRC6CQ9HCJ0 1690 aaKnown RBP27.13■■□□□ 1.93
FOXA1-205ENST00000557418 E9PSI1 815 aa27.12■■□□□ 1.93
FOXA1-205ENST00000557418 CCDC30Q5VVM6 783 aa27.12■■□□□ 1.93
FOXA1-205ENST00000557418 CC2D2BQ6DHV5 1058 aa27.12■■□□□ 1.93
FOXA1-205ENST00000557418 C3orf67Q6ZVT6 689 aa27.11■■□□□ 1.93
FOXA1-205ENST00000557418 TSR2Q969E8 191 aaKnown RBP27.11■■□□□ 1.93
FOXA1-205ENST00000557418 ANKRD36CQ5JPF3 1778 aa27.11■■□□□ 1.93
FOXA1-205ENST00000557418 FANCIQ9NVI1 1328 aa27.11■■□□□ 1.93
FOXA1-205ENST00000557418 VEGFAP15692 232 aaPredicted RBP27.1■■□□□ 1.93
FOXA1-205ENST00000557418 HSPA6P17066 643 aa27.1■■□□□ 1.93
FOXA1-205ENST00000557418 RIC3Q7Z5B4 369 aa27.1■■□□□ 1.93
FOXA1-205ENST00000557418 PHAXQ9H814 394 aaKnown RBP27.1■■□□□ 1.93
FOXA1-205ENST00000557418 SH3TC1Q8TE82 1336 aa27.1■■□□□ 1.93
FOXA1-205ENST00000557418 ATP5J2-PTCD1G3V325 749 aa27.09■■□□□ 1.93
FOXA1-205ENST00000557418 HCLS1P14317 486 aaPredicted RBP27.09■■□□□ 1.93
FOXA1-205ENST00000557418 SYNE4Q8N205 404 aa27.09■■□□□ 1.93
FOXA1-205ENST00000557418 TSPYL6Q8N831 410 aa27.09■■□□□ 1.93
FOXA1-205ENST00000557418 RBM46Q8TBY0 533 aaKnown RBP27.09■■□□□ 1.93
FOXA1-205ENST00000557418 ISCA1Q9BUE6 129 aa27.09■■□□□ 1.93
FOXA1-205ENST00000557418 ZNF277Q9NRM2 450 aaPredicted RBP27.09■■□□□ 1.93
FOXA1-205ENST00000557418 TIAM2Q8IVF5 1701 aa27.08■■□□□ 1.93
FOXA1-205ENST00000557418 TCERG1O14776 1098 aaKnown RBP27.08■■□□□ 1.93
FOXA1-205ENST00000557418 ZNF428Q96B54 188 aa27.08■■□□□ 1.93
FOXA1-205ENST00000557418 MYH16Q9H6N6 1097 aa27.08■■□□□ 1.93
FOXA1-205ENST00000557418 GRIPAP1Q4V328 841 aa27.07■■□□□ 1.92
FOXA1-205ENST00000557418 TMX4Q9H1E5 349 aaPredicted RBP27.07■■□□□ 1.92
FOXA1-205ENST00000557418 PPEF1O14829 653 aaPredicted RBP27.05■■□□□ 1.92
FOXA1-205ENST00000557418 TRIM28Q13263 835 aaKnown RBP27.05■■□□□ 1.92
FOXA1-205ENST00000557418 DDX58O95786 925 aaKnown RBP27.04■■□□□ 1.92
FOXA1-205ENST00000557418 IARSP41252 1262 aaKnown RBP27.04■■□□□ 1.92
FOXA1-205ENST00000557418 FAM89AQ96GI7 184 aa27.04■■□□□ 1.92
FOXA1-205ENST00000557418 PSMD1Q99460 953 aa27.04■■□□□ 1.92
FOXA1-205ENST00000557418 BBOX1O75936 387 aa27.03■■□□□ 1.92
FOXA1-205ENST00000557418 DDNO94850 711 aaPredicted RBP27.03■■□□□ 1.92
FOXA1-205ENST00000557418 FSTL1Q12841 308 aa27.03■■□□□ 1.92
FOXA1-205ENST00000557418 TWISTNBQ3B726 338 aaPredicted RBP27.03■■□□□ 1.92
FOXA1-205ENST00000557418 DDX46Q7L014 1031 aaKnown RBP27.03■■□□□ 1.92
FOXA1-205ENST00000557418 STK31Q9BXU1 1019 aa27.03■■□□□ 1.92
FOXA1-205ENST00000557418 ABCC4O15439 1325 aa27.01■■□□□ 1.91
FOXA1-205ENST00000557418 MYD88Q99836 296 aa27.01■■□□□ 1.91
FOXA1-205ENST00000557418 ATP6V0A2Q9Y487 856 aa27.01■■□□□ 1.91
FOXA1-205ENST00000557418 POTECB2RU33 542 aa27■■□□□ 1.91
FOXA1-205ENST00000557418 EXOSC9Q06265 439 aaKnown RBP27■■□□□ 1.91
FOXA1-205ENST00000557418 RTL5Q5HYW3 569 aaPredicted RBP27■■□□□ 1.91
FOXA1-205ENST00000557418 SMC1BQ8NDV3 1235 aa26.99■■□□□ 1.91
FOXA1-205ENST00000557418 JDP2Q8WYK2 163 aa26.99■■□□□ 1.91
FOXA1-205ENST00000557418 APLP1P51693 650 aa26.98■■□□□ 1.91
FOXA1-205ENST00000557418 SP8Q8IXZ3 490 aa26.98■■□□□ 1.91
FOXA1-205ENST00000557418 METTL22Q9BUU2 404 aaPredicted RBP26.98■■□□□ 1.91
FOXA1-205ENST00000557418 LAMB2P55268 1798 aa26.97■■□□□ 1.91
FOXA1-205ENST00000557418 GRAPQ13588 217 aa26.97■■□□□ 1.91
FOXA1-205ENST00000557418 KSR2Q6VAB6 950 aa26.97■■□□□ 1.91
FOXA1-205ENST00000557418 ZBTB38Q8NAP3 1195 aaPredicted RBP26.97■■□□□ 1.91
FOXA1-205ENST00000557418 CCDC191Q8NCU4 936 aa26.97■■□□□ 1.91
FOXA1-205ENST00000557418 GRAPLQ8TC17 118 aaPredicted RBP26.97■■□□□ 1.91
FOXA1-205ENST00000557418 WDR90Q96KV7 1748 aa26.96■■□□□ 1.91
FOXA1-205ENST00000557418 IRS4O14654 1257 aaPredicted RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms