RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 CYP19A1P11511 503 aaPredicted RBP17.23■□□□□ 0.35
ABCD4-226ENST00000556971 REM2Q8IYK8 340 aaPredicted RBP17.23■□□□□ 0.35
ABCD4-226ENST00000556971 LARGE2Q8N3Y3 721 aa17.23■□□□□ 0.35
ABCD4-226ENST00000556971 ZC3H15Q8WU90 426 aaKnown RBP17.23■□□□□ 0.35
ABCD4-226ENST00000556971 FAM122AQ96E09 287 aa17.23■□□□□ 0.35
ABCD4-226ENST00000556971 ERBB4Q15303 1308 aa17.22■□□□□ 0.35
ABCD4-226ENST00000556971 NPR1P16066 1061 aa17.22■□□□□ 0.35
ABCD4-226ENST00000556971 PSMD1Q99460 953 aa17.22■□□□□ 0.35
ABCD4-226ENST00000556971 TRIM17Q9Y577 477 aa17.22■□□□□ 0.35
ABCD4-226ENST00000556971 GMPSP49915 693 aaPredicted RBP17.21■□□□□ 0.35
ABCD4-226ENST00000556971 NOM1Q5C9Z4 860 aaKnown RBP17.21■□□□□ 0.35
ABCD4-226ENST00000556971 HSP90AB1P08238 724 aaKnown RBP17.2■□□□□ 0.34
ABCD4-226ENST00000556971 DEFB123Q8N688 67 aa17.2■□□□□ 0.34
ABCD4-226ENST00000556971 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
ABCD4-226ENST00000556971 Q7L0L9 218 aa17.19■□□□□ 0.34
ABCD4-226ENST00000556971 NIM1KQ8IY84 436 aa17.19■□□□□ 0.34
ABCD4-226ENST00000556971 EYA1Q99502 592 aa17.19■□□□□ 0.34
ABCD4-226ENST00000556971 KIF24Q5T7B8 1368 aa17.18■□□□□ 0.34
ABCD4-226ENST00000556971 CANXP27824 592 aaKnown RBP17.18■□□□□ 0.34
ABCD4-226ENST00000556971 OTOP1Q7RTM1 612 aa17.18■□□□□ 0.34
ABCD4-226ENST00000556971 NFATC2IPQ8NCF5 419 aa17.18■□□□□ 0.34
ABCD4-226ENST00000556971 ARMC5Q96C12 935 aa17.18■□□□□ 0.34
ABCD4-226ENST00000556971 TMEM106CQ9BVX2 250 aa17.18■□□□□ 0.34
ABCD4-226ENST00000556971 GGNBP2Q9H3C7 697 aa17.18■□□□□ 0.34
ABCD4-226ENST00000556971 POLR2AP24928 1970 aaKnown RBP17.18■□□□□ 0.34
ABCD4-226ENST00000556971 CACNA1AO00555 2505 aa17.17■□□□□ 0.34
ABCD4-226ENST00000556971 ADM5C9JUS6 153 aa17.17■□□□□ 0.34
ABCD4-226ENST00000556971 KRT26Q7Z3Y9 468 aa17.17■□□□□ 0.34
ABCD4-226ENST00000556971 R3HDMLQ9H3Y0 253 aa17.17■□□□□ 0.34
ABCD4-226ENST00000556971 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
ABCD4-226ENST00000556971 SHTN1A0MZ66 631 aa17.16■□□□□ 0.34
ABCD4-226ENST00000556971 EMILIN1Q9Y6C2 1016 aa17.16■□□□□ 0.34
ABCD4-226ENST00000556971 MRC1P22897 1456 aa17.16■□□□□ 0.34
ABCD4-226ENST00000556971 ANKRD13DQ6ZTN6 518 aa17.15■□□□□ 0.34
ABCD4-226ENST00000556971 DPF3Q92784 378 aa17.15■□□□□ 0.34
ABCD4-226ENST00000556971 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
ABCD4-226ENST00000556971 ZNF530Q6P9A1 599 aaPredicted RBP17.13■□□□□ 0.33
ABCD4-226ENST00000556971 A0A087WZG4 1122 aa17.12■□□□□ 0.33
ABCD4-226ENST00000556971 A0A1W2PPC1 479 aa17.12■□□□□ 0.33
ABCD4-226ENST00000556971 CXCL9Q07325 125 aa17.12■□□□□ 0.33
ABCD4-226ENST00000556971 SLC51AQ86UW1 340 aa17.12■□□□□ 0.33
ABCD4-226ENST00000556971 BCL2L13Q9BXK5 485 aa17.12■□□□□ 0.33
ABCD4-226ENST00000556971 TBC1D2BQ9UPU7 963 aa17.12■□□□□ 0.33
ABCD4-226ENST00000556971 PTPN22Q9Y2R2 807 aa17.12■□□□□ 0.33
ABCD4-226ENST00000556971 ST20-MTHFSA0A0A6YYL1 179 aa17.11■□□□□ 0.33
ABCD4-226ENST00000556971 PPM1GO15355 546 aaPredicted RBP17.11■□□□□ 0.33
ABCD4-226ENST00000556971 MTHFSP49914 203 aa17.11■□□□□ 0.33
ABCD4-226ENST00000556971 EIF5P55010 431 aaKnown RBP17.11■□□□□ 0.33
ABCD4-226ENST00000556971 ZNF330Q9Y3S2 320 aaPredicted RBP17.11■□□□□ 0.33
ABCD4-226ENST00000556971 WASHC2AQ641Q2 1341 aa17.11■□□□□ 0.33
ABCD4-226ENST00000556971 CDHR2Q9BYE9 1310 aa17.11■□□□□ 0.33
ABCD4-226ENST00000556971 ROCK2O75116 1388 aaKnown RBP17.11■□□□□ 0.33
ABCD4-226ENST00000556971 FYB1O15117 783 aa17.1■□□□□ 0.33
ABCD4-226ENST00000556971 PPIP5K2O43314 1243 aa17.1■□□□□ 0.33
ABCD4-226ENST00000556971 SLC4A8Q2Y0W8 1093 aa17.1■□□□□ 0.33
ABCD4-226ENST00000556971 SNX27Q96L92 541 aa17.1■□□□□ 0.33
ABCD4-226ENST00000556971 MTMR10Q9NXD2 777 aa17.1■□□□□ 0.33
ABCD4-226ENST00000556971 AOC3Q16853 763 aa17.09■□□□□ 0.33
ABCD4-226ENST00000556971 NBPF5PQ86XG9 351 aaPredicted RBP17.09■□□□□ 0.33
ABCD4-226ENST00000556971 ZNF333Q96JL9 665 aa17.09■□□□□ 0.33
ABCD4-226ENST00000556971 RAB3GAP2Q9H2M9 1393 aa17.08■□□□□ 0.32
ABCD4-226ENST00000556971 ZNF609O15014 1411 aa17.07■□□□□ 0.32
ABCD4-226ENST00000556971 KLRG2A4D1S0 409 aaPredicted RBP17.07■□□□□ 0.32
ABCD4-226ENST00000556971 MYCP01106 439 aaPredicted RBP17.07■□□□□ 0.32
ABCD4-226ENST00000556971 ALDH1B1P30837 517 aa17.07■□□□□ 0.32
ABCD4-226ENST00000556971 MKRN3Q13064 507 aaKnown RBP17.07■□□□□ 0.32
ABCD4-226ENST00000556971 CNOT7Q9UIV1 285 aaKnown RBP17.07■□□□□ 0.32
ABCD4-226ENST00000556971 KIF20BQ96Q89 1820 aa17.06■□□□□ 0.32
ABCD4-226ENST00000556971 WTIPA6NIX2 430 aaPredicted RBP17.06■□□□□ 0.32
ABCD4-226ENST00000556971 TM4SF4P48230 202 aa17.06■□□□□ 0.32
ABCD4-226ENST00000556971 SLC39A6Q13433 755 aa17.06■□□□□ 0.32
ABCD4-226ENST00000556971 GPR153Q6NV75 609 aa17.06■□□□□ 0.32
ABCD4-226ENST00000556971 SAMD7Q7Z3H4 446 aa17.06■□□□□ 0.32
ABCD4-226ENST00000556971 MICALL2Q8IY33 904 aa17.06■□□□□ 0.32
ABCD4-226ENST00000556971 CFHR5Q9BXR6 569 aa17.06■□□□□ 0.32
ABCD4-226ENST00000556971 RAD17O75943 681 aa17.05■□□□□ 0.32
ABCD4-226ENST00000556971 ZNRF3Q9ULT6 936 aa17.05■□□□□ 0.32
ABCD4-226ENST00000556971 H7C1D1 291 aa17.04■□□□□ 0.32
ABCD4-226ENST00000556971 CAMTA2O94983 1202 aa17.04■□□□□ 0.32
ABCD4-226ENST00000556971 TBC1D10BQ4KMP7 808 aaPredicted RBP17.04■□□□□ 0.32
ABCD4-226ENST00000556971 PLEKHO1Q53GL0 409 aaPredicted RBP17.04■□□□□ 0.32
ABCD4-226ENST00000556971 CC2D2BQ6DHV5 1058 aa17.04■□□□□ 0.32
ABCD4-226ENST00000556971 DCPSQ96C86 337 aaKnown RBP17.04■□□□□ 0.32
ABCD4-226ENST00000556971 CDCA5Q96FF9 252 aa17.04■□□□□ 0.32
ABCD4-226ENST00000556971 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
ABCD4-226ENST00000556971 EGFRP00533 1210 aa17.03■□□□□ 0.32
ABCD4-226ENST00000556971 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
ABCD4-226ENST00000556971 CD99L2Q8TCZ2 262 aa17.03■□□□□ 0.32
ABCD4-226ENST00000556971 MUC3AQ02505 3323 aa17.03■□□□□ 0.32
ABCD4-226ENST00000556971 TMEM265A0A087WTH1 108 aa17.02■□□□□ 0.32
ABCD4-226ENST00000556971 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.32
ABCD4-226ENST00000556971 MOB2Q70IA6 237 aa17.02■□□□□ 0.32
ABCD4-226ENST00000556971 SREBF2Q12772 1141 aa17.01■□□□□ 0.31
ABCD4-226ENST00000556971 RPTORQ8N122 1335 aa17■□□□□ 0.31
ABCD4-226ENST00000556971 TCERG1O14776 1098 aaKnown RBP17■□□□□ 0.31
ABCD4-226ENST00000556971 SULF1Q8IWU6 871 aa17■□□□□ 0.31
ABCD4-226ENST00000556971 ERO1AQ96HE7 468 aa17■□□□□ 0.31
ABCD4-226ENST00000556971 NR2E3Q9Y5X4 410 aa17■□□□□ 0.31
ABCD4-226ENST00000556971 EYSQ5T1H1 3165 aa16.99■□□□□ 0.31
ABCD4-226ENST00000556971 SLC9C1Q4G0N8 1177 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms