RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-223ENST00000557294 PHACTR3Q96KR7 559 aa24.66■■□□□ 1.54
PRKCH-223ENST00000557294 THSD7BQ9C0I4 1608 aa24.65■■□□□ 1.54
PRKCH-223ENST00000557294 TRIM26Q12899 539 aaPredicted RBP24.65■■□□□ 1.54
PRKCH-223ENST00000557294 HLFQ16534 295 aa24.65■■□□□ 1.54
PRKCH-223ENST00000557294 TRAF5O00463 557 aa24.64■■□□□ 1.54
PRKCH-223ENST00000557294 CA12O43570 354 aa24.64■■□□□ 1.54
PRKCH-223ENST00000557294 TSKSQ9UJT2 592 aa24.64■■□□□ 1.54
PRKCH-223ENST00000557294 AOC2O75106 756 aa24.63■■□□□ 1.53
PRKCH-223ENST00000557294 LARGE2Q8N3Y3 721 aa24.63■■□□□ 1.53
PRKCH-223ENST00000557294 LTBP1Q14766 1721 aa24.62■■□□□ 1.53
PRKCH-223ENST00000557294 HOXA10P31260 410 aaPredicted RBP24.62■■□□□ 1.53
PRKCH-223ENST00000557294 MCOLN1Q9GZU1 580 aa24.62■■□□□ 1.53
PRKCH-223ENST00000557294 NYXQ9GZU5 481 aa24.62■■□□□ 1.53
PRKCH-223ENST00000557294 COL3A1P02461 1466 aaPredicted RBP24.62■■□□□ 1.53
PRKCH-223ENST00000557294 SAPCD2Q86UD0 394 aa24.61■■□□□ 1.53
PRKCH-223ENST00000557294 COL4A5P29400 1685 aa24.61■■□□□ 1.53
PRKCH-223ENST00000557294 HHIPL1Q96JK4 782 aa24.6■■□□□ 1.53
PRKCH-223ENST00000557294 PRKAR2BP31323 418 aa24.59■■□□□ 1.53
PRKCH-223ENST00000557294 NUTM1Q86Y26 1132 aa24.59■■□□□ 1.53
PRKCH-223ENST00000557294 RPGRQ92834 1020 aaKnown RBP24.59■■□□□ 1.53
PRKCH-223ENST00000557294 CFAP44Q96MT7 982 aa24.59■■□□□ 1.53
PRKCH-223ENST00000557294 ADARB2Q9NS39 739 aaKnown RBP24.59■■□□□ 1.53
PRKCH-223ENST00000557294 KIF7Q2M1P5 1343 aa24.59■■□□□ 1.53
PRKCH-223ENST00000557294 RTF1Q92541 710 aaKnown RBP24.58■■□□□ 1.53
PRKCH-223ENST00000557294 ERVV-1B6SEH8 477 aa24.57■■□□□ 1.52
PRKCH-223ENST00000557294 BRPF1P55201 1214 aaPredicted RBP24.57■■□□□ 1.52
PRKCH-223ENST00000557294 NIM1KQ8IY84 436 aa24.57■■□□□ 1.52
PRKCH-223ENST00000557294 CRAMP1Q96RY5 1269 aa24.57■■□□□ 1.52
PRKCH-223ENST00000557294 RSPH6AQ9H0K4 717 aa24.57■■□□□ 1.52
PRKCH-223ENST00000557294 VPS33BQ9H267 617 aa24.57■■□□□ 1.52
PRKCH-223ENST00000557294 GPRC5DQ9NZD1 345 aa24.57■■□□□ 1.52
PRKCH-223ENST00000557294 CELF2O95319 508 aaKnown RBP24.56■■□□□ 1.52
PRKCH-223ENST00000557294 MCM10Q7L590 875 aa24.56■■□□□ 1.52
PRKCH-223ENST00000557294 RBM17Q96I25 401 aaKnown RBP24.56■■□□□ 1.52
PRKCH-223ENST00000557294 PGAP2Q9UHJ9 254 aa24.56■■□□□ 1.52
PRKCH-223ENST00000557294 ABCC12Q96J65 1359 aa24.55■■□□□ 1.52
PRKCH-223ENST00000557294 TRPM7Q96QT4 1865 aa24.55■■□□□ 1.52
PRKCH-223ENST00000557294 PPEF1O14829 653 aaPredicted RBP24.53■■□□□ 1.52
PRKCH-223ENST00000557294 PPIP5K2O43314 1243 aa24.53■■□□□ 1.52
PRKCH-223ENST00000557294 DGKZQ13574 1117 aa24.53■■□□□ 1.52
PRKCH-223ENST00000557294 NPC1L1Q9UHC9 1359 aa24.53■■□□□ 1.52
PRKCH-223ENST00000557294 TCERG1O14776 1098 aaKnown RBP24.52■■□□□ 1.52
PRKCH-223ENST00000557294 HTATSF1O43719 755 aaKnown RBP24.52■■□□□ 1.52
PRKCH-223ENST00000557294 CXCL9Q07325 125 aa24.52■■□□□ 1.52
PRKCH-223ENST00000557294 ZC3H15Q8WU90 426 aaKnown RBP24.52■■□□□ 1.52
PRKCH-223ENST00000557294 PCGF6Q9BYE7 350 aa24.52■■□□□ 1.52
PRKCH-223ENST00000557294 ZNRF3Q9ULT6 936 aa24.52■■□□□ 1.52
PRKCH-223ENST00000557294 RIC1Q4ADV7 1423 aa24.52■■□□□ 1.52
PRKCH-223ENST00000557294 TAF7Q15545 349 aaPredicted RBP24.51■■□□□ 1.51
PRKCH-223ENST00000557294 NGEFQ8N5V2 710 aa24.51■■□□□ 1.51
PRKCH-223ENST00000557294 GLIS2Q9BZE0 524 aaPredicted RBP24.51■■□□□ 1.51
PRKCH-223ENST00000557294 MAP3K15Q6ZN16 1313 aa24.51■■□□□ 1.51
PRKCH-223ENST00000557294 AOC3Q16853 763 aa24.5■■□□□ 1.51
PRKCH-223ENST00000557294 SUSD4Q5VX71 490 aa24.5■■□□□ 1.51
PRKCH-223ENST00000557294 CIAPIN1Q6FI81 312 aa24.5■■□□□ 1.51
PRKCH-223ENST00000557294 TMX4Q9H1E5 349 aaPredicted RBP24.5■■□□□ 1.51
PRKCH-223ENST00000557294 TNRC18O15417 2968 aaPredicted RBP24.5■■□□□ 1.51
PRKCH-223ENST00000557294 DCTN1Q14203 1278 aa24.49■■□□□ 1.51
PRKCH-223ENST00000557294 SLC51AQ86UW1 340 aa24.49■■□□□ 1.51
PRKCH-223ENST00000557294 ATP6V0A2Q9Y487 856 aa24.49■■□□□ 1.51
PRKCH-223ENST00000557294 IBTKQ9P2D0 1353 aaPredicted RBP24.49■■□□□ 1.51
PRKCH-223ENST00000557294 GMPSP49915 693 aaPredicted RBP24.48■■□□□ 1.51
PRKCH-223ENST00000557294 CNGB1Q14028 1251 aaPredicted RBP24.48■■□□□ 1.51
PRKCH-223ENST00000557294 CDC37L1Q7L3B6 337 aa24.48■■□□□ 1.51
PRKCH-223ENST00000557294 CFAP53Q96M91 514 aa24.48■■□□□ 1.51
PRKCH-223ENST00000557294 NUDCQ9Y266 331 aa24.48■■□□□ 1.51
PRKCH-223ENST00000557294 CASP8AP2Q9UKL3 1982 aa24.47■■□□□ 1.51
PRKCH-223ENST00000557294 UBN2Q6ZU65 1347 aa24.47■■□□□ 1.51
PRKCH-223ENST00000557294 GPTP24298 496 aa24.47■■□□□ 1.51
PRKCH-223ENST00000557294 HIRAP54198 1017 aaPredicted RBP24.47■■□□□ 1.51
PRKCH-223ENST00000557294 NOGQ13253 232 aa24.47■■□□□ 1.51
PRKCH-223ENST00000557294 KIF6Q6ZMV9 814 aa24.47■■□□□ 1.51
PRKCH-223ENST00000557294 TTLL7Q6ZT98 887 aa24.47■■□□□ 1.51
PRKCH-223ENST00000557294 ZNF34Q8IZ26 560 aa24.47■■□□□ 1.51
PRKCH-223ENST00000557294 SUPT20HQ8NEM7 779 aa24.47■■□□□ 1.51
PRKCH-223ENST00000557294 RTFDC1Q9BY42 306 aaPredicted RBP24.47■■□□□ 1.51
PRKCH-223ENST00000557294 MIS18AQ9NYP9 233 aa24.47■■□□□ 1.51
PRKCH-223ENST00000557294 NLRP3Q96P20 1036 aa24.46■■□□□ 1.51
PRKCH-223ENST00000557294 ZNF408Q9H9D4 720 aa24.46■■□□□ 1.51
PRKCH-223ENST00000557294 CDHR2Q9BYE9 1310 aa24.45■■□□□ 1.5
PRKCH-223ENST00000557294 C3orf67Q6ZVT6 689 aa24.45■■□□□ 1.5
PRKCH-223ENST00000557294 RRP7AQ9Y3A4 280 aaKnown RBP24.45■■□□□ 1.5
PRKCH-223ENST00000557294 NTSR2O95665 410 aa24.44■■□□□ 1.5
PRKCH-223ENST00000557294 U2AF1L5P0DN76 240 aaPredicted RBP24.44■■□□□ 1.5
PRKCH-223ENST00000557294 U2AF1Q01081 240 aaKnown RBP eCLIP24.44■■□□□ 1.5
PRKCH-223ENST00000557294 ZIC5Q96T25 663 aa24.44■■□□□ 1.5
PRKCH-223ENST00000557294 TNIP1Q15025 636 aa24.43■■□□□ 1.5
PRKCH-223ENST00000557294 SLC10A5Q5PT55 438 aa24.43■■□□□ 1.5
PRKCH-223ENST00000557294 PPP1R42Q7Z4L9 355 aa24.43■■□□□ 1.5
PRKCH-223ENST00000557294 BCL2L13Q9BXK5 485 aa24.43■■□□□ 1.5
PRKCH-223ENST00000557294 BBOX1O75936 387 aa24.42■■□□□ 1.5
PRKCH-223ENST00000557294 ZBTB3Q9H5J0 574 aa24.42■■□□□ 1.5
PRKCH-223ENST00000557294 NUP98P52948 1817 aa24.42■■□□□ 1.5
PRKCH-223ENST00000557294 MYL6BP14649 208 aa24.41■■□□□ 1.5
PRKCH-223ENST00000557294 HUNKP57058 714 aa24.41■■□□□ 1.5
PRKCH-223ENST00000557294 KIAA2012Q0VF49 1180 aa24.41■■□□□ 1.5
PRKCH-223ENST00000557294 GIGYF2Q6Y7W6 1299 aaKnown RBP24.41■■□□□ 1.5
PRKCH-223ENST00000557294 SP8Q8IXZ3 490 aa24.41■■□□□ 1.5
PRKCH-223ENST00000557294 PNISRQ8TF01 805 aaKnown RBP24.41■■□□□ 1.5
PRKCH-223ENST00000557294 CNOT7Q9UIV1 285 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms