RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 C4BP0C0L5 1744 aa13.19□□□□□ -0.3
HNRNPC-228ENST00000557033 SSFA2P28290 1259 aa13.18□□□□□ -0.3
HNRNPC-228ENST00000557033 C6orf132Q5T0Z8 1188 aa13.18□□□□□ -0.3
HNRNPC-228ENST00000557033 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
HNRNPC-228ENST00000557033 KDM6AO15550 1401 aaPredicted RBP13.18□□□□□ -0.3
HNRNPC-228ENST00000557033 HMOX1P09601 288 aa13.17□□□□□ -0.3
HNRNPC-228ENST00000557033 ITPK1Q13572 414 aa13.17□□□□□ -0.3
HNRNPC-228ENST00000557033 LINC00116Q8NCU8 138 aa13.17□□□□□ -0.3
HNRNPC-228ENST00000557033 PBXIP1Q96AQ6 731 aa13.17□□□□□ -0.3
HNRNPC-228ENST00000557033 ZNF831Q5JPB2 1677 aa13.16□□□□□ -0.3
HNRNPC-228ENST00000557033 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-228ENST00000557033 RC3H1Q5TC82 1133 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-228ENST00000557033 RSBN1LQ6PCB5 846 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-228ENST00000557033 BRD1O95696 1058 aa13.15□□□□□ -0.3
HNRNPC-228ENST00000557033 YY1P25490 414 aa13.15□□□□□ -0.3
HNRNPC-228ENST00000557033 KCNA1Q09470 495 aa13.15□□□□□ -0.3
HNRNPC-228ENST00000557033 CNGB1Q14028 1251 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-228ENST00000557033 RBM46Q8TBY0 533 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-228ENST00000557033 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
HNRNPC-228ENST00000557033 CFAP53Q96M91 514 aa13.15□□□□□ -0.3
HNRNPC-228ENST00000557033 UBR3Q6ZT12 1888 aa13.14□□□□□ -0.31
HNRNPC-228ENST00000557033 LILRB3O75022 631 aa13.14□□□□□ -0.31
HNRNPC-228ENST00000557033 CD46P15529 392 aa13.14□□□□□ -0.31
HNRNPC-228ENST00000557033 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-228ENST00000557033 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-228ENST00000557033 TRAPPC3LQ5T215 181 aa13.14□□□□□ -0.31
HNRNPC-228ENST00000557033 AMIGO3Q86WK7 504 aa13.14□□□□□ -0.31
HNRNPC-228ENST00000557033 ZNF710Q8N1W2 664 aa13.14□□□□□ -0.31
HNRNPC-228ENST00000557033 SLC4A9Q96Q91 983 aa13.14□□□□□ -0.31
HNRNPC-228ENST00000557033 RTCBQ9Y3I0 505 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-228ENST00000557033 SCN11AQ9UI33 1791 aa13.14□□□□□ -0.31
HNRNPC-228ENST00000557033 U2SURPO15042 1029 aaKnown RBP13.13□□□□□ -0.31
HNRNPC-228ENST00000557033 AP1G2O75843 785 aa13.13□□□□□ -0.31
HNRNPC-228ENST00000557033 GJA5P36382 358 aa13.13□□□□□ -0.31
HNRNPC-228ENST00000557033 MSL1Q68DK7 614 aa13.13□□□□□ -0.31
HNRNPC-228ENST00000557033 SLC52A2Q9HAB3 445 aa13.13□□□□□ -0.31
HNRNPC-228ENST00000557033 LGR6Q9HBX8 967 aa13.13□□□□□ -0.31
HNRNPC-228ENST00000557033 CD2APQ9Y5K6 639 aa13.13□□□□□ -0.31
HNRNPC-228ENST00000557033 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
HNRNPC-228ENST00000557033 COL3A1P02461 1466 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-228ENST00000557033 RNMTO43148 476 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-228ENST00000557033 PTCD1O75127 700 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-228ENST00000557033 QPCTQ16769 361 aa13.12□□□□□ -0.31
HNRNPC-228ENST00000557033 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
HNRNPC-228ENST00000557033 NUDCQ9Y266 331 aa13.12□□□□□ -0.31
HNRNPC-228ENST00000557033 USTQ9Y2C2 406 aa13.12□□□□□ -0.31
HNRNPC-228ENST00000557033 MOXD2PA6NHM9 499 aa13.11□□□□□ -0.31
HNRNPC-228ENST00000557033 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
HNRNPC-228ENST00000557033 PPP2R1AP30153 589 aa13.11□□□□□ -0.31
HNRNPC-228ENST00000557033 FOSBP53539 338 aa13.11□□□□□ -0.31
HNRNPC-228ENST00000557033 GPR162Q16538 588 aa13.11□□□□□ -0.31
HNRNPC-228ENST00000557033 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
HNRNPC-228ENST00000557033 RTL5Q5HYW3 569 aaPredicted RBP13.11□□□□□ -0.31
HNRNPC-228ENST00000557033 SMIM5Q71RC9 77 aa13.11□□□□□ -0.31
HNRNPC-228ENST00000557033 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
HNRNPC-228ENST00000557033 COLQQ9Y215 455 aaPredicted RBP13.11□□□□□ -0.31
HNRNPC-228ENST00000557033 PCDHGA4Q9Y5G9 962 aa13.11□□□□□ -0.31
HNRNPC-228ENST00000557033 PRSS12P56730 875 aa13.1□□□□□ -0.31
HNRNPC-228ENST00000557033 NUTM1Q86Y26 1132 aa13.1□□□□□ -0.31
HNRNPC-228ENST00000557033 NLGN1Q8N2Q7 840 aa13.1□□□□□ -0.31
HNRNPC-228ENST00000557033 GNAT3A8MTJ3 354 aa13.09□□□□□ -0.31
HNRNPC-228ENST00000557033 SEC24BO95487 1268 aa13.09□□□□□ -0.31
HNRNPC-228ENST00000557033 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-228ENST00000557033 NLGN2Q8NFZ4 835 aa13.09□□□□□ -0.31
HNRNPC-228ENST00000557033 ADAMTS19Q8TE59 1207 aa13.09□□□□□ -0.31
HNRNPC-228ENST00000557033 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
HNRNPC-228ENST00000557033 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.31
HNRNPC-228ENST00000557033 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-228ENST00000557033 RCCD1A6NED2 376 aa13.08□□□□□ -0.32
HNRNPC-228ENST00000557033 GRIN3BO60391 1043 aa13.08□□□□□ -0.32
HNRNPC-228ENST00000557033 RFX1P22670 979 aa13.08□□□□□ -0.32
HNRNPC-228ENST00000557033 RFC4P35249 363 aa13.08□□□□□ -0.32
HNRNPC-228ENST00000557033 MRC1P22897 1456 aa13.08□□□□□ -0.32
HNRNPC-228ENST00000557033 VIRMAQ69YN4 1812 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-228ENST00000557033 USP17L8P0C7I0 530 aa13.07□□□□□ -0.32
HNRNPC-228ENST00000557033 NDUFV2P19404 249 aa13.07□□□□□ -0.32
HNRNPC-228ENST00000557033 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-228ENST00000557033 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
HNRNPC-228ENST00000557033 CICQ96RK0 1608 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-228ENST00000557033 CHD4Q14839 1912 aa13.06□□□□□ -0.32
HNRNPC-228ENST00000557033 U2AF1L5P0DN76 240 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-228ENST00000557033 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
HNRNPC-228ENST00000557033 U2AF1Q01081 240 aaKnown RBP eCLIP13.06□□□□□ -0.326e-11■■□□□ 14.2
HNRNPC-228ENST00000557033 TEFQ10587 303 aa13.06□□□□□ -0.32
HNRNPC-228ENST00000557033 SLC39A6Q13433 755 aa13.06□□□□□ -0.32
HNRNPC-228ENST00000557033 INTS5Q6P9B9 1019 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-228ENST00000557033 ZDHHC16Q969W1 377 aa13.06□□□□□ -0.32
HNRNPC-228ENST00000557033 CDCA7LQ96GN5 454 aa13.06□□□□□ -0.32
HNRNPC-228ENST00000557033 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
HNRNPC-228ENST00000557033 MYH14Q7Z406 1995 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-228ENST00000557033 MMP10P09238 476 aa13.05□□□□□ -0.32
HNRNPC-228ENST00000557033 GYS1P13807 737 aa13.05□□□□□ -0.32
HNRNPC-228ENST00000557033 WASHC4Q2M389 1173 aa13.05□□□□□ -0.32
HNRNPC-228ENST00000557033 SULF1Q8IWU6 871 aa13.05□□□□□ -0.32
HNRNPC-228ENST00000557033 DNAJC10Q8IXB1 793 aa13.05□□□□□ -0.32
HNRNPC-228ENST00000557033 PELP1Q8IZL8 1130 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-228ENST00000557033 E9PSI1 815 aa13.04□□□□□ -0.32
HNRNPC-228ENST00000557033 CYP19A1P11511 503 aaPredicted RBP13.04□□□□□ -0.32
HNRNPC-228ENST00000557033 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
HNRNPC-228ENST00000557033 TEX13AQ9BXU3 409 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms