RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 CPSF1Q10570 1443 aaKnown RBP12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 NOP2P46087 812 aaKnown RBP12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 MAP2K1Q02750 393 aaPredicted RBP12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 CCDC144BQ3MJ40 725 aa12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 TMEM132EQ6IEE7 984 aa12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 DRC7Q8IY82 874 aa12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 CCDC144CPQ8IYA2 1237 aa12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 PPME1Q9Y570 386 aa12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 YTHDC2Q9H6S0 1430 aaKnown RBP12.34□□□□□ -0.43
SUPT16H-207ENST00000557394 ELL2O00472 640 aaPredicted RBP12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 FYB1O15117 783 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 PLA2G4AP47712 749 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 DNM1Q05193 864 aaKnown RBP12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 ANKLE2Q86XL3 938 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 LRRC8AQ8IWT6 810 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 THUMPD2Q9BTF0 503 aaKnown RBP12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 TRIM5Q9C035 493 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 NUP62CLQ9H1M0 184 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 CLIP2Q9UDT6 1046 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 MTMR6Q9Y217 621 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 V9GYY5 206 aaPredicted RBP12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 TESPA1A2RU30 521 aaPredicted RBP12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 USP27XA6NNY8 438 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 TXLNBQ8N3L3 684 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 BANK1Q8NDB2 785 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 TRERF1Q96PN7 1200 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 L2HGDHQ9H9P8 463 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 STK26Q9P289 416 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 MSH6P52701 1360 aa12.33□□□□□ -0.44
SUPT16H-207ENST00000557394 DLC1Q96QB1 1528 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 KIF2AO00139 706 aaPredicted RBP12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 HMMRO75330 724 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 PNMA6AP0CW24 399 aaPredicted RBP12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 TSPAN18Q96SJ8 248 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 UBXN6Q9BZV1 441 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 RASSF4Q9H2L5 321 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 GPBP1L1Q9HC44 474 aaPredicted RBP12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 ELP1O95163 1332 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 CD163L1Q9NR16 1453 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 HTATSF1O43719 755 aaKnown RBP12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 DHX16O60231 1041 aaKnown RBP12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 ZRANB2O95218 330 aaKnown RBP eCLIP12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 ANO6Q4KMQ2 910 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 NBPF6Q5VWK0 638 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 SARM1Q6SZW1 724 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 NBPF5PQ86XG9 351 aaPredicted RBP12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 NBPF4Q96M43 638 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 MTA3Q9BTC8 594 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 LIMCH1Q9UPQ0 1083 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 SMC3Q9UQE7 1217 aa12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 CDK12Q9NYV4 1490 aaPredicted RBP12.32□□□□□ -0.44
SUPT16H-207ENST00000557394 TEX35Q5T0J7 233 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 NBPF10Q6P3W6 841 aaKnown RBP12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 EP400NLQ6ZTU2 488 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 PHACTR3Q96KR7 559 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 GOLGA6CA6NDK9 693 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 GOLGA6BA6NDN3 693 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 METP08581 1390 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 GOLGA6DP0CG33 693 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 CLCN6P51797 869 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 KRT24Q2M2I5 525 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 CCDC93Q567U6 631 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 RUFY3Q7L099 469 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 GTF3C6Q969F1 213 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 MEIS3Q99687 375 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 GOLGA6AQ9NYA3 693 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 STAP2Q9UGK3 403 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 RSPH14Q9UHP6 348 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 TBX22Q9Y458 520 aa12.31□□□□□ -0.44
SUPT16H-207ENST00000557394 LMTK3Q96Q04 1460 aa12.3□□□□□ -0.44
SUPT16H-207ENST00000557394 TTC21BQ7Z4L5 1316 aa12.3□□□□□ -0.44
SUPT16H-207ENST00000557394 LIG1P18858 919 aa12.3□□□□□ -0.44
SUPT16H-207ENST00000557394 SRPK2P78362 688 aaKnown RBP12.3□□□□□ -0.44
SUPT16H-207ENST00000557394 ARHGEF1Q92888 912 aaKnown RBP12.3□□□□□ -0.44
SUPT16H-207ENST00000557394 MRFAP1L1Q96HT8 127 aa12.3□□□□□ -0.44
SUPT16H-207ENST00000557394 CAVIN2O95810 425 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 SCP2P22307 547 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 AK2P54819 239 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 TPM4P67936 248 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 CCZ1BP86790 482 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 CCZ1P86791 482 aaPredicted RBP12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 CCAR2Q8N163 923 aaKnown RBP12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 CABP2Q9NPB3 220 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 POLKQ9UBT6 870 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 CPS1P31327 1500 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 TECPR2O15040 1411 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 ATP8B1O43520 1251 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 SYT10Q6XYQ8 523 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 SDR16C5Q8N3Y7 309 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 RNF217Q8TC41 542 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 TNMDQ9H2S6 317 aa12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 DDX19AQ9NUU7 478 aaKnown RBP12.29□□□□□ -0.44
SUPT16H-207ENST00000557394 NPHP4O75161 1426 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms