RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 PPP1R42Q7Z4L9 355 aa13.81□□□□□ -0.2
GABRB3-211ENST00000556636 C7orf43Q8WVR3 580 aa13.81□□□□□ -0.2
GABRB3-211ENST00000556636 MYH16Q9H6N6 1097 aa13.81□□□□□ -0.2
GABRB3-211ENST00000556636 NPR1P16066 1061 aa13.8□□□□□ -0.2
GABRB3-211ENST00000556636 RIC3Q7Z5B4 369 aa13.8□□□□□ -0.2
GABRB3-211ENST00000556636 TRMT2AQ8IZ69 625 aaKnown RBP13.8□□□□□ -0.2
GABRB3-211ENST00000556636 ZNF784Q8NCA9 323 aaPredicted RBP13.8□□□□□ -0.2
GABRB3-211ENST00000556636 ZNF428Q96B54 188 aa13.8□□□□□ -0.2
GABRB3-211ENST00000556636 CDCA7LQ96GN5 454 aa13.8□□□□□ -0.2
GABRB3-211ENST00000556636 PRELPP51888 382 aa13.79□□□□□ -0.2
GABRB3-211ENST00000556636 CNKSR1Q969H4 720 aa13.79□□□□□ -0.2
GABRB3-211ENST00000556636 PI4KAP2A4QPH2 592 aa13.78□□□□□ -0.2
GABRB3-211ENST00000556636 E9PSI1 815 aa13.78□□□□□ -0.2
GABRB3-211ENST00000556636 C21orf2O43822 256 aa13.78□□□□□ -0.2
GABRB3-211ENST00000556636 HOXA10P31260 410 aaPredicted RBP13.78□□□□□ -0.2
GABRB3-211ENST00000556636 PRPF40BQ6NWY9 871 aaKnown RBP13.78□□□□□ -0.2
GABRB3-211ENST00000556636 KSR2Q6VAB6 950 aa13.78□□□□□ -0.2
GABRB3-211ENST00000556636 PI4KAP1Q8N8J0 262 aa13.78□□□□□ -0.2
GABRB3-211ENST00000556636 METTL22Q9BUU2 404 aaPredicted RBP13.78□□□□□ -0.2
GABRB3-211ENST00000556636 STK31Q9BXU1 1019 aa13.78□□□□□ -0.2
GABRB3-211ENST00000556636 TRMT112Q9UI30 125 aaKnown RBP13.78□□□□□ -0.2
GABRB3-211ENST00000556636 RIC1Q4ADV7 1423 aa13.78□□□□□ -0.2
GABRB3-211ENST00000556636 NFKBIEO00221 500 aa13.77□□□□□ -0.21
GABRB3-211ENST00000556636 HCLS1P14317 486 aaPredicted RBP13.77□□□□□ -0.21
GABRB3-211ENST00000556636 RNF123Q5XPI4 1314 aa13.77□□□□□ -0.21
GABRB3-211ENST00000556636 MYD88Q99836 296 aa13.77□□□□□ -0.21
GABRB3-211ENST00000556636 MAP3K2Q9Y2U5 619 aa13.77□□□□□ -0.21
GABRB3-211ENST00000556636 CHD4Q14839 1912 aa13.76□□□□□ -0.21
GABRB3-211ENST00000556636 ADCY9O60503 1353 aa13.76□□□□□ -0.21
GABRB3-211ENST00000556636 SH3TC1Q8TE82 1336 aa13.76□□□□□ -0.21
GABRB3-211ENST00000556636 DDX58O95786 925 aaKnown RBP13.76□□□□□ -0.21
GABRB3-211ENST00000556636 IGKV5-2P06315 115 aa13.76□□□□□ -0.21
GABRB3-211ENST00000556636 ALDH1B1P30837 517 aa13.76□□□□□ -0.21
GABRB3-211ENST00000556636 FLIIQ13045 1269 aa13.76□□□□□ -0.21
GABRB3-211ENST00000556636 FAM89AQ96GI7 184 aa13.76□□□□□ -0.21
GABRB3-211ENST00000556636 NLRP3Q96P20 1036 aa13.76□□□□□ -0.21
GABRB3-211ENST00000556636 ZNF219Q9P2Y4 722 aaPredicted RBP13.76□□□□□ -0.21
GABRB3-211ENST00000556636 RASSF7Q02833 373 aa13.75□□□□□ -0.21
GABRB3-211ENST00000556636 C9orf131Q5VYM1 1079 aa13.75□□□□□ -0.21
GABRB3-211ENST00000556636 OLFM4Q6UX06 510 aa13.75□□□□□ -0.21
GABRB3-211ENST00000556636 CCDC191Q8NCU4 936 aa13.75□□□□□ -0.21
GABRB3-211ENST00000556636 CRAMP1Q96RY5 1269 aa13.75□□□□□ -0.21
GABRB3-211ENST00000556636 COL11A2P13942 1736 aaPredicted RBP13.75□□□□□ -0.21
GABRB3-211ENST00000556636 ARFGEF1Q9Y6D6 1849 aa13.74□□□□□ -0.21
GABRB3-211ENST00000556636 DLEC1Q9Y238 1755 aa13.74□□□□□ -0.21
GABRB3-211ENST00000556636 ZBTB38Q8NAP3 1195 aaPredicted RBP13.74□□□□□ -0.21
GABRB3-211ENST00000556636 SLX4Q8IY92 1834 aa13.74□□□□□ -0.21
GABRB3-211ENST00000556636 SF3B3Q15393 1217 aaKnown RBP13.73□□□□□ -0.21
GABRB3-211ENST00000556636 RTL5Q5HYW3 569 aaPredicted RBP13.73□□□□□ -0.21
GABRB3-211ENST00000556636 SLC51AQ86UW1 340 aa13.73□□□□□ -0.21
GABRB3-211ENST00000556636 JARID2Q92833 1246 aaPredicted RBP13.73□□□□□ -0.21
GABRB3-211ENST00000556636 RPGRQ92834 1020 aaKnown RBP13.73□□□□□ -0.21
GABRB3-211ENST00000556636 TNRC6CQ9HCJ0 1690 aaKnown RBP13.72□□□□□ -0.21
GABRB3-211ENST00000556636 NEURL1BA8MQ27 555 aa13.72□□□□□ -0.21
GABRB3-211ENST00000556636 IRS4O14654 1257 aaPredicted RBP13.72□□□□□ -0.21
GABRB3-211ENST00000556636 PCCAP05165 728 aaPredicted RBP13.72□□□□□ -0.21
GABRB3-211ENST00000556636 LMNB1P20700 586 aa13.72□□□□□ -0.21
GABRB3-211ENST00000556636 FKBP5Q13451 457 aaPredicted RBP13.72□□□□□ -0.21
GABRB3-211ENST00000556636 CWF19L2Q2TBE0 894 aaKnown RBP13.72□□□□□ -0.21
GABRB3-211ENST00000556636 DNAAF4Q8WXU2 420 aa13.72□□□□□ -0.21
GABRB3-211ENST00000556636 RBM17Q96I25 401 aaKnown RBP13.72□□□□□ -0.21
GABRB3-211ENST00000556636 CWC25Q9NXE8 425 aaPredicted RBP13.72□□□□□ -0.21
GABRB3-211ENST00000556636 RNF181Q9P0P0 153 aa13.72□□□□□ -0.21
GABRB3-211ENST00000556636 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.21
GABRB3-211ENST00000556636 F6X3S4 739 aa13.71□□□□□ -0.21
GABRB3-211ENST00000556636 SOGA3Q5TF21 947 aa13.71□□□□□ -0.21
GABRB3-211ENST00000556636 MRPL50Q8N5N7 158 aaKnown RBP13.71□□□□□ -0.21
GABRB3-211ENST00000556636 SNED1Q8TER0 1413 aa13.71□□□□□ -0.22
GABRB3-211ENST00000556636 H7C1W4 665 aa13.7□□□□□ -0.22
GABRB3-211ENST00000556636 CCDC93Q567U6 631 aa13.7□□□□□ -0.22
GABRB3-211ENST00000556636 SSH1Q8WYL5 1049 aa13.7□□□□□ -0.22
GABRB3-211ENST00000556636 ANKRD36CQ5JPF3 1778 aa13.7□□□□□ -0.22
GABRB3-211ENST00000556636 ABCC4O15439 1325 aa13.69□□□□□ -0.22
GABRB3-211ENST00000556636 ARFGEF2Q9Y6D5 1785 aa13.69□□□□□ -0.22
GABRB3-211ENST00000556636 BBOX1O75936 387 aa13.69□□□□□ -0.22
GABRB3-211ENST00000556636 CASP7P55210 303 aa13.69□□□□□ -0.22
GABRB3-211ENST00000556636 NEXNQ0ZGT2 675 aa13.69□□□□□ -0.22
GABRB3-211ENST00000556636 GCKRQ14397 625 aa13.69□□□□□ -0.22
GABRB3-211ENST00000556636 BEND3Q5T5X7 828 aa13.69□□□□□ -0.22
GABRB3-211ENST00000556636 RTKN2Q8IZC4 609 aa13.69□□□□□ -0.22
GABRB3-211ENST00000556636 LINS1Q8NG48 757 aa13.69□□□□□ -0.22
GABRB3-211ENST00000556636 TAOK3Q9H2K8 898 aa13.69□□□□□ -0.22
GABRB3-211ENST00000556636 PPEF1O14829 653 aaPredicted RBP13.68□□□□□ -0.22
GABRB3-211ENST00000556636 FKBP4Q02790 459 aaKnown RBP eCLIP13.68□□□□□ -0.22
GABRB3-211ENST00000556636 GRAPQ13588 217 aa13.68□□□□□ -0.22
GABRB3-211ENST00000556636 CC2D2BQ6DHV5 1058 aa13.68□□□□□ -0.22
GABRB3-211ENST00000556636 GRAPLQ8TC17 118 aaPredicted RBP13.68□□□□□ -0.22
GABRB3-211ENST00000556636 ATP6V0A2Q9Y487 856 aa13.68□□□□□ -0.22
GABRB3-211ENST00000556636 CDHR2Q9BYE9 1310 aa13.67□□□□□ -0.22
GABRB3-211ENST00000556636 PDE8AO60658 829 aa13.67□□□□□ -0.22
GABRB3-211ENST00000556636 HNRNPUQ00839 825 aaKnown RBP eCLIP13.67□□□□□ -0.22
GABRB3-211ENST00000556636 ALDH1L2Q3SY69 923 aa13.67□□□□□ -0.22
GABRB3-211ENST00000556636 DDX46Q7L014 1031 aaKnown RBP13.67□□□□□ -0.22
GABRB3-211ENST00000556636 SP8Q8IXZ3 490 aa13.67□□□□□ -0.22
GABRB3-211ENST00000556636 ZNF526Q8TF50 670 aaPredicted RBP13.67□□□□□ -0.22
GABRB3-211ENST00000556636 CELF1Q92879 486 aaKnown RBP13.67□□□□□ -0.22
GABRB3-211ENST00000556636 PSMD1Q99460 953 aa13.67□□□□□ -0.22
GABRB3-211ENST00000556636 SBF1O95248 1867 aa13.66□□□□□ -0.22
GABRB3-211ENST00000556636 CT47B1P0C2W7 299 aaPredicted RBP13.66□□□□□ -0.22
GABRB3-211ENST00000556636 GPBP1L1Q9HC44 474 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms