RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 ALG2Q9H553 416 aa8.57□□□□□ -1.04
TMEM260-212ENST00000556810 PHF24Q9UPV7 400 aa8.57□□□□□ -1.04
TMEM260-212ENST00000556810 MAST1Q9Y2H9 1570 aa8.56□□□□□ -1.04
TMEM260-212ENST00000556810 BCRP11274 1271 aa8.56□□□□□ -1.04
TMEM260-212ENST00000556810 SKIP12755 728 aa8.56□□□□□ -1.04
TMEM260-212ENST00000556810 SMTNP53814 917 aa8.56□□□□□ -1.04
TMEM260-212ENST00000556810 FLIIQ13045 1269 aa8.56□□□□□ -1.04
TMEM260-212ENST00000556810 EML3Q32P44 896 aa8.56□□□□□ -1.04
TMEM260-212ENST00000556810 EFHC2Q5JST6 749 aa8.56□□□□□ -1.04
TMEM260-212ENST00000556810 SCARF2Q96GP6 870 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-212ENST00000556810 ATP10AO60312 1499 aa8.56□□□□□ -1.04
TMEM260-212ENST00000556810 ZNF644Q9H582 1327 aaPredicted RBP8.55□□□□□ -1.04
TMEM260-212ENST00000556810 C9orf84Q5VXU9 1444 aa8.55□□□□□ -1.04
TMEM260-212ENST00000556810 TMEM229AB2RXF0 380 aa8.55□□□□□ -1.04
TMEM260-212ENST00000556810 IRS1P35568 1242 aa8.55□□□□□ -1.04
TMEM260-212ENST00000556810 UBAP2LQ14157 1087 aaKnown RBP8.55□□□□□ -1.04
TMEM260-212ENST00000556810 TBC1D9Q6ZT07 1266 aa8.55□□□□□ -1.04
TMEM260-212ENST00000556810 ILDR2Q71H61 639 aa8.55□□□□□ -1.04
TMEM260-212ENST00000556810 KCTD17Q8N5Z5 321 aa8.55□□□□□ -1.04
TMEM260-212ENST00000556810 SERTAD1Q9UHV2 236 aa8.55□□□□□ -1.04
TMEM260-212ENST00000556810 SAMD9LQ8IVG5 1584 aa8.55□□□□□ -1.04
TMEM260-212ENST00000556810 SETD1BQ9UPS6 1966 aaKnown RBP8.55□□□□□ -1.04
TMEM260-212ENST00000556810 STRCQ7RTU9 1775 aa8.54□□□□□ -1.04
TMEM260-212ENST00000556810 PREX1Q8TCU6 1659 aa8.54□□□□□ -1.04
TMEM260-212ENST00000556810 TONSLQ96HA7 1378 aa8.54□□□□□ -1.04
TMEM260-212ENST00000556810 DISP3Q9P2K9 1392 aa8.54□□□□□ -1.04
TMEM260-212ENST00000556810 MAP2K3P46734 347 aa8.54□□□□□ -1.04
TMEM260-212ENST00000556810 HNRNPMP52272 730 aaKnown RBP eCLIP8.54□□□□□ -1.04
TMEM260-212ENST00000556810 NFATC2IPQ8NCF5 419 aa8.54□□□□□ -1.04
TMEM260-212ENST00000556810 MPHOSPH9Q99550 1183 aa8.54□□□□□ -1.04
TMEM260-212ENST00000556810 NIFKQ9BYG3 293 aaKnown RBP8.54□□□□□ -1.04
TMEM260-212ENST00000556810 CRISPLD1Q9H336 500 aa8.54□□□□□ -1.04
TMEM260-212ENST00000556810 NOD1Q9Y239 953 aa8.54□□□□□ -1.04
TMEM260-212ENST00000556810 PCDHGA11Q9Y5H2 935 aa8.54□□□□□ -1.04
TMEM260-212ENST00000556810 ARHGEF12Q9NZN5 1544 aa8.54□□□□□ -1.04
TMEM260-212ENST00000556810 MBD5Q9P267 1494 aa8.53□□□□□ -1.04
TMEM260-212ENST00000556810 LZTS3O60299 673 aaPredicted RBP8.53□□□□□ -1.04
TMEM260-212ENST00000556810 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
TMEM260-212ENST00000556810 AFAP1Q8N556 730 aa8.53□□□□□ -1.04
TMEM260-212ENST00000556810 NEDD1Q8NHV4 660 aa8.53□□□□□ -1.04
TMEM260-212ENST00000556810 SLC4A9Q96Q91 983 aa8.53□□□□□ -1.04
TMEM260-212ENST00000556810 RTEL1-TNFRSF6BF6WH68 1400 aa8.53□□□□□ -1.04
TMEM260-212ENST00000556810 ANKRD50Q9ULJ7 1429 aa8.53□□□□□ -1.04
TMEM260-212ENST00000556810 A6NJY4 79 aa8.52□□□□□ -1.05
TMEM260-212ENST00000556810 GTF2IP78347 998 aa8.52□□□□□ -1.05
TMEM260-212ENST00000556810 NCOA4Q13772 614 aa8.52□□□□□ -1.05
TMEM260-212ENST00000556810 MTFR1Q15390 333 aa8.52□□□□□ -1.05
TMEM260-212ENST00000556810 C1orf216Q8TAB5 229 aa8.52□□□□□ -1.05
TMEM260-212ENST00000556810 OXCT2Q9BYC2 517 aaPredicted RBP8.52□□□□□ -1.05
TMEM260-212ENST00000556810 LRRC4BQ9NT99 713 aa8.52□□□□□ -1.05
TMEM260-212ENST00000556810 ATXN7L1Q9ULK2 861 aaPredicted RBP8.52□□□□□ -1.05
TMEM260-212ENST00000556810 PLXNC1O60486 1568 aa8.52□□□□□ -1.05
TMEM260-212ENST00000556810 ATP4AP20648 1035 aa8.51□□□□□ -1.05
TMEM260-212ENST00000556810 NEUROD1Q13562 356 aa8.51□□□□□ -1.05
TMEM260-212ENST00000556810 AIDAQ96BJ3 306 aa8.51□□□□□ -1.05
TMEM260-212ENST00000556810 IQSEC3Q9UPP2 1182 aaPredicted RBP8.51□□□□□ -1.05
TMEM260-212ENST00000556810 KIF15Q9NS87 1388 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 SYCP2Q9BX26 1530 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 DUOX2Q9NRD8 1548 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 POM121CA8CG34 1229 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 USP17L5A8MUK1 530 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 CDK2AP1O14519 115 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 OIP5O43482 229 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 PSME1Q06323 249 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 ZNF295-AS1Q8N0V1 137 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 KLRG1Q96E93 195 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 ABHD17AQ96GS6 310 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 NDFIP2Q9NV92 336 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 USP3Q9Y6I4 520 aa8.5□□□□□ -1.05
TMEM260-212ENST00000556810 ABCC1P33527 1531 aa8.49□□□□□ -1.05
TMEM260-212ENST00000556810 UHRF1BP1Q6BDS2 1440 aa8.49□□□□□ -1.05
TMEM260-212ENST00000556810 BACH1O14867 736 aa8.49□□□□□ -1.05
TMEM260-212ENST00000556810 BNIP3LO60238 219 aa8.49□□□□□ -1.05
TMEM260-212ENST00000556810 FGFR3P22607 806 aa8.49□□□□□ -1.05
TMEM260-212ENST00000556810 NBPF1Q3BBV0 1214 aa8.49□□□□□ -1.05
TMEM260-212ENST00000556810 FIGNL1Q6PIW4 674 aa8.49□□□□□ -1.05
TMEM260-212ENST00000556810 DEPDC4Q8N2C3 294 aa8.49□□□□□ -1.05
TMEM260-212ENST00000556810 ADAMTS19Q8TE59 1207 aa8.49□□□□□ -1.05
TMEM260-212ENST00000556810 DNMT3AQ9Y6K1 912 aaPredicted RBP8.49□□□□□ -1.05
TMEM260-212ENST00000556810 ZNF518AQ6AHZ1 1483 aa8.49□□□□□ -1.05
TMEM260-212ENST00000556810 SPAG9O60271 1321 aaKnown RBP8.49□□□□□ -1.05
TMEM260-212ENST00000556810 CNTNAP5Q8WYK1 1306 aa8.49□□□□□ -1.05
TMEM260-212ENST00000556810 ERBINQ96RT1 1412 aa8.48□□□□□ -1.05
TMEM260-212ENST00000556810 PHF20L1A8MW92 1017 aa8.48□□□□□ -1.05
TMEM260-212ENST00000556810 PPP1R15AO75807 674 aaPredicted RBP8.48□□□□□ -1.05
TMEM260-212ENST00000556810 BMP4P12644 408 aa8.48□□□□□ -1.05
TMEM260-212ENST00000556810 PODNQ7Z5L7 613 aa8.48□□□□□ -1.05
TMEM260-212ENST00000556810 NLRP8Q86W28 1048 aa8.48□□□□□ -1.05
TMEM260-212ENST00000556810 BEND7Q8N7W2 519 aaPredicted RBP8.48□□□□□ -1.05
TMEM260-212ENST00000556810 ZCCHC2Q9C0B9 1178 aaKnown RBP8.48□□□□□ -1.05
TMEM260-212ENST00000556810 DNAAF2Q9NVR5 837 aaKnown RBP8.48□□□□□ -1.05
TMEM260-212ENST00000556810 ZNF358Q9NW07 568 aa8.48□□□□□ -1.05
TMEM260-212ENST00000556810 CABP1Q9NZU7 370 aa8.48□□□□□ -1.05
TMEM260-212ENST00000556810 GDF2Q9UK05 429 aaPredicted RBP8.48□□□□□ -1.05
TMEM260-212ENST00000556810 C3P01024 1663 aa8.48□□□□□ -1.05
TMEM260-212ENST00000556810 KDM5DQ9BY66 1539 aa8.48□□□□□ -1.05
TMEM260-212ENST00000556810 NUP155O75694 1391 aa8.48□□□□□ -1.05
TMEM260-212ENST00000556810 TATP17735 454 aaPredicted RBP8.47□□□□□ -1.05
TMEM260-212ENST00000556810 DIEXFQ68CQ4 756 aaKnown RBP8.47□□□□□ -1.05
TMEM260-212ENST00000556810 HOMEZQ8IX15 550 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms