RNA–Protein interactions for RNA: ENST00000556577.1

STRN3-208, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-208ENST00000556577 ATP8B2P98198 1209 aa9.73□□□□□ -0.85
STRN3-208ENST00000556577 GCKRQ14397 625 aa9.73□□□□□ -0.85
STRN3-208ENST00000556577 MAP3K15Q6ZN16 1313 aa9.73□□□□□ -0.85
STRN3-208ENST00000556577 ATP5J2-PTCD1G3V325 749 aa9.72□□□□□ -0.85
STRN3-208ENST00000556577 RXRBP28702 533 aa9.72□□□□□ -0.85
STRN3-208ENST00000556577 NUCB1Q02818 461 aa9.72□□□□□ -0.85
STRN3-208ENST00000556577 ITPK1Q13572 414 aa9.72□□□□□ -0.85
STRN3-208ENST00000556577 HSP90AB3PQ58FF7 597 aa9.72□□□□□ -0.85
STRN3-208ENST00000556577 ANKRD45Q5TZF3 282 aa9.72□□□□□ -0.85
STRN3-208ENST00000556577 SKAP1Q86WV1 359 aa9.72□□□□□ -0.85
STRN3-208ENST00000556577 BCL11BQ9C0K0 894 aaPredicted RBP9.72□□□□□ -0.85
STRN3-208ENST00000556577 DCTPP1Q9H773 170 aa9.72□□□□□ -0.85
STRN3-208ENST00000556577 CWC25Q9NXE8 425 aaPredicted RBP9.72□□□□□ -0.85
STRN3-208ENST00000556577 UTYO14607 1347 aa9.72□□□□□ -0.85
STRN3-208ENST00000556577 BCORQ6W2J9 1755 aa9.71□□□□□ -0.85
STRN3-208ENST00000556577 A0A087WZG4 1122 aa9.71□□□□□ -0.86
STRN3-208ENST00000556577 PTF1AQ7RTS3 328 aa9.71□□□□□ -0.86
STRN3-208ENST00000556577 CHD1LQ86WJ1 897 aa9.71□□□□□ -0.86
STRN3-208ENST00000556577 DZIP3Q86Y13 1208 aaKnown RBP9.71□□□□□ -0.86
STRN3-208ENST00000556577 CCDC191Q8NCU4 936 aa9.71□□□□□ -0.86
STRN3-208ENST00000556577 LNPKQ9C0E8 428 aa9.71□□□□□ -0.86
STRN3-208ENST00000556577 CCNL1Q9UK58 526 aaPredicted RBP9.71□□□□□ -0.86
STRN3-208ENST00000556577 CNTNAP4Q9C0A0 1308 aa9.71□□□□□ -0.86
STRN3-208ENST00000556577 PNMA6EA0A0J9YXQ4 647 aa9.7□□□□□ -0.86
STRN3-208ENST00000556577 ERVV-1B6SEH8 477 aa9.7□□□□□ -0.86
STRN3-208ENST00000556577 RIOK3O14730 519 aaKnown RBP9.7□□□□□ -0.86
STRN3-208ENST00000556577 SRGAP3O43295 1099 aa9.7□□□□□ -0.86
STRN3-208ENST00000556577 EIF5P55010 431 aaKnown RBP9.7□□□□□ -0.86
STRN3-208ENST00000556577 TCIRG1Q13488 830 aa9.7□□□□□ -0.86
STRN3-208ENST00000556577 INTS5Q6P9B9 1019 aaKnown RBP9.7□□□□□ -0.86
STRN3-208ENST00000556577 GIGYF2Q6Y7W6 1299 aaKnown RBP9.7□□□□□ -0.86
STRN3-208ENST00000556577 UBE3BQ7Z3V4 1068 aa9.7□□□□□ -0.86
STRN3-208ENST00000556577 PPP1R42Q7Z4L9 355 aa9.7□□□□□ -0.86
STRN3-208ENST00000556577 HS6ST3Q8IZP7 471 aa9.7□□□□□ -0.86
STRN3-208ENST00000556577 SUCLG2Q96I99 432 aa9.7□□□□□ -0.86
STRN3-208ENST00000556577 COL15A1P39059 1388 aa9.7□□□□□ -0.86
STRN3-208ENST00000556577 APBB1O00213 710 aa9.69□□□□□ -0.86
STRN3-208ENST00000556577 MYH3P11055 1940 aa9.69□□□□□ -0.86
STRN3-208ENST00000556577 MTX1Q13505 466 aa9.69□□□□□ -0.86
STRN3-208ENST00000556577 HSP90AB4PQ58FF6 505 aa9.69□□□□□ -0.86
STRN3-208ENST00000556577 LINC00116Q8NCU8 138 aa9.69□□□□□ -0.86
STRN3-208ENST00000556577 SSH3Q8TE77 659 aa9.69□□□□□ -0.86
STRN3-208ENST00000556577 ISCA1Q9BUE6 129 aa9.69□□□□□ -0.86
STRN3-208ENST00000556577 BICC1Q9H694 974 aaKnown RBP9.69□□□□□ -0.86
STRN3-208ENST00000556577 TBC1D2BQ9UPU7 963 aa9.69□□□□□ -0.86
STRN3-208ENST00000556577 C4BP0C0L5 1744 aa9.68□□□□□ -0.86
STRN3-208ENST00000556577 SCN7AQ01118 1682 aa9.68□□□□□ -0.86
STRN3-208ENST00000556577 HMGB2P26583 209 aaKnown RBP9.68□□□□□ -0.86
STRN3-208ENST00000556577 TRIM28Q13263 835 aaKnown RBP9.68□□□□□ -0.86
STRN3-208ENST00000556577 OS9Q13438 667 aaPredicted RBP9.68□□□□□ -0.86
STRN3-208ENST00000556577 RC3H1Q5TC82 1133 aaKnown RBP9.68□□□□□ -0.86
STRN3-208ENST00000556577 TSHZ2Q9NRE2 1034 aa9.68□□□□□ -0.86
STRN3-208ENST00000556577 EXOC6BQ9Y2D4 811 aa9.68□□□□□ -0.86
STRN3-208ENST00000556577 ZNF652Q9Y2D9 606 aa9.68□□□□□ -0.86
STRN3-208ENST00000556577 H7C1W4 665 aa9.67□□□□□ -0.86
STRN3-208ENST00000556577 GNPATO15228 680 aa9.67□□□□□ -0.86
STRN3-208ENST00000556577 RAB11FIP3O75154 756 aa9.67□□□□□ -0.86
STRN3-208ENST00000556577 SURF6O75683 361 aaKnown RBP9.67□□□□□ -0.86
STRN3-208ENST00000556577 TRIM37O94972 964 aa9.67□□□□□ -0.86
STRN3-208ENST00000556577 GPTP24298 496 aa9.67□□□□□ -0.86
STRN3-208ENST00000556577 PDE4AP27815 886 aa9.67□□□□□ -0.86
STRN3-208ENST00000556577 KCNQ4P56696 695 aa9.67□□□□□ -0.86
STRN3-208ENST00000556577 HLFQ16534 295 aa9.67□□□□□ -0.86
STRN3-208ENST00000556577 BBXQ8WY36 941 aaPredicted RBP9.67□□□□□ -0.86
STRN3-208ENST00000556577 LRRCC1Q9C099 1032 aa9.67□□□□□ -0.86
STRN3-208ENST00000556577 BCL11AQ9H165 835 aa9.67□□□□□ -0.86
STRN3-208ENST00000556577 CAMTA2O94983 1202 aa9.66□□□□□ -0.86
STRN3-208ENST00000556577 PCCAP05165 728 aaPredicted RBP9.66□□□□□ -0.86
STRN3-208ENST00000556577 PLCB2Q00722 1185 aa9.66□□□□□ -0.86
STRN3-208ENST00000556577 FAM161AQ3B820 660 aa9.66□□□□□ -0.86
STRN3-208ENST00000556577 RTL5Q5HYW3 569 aaPredicted RBP9.66□□□□□ -0.86
STRN3-208ENST00000556577 SLC27A3Q5K4L6 730 aa9.66□□□□□ -0.86
STRN3-208ENST00000556577 ERC1Q8IUD2 1116 aa9.66□□□□□ -0.86
STRN3-208ENST00000556577 JARID2Q92833 1246 aaPredicted RBP9.66□□□□□ -0.86
STRN3-208ENST00000556577 KAZALD1Q96I82 304 aa9.66□□□□□ -0.86
STRN3-208ENST00000556577 AK7Q96M32 723 aa9.66□□□□□ -0.86
STRN3-208ENST00000556577 CHMP3Q9Y3E7 222 aa9.66□□□□□ -0.86
STRN3-208ENST00000556577 RTCBQ9Y3I0 505 aaKnown RBP9.66□□□□□ -0.86
STRN3-208ENST00000556577 C4AP0C0L4 1744 aa9.65□□□□□ -0.86
STRN3-208ENST00000556577 C19orf67A6NJJ6 358 aa9.65□□□□□ -0.86
STRN3-208ENST00000556577 SMARCA5O60264 1052 aaPredicted RBP9.65□□□□□ -0.86
STRN3-208ENST00000556577 RPS6KA4O75676 772 aa9.65□□□□□ -0.86
STRN3-208ENST00000556577 PYGBP11216 843 aa9.65□□□□□ -0.86
STRN3-208ENST00000556577 CASP7P55210 303 aa9.65□□□□□ -0.86
STRN3-208ENST00000556577 G3BP1Q13283 466 aaKnown RBP eCLIP9.65□□□□□ -0.86
STRN3-208ENST00000556577 RABL6Q3YEC7 729 aaPredicted RBP9.65□□□□□ -0.86
STRN3-208ENST00000556577 PARP10Q53GL7 1025 aa9.65□□□□□ -0.86
STRN3-208ENST00000556577 POTEAQ6S8J7 498 aa9.65□□□□□ -0.86
STRN3-208ENST00000556577 NLRP10Q86W26 655 aa9.65□□□□□ -0.86
STRN3-208ENST00000556577 ZBTB38Q8NAP3 1195 aaPredicted RBP9.65□□□□□ -0.86
STRN3-208ENST00000556577 KIF1BPQ96EK5 621 aa9.65□□□□□ -0.86
STRN3-208ENST00000556577 TRMT112Q9UI30 125 aaKnown RBP9.65□□□□□ -0.86
STRN3-208ENST00000556577 TAOK2Q9UL54 1235 aa9.65□□□□□ -0.86
STRN3-208ENST00000556577 UBR3Q6ZT12 1888 aa9.65□□□□□ -0.86
STRN3-208ENST00000556577 LAMB2P55268 1798 aa9.65□□□□□ -0.87
STRN3-208ENST00000556577 TNS1Q9HBL0 1735 aaKnown RBP9.65□□□□□ -0.87
STRN3-208ENST00000556577 CDHR2Q9BYE9 1310 aa9.64□□□□□ -0.87
STRN3-208ENST00000556577 ZPR1O75312 459 aa9.64□□□□□ -0.87
STRN3-208ENST00000556577 EPHA10Q5JZY3 1008 aa9.64□□□□□ -0.87
STRN3-208ENST00000556577 LMBR1LQ6UX01 489 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms