RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 HDAC1Q13547 482 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-218ENST00000556343 ZNF827Q17R98 1081 aa11.49□□□□□ -0.57
ACTN1-218ENST00000556343 B4GALNT3Q6L9W6 998 aa11.49□□□□□ -0.57
ACTN1-218ENST00000556343 TPTE2Q6XPS3 522 aa11.49□□□□□ -0.57
ACTN1-218ENST00000556343 CENPQQ7L2Z9 268 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-218ENST00000556343 UBE3BQ7Z3V4 1068 aa11.49□□□□□ -0.57
ACTN1-218ENST00000556343 UPF1Q92900 1129 aaKnown RBP eCLIP11.49□□□□□ -0.57
ACTN1-218ENST00000556343 C1orf115Q9H7X2 142 aa11.49□□□□□ -0.57
ACTN1-218ENST00000556343 PCDHB15Q9Y5E8 787 aa11.49□□□□□ -0.57
ACTN1-218ENST00000556343 RREB1Q92766 1687 aa11.49□□□□□ -0.57
ACTN1-218ENST00000556343 COL5A3P25940 1745 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-218ENST00000556343 CEP85Q6P2H3 762 aa11.48□□□□□ -0.57
ACTN1-218ENST00000556343 BICDL1Q6ZP65 573 aa11.48□□□□□ -0.57
ACTN1-218ENST00000556343 NBPF5PQ86XG9 351 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-218ENST00000556343 GCC1Q96CN9 775 aa11.48□□□□□ -0.57
ACTN1-218ENST00000556343 SRP68Q9UHB9 627 aaKnown RBP11.48□□□□□ -0.57
ACTN1-218ENST00000556343 SH3TC1Q8TE82 1336 aa11.48□□□□□ -0.57
ACTN1-218ENST00000556343 CDHR2Q9BYE9 1310 aa11.48□□□□□ -0.57
ACTN1-218ENST00000556343 RGPD3A6NKT7 1758 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-218ENST00000556343 RGPD4Q7Z3J3 1758 aa11.48□□□□□ -0.57
ACTN1-218ENST00000556343 IRS4O14654 1257 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-218ENST00000556343 PDE8AO60658 829 aa11.47□□□□□ -0.57
ACTN1-218ENST00000556343 GYS1P13807 737 aa11.47□□□□□ -0.57
ACTN1-218ENST00000556343 HSP90AB4PQ58FF6 505 aa11.47□□□□□ -0.57
ACTN1-218ENST00000556343 SUSD4Q5VX71 490 aa11.47□□□□□ -0.57
ACTN1-218ENST00000556343 TBC1D9BQ66K14 1250 aa11.47□□□□□ -0.57
ACTN1-218ENST00000556343 COL23A1Q86Y22 540 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-218ENST00000556343 SLC16A10Q8TF71 515 aa11.47□□□□□ -0.57
ACTN1-218ENST00000556343 SUCLG2Q96I99 432 aa11.47□□□□□ -0.57
ACTN1-218ENST00000556343 PLA2G12BQ9BX93 195 aa11.47□□□□□ -0.57
ACTN1-218ENST00000556343 BCL2L12Q9HB09 334 aa11.47□□□□□ -0.57
ACTN1-218ENST00000556343 MYH14Q7Z406 1995 aaKnown RBP11.47□□□□□ -0.57
ACTN1-218ENST00000556343 TNS1Q9HBL0 1735 aaKnown RBP11.46□□□□□ -0.57
ACTN1-218ENST00000556343 FAM177BA6PVY3 158 aa11.46□□□□□ -0.57
ACTN1-218ENST00000556343 SRGAP3O43295 1099 aa11.46□□□□□ -0.57
ACTN1-218ENST00000556343 FAM89AQ96GI7 184 aa11.46□□□□□ -0.57
ACTN1-218ENST00000556343 CARMIL3Q8ND23 1372 aa11.45□□□□□ -0.58
ACTN1-218ENST00000556343 PNPLA7Q6ZV29 1317 aa11.45□□□□□ -0.58
ACTN1-218ENST00000556343 TAF1LQ8IZX4 1826 aa11.45□□□□□ -0.58
ACTN1-218ENST00000556343 CASP7P55210 303 aa11.45□□□□□ -0.58
ACTN1-218ENST00000556343 ST5P78524 1137 aa11.45□□□□□ -0.58
ACTN1-218ENST00000556343 MTX1Q13505 466 aa11.45□□□□□ -0.58
ACTN1-218ENST00000556343 NFIXQ14938 502 aa11.45□□□□□ -0.58
ACTN1-218ENST00000556343 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-218ENST00000556343 SMIM5Q71RC9 77 aa11.45□□□□□ -0.58
ACTN1-218ENST00000556343 AMIGO3Q86WK7 504 aa11.45□□□□□ -0.58
ACTN1-218ENST00000556343 BICC1Q9H694 974 aaKnown RBP11.45□□□□□ -0.58
ACTN1-218ENST00000556343 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
ACTN1-218ENST00000556343 PARP3Q9Y6F1 533 aa11.45□□□□□ -0.58
ACTN1-218ENST00000556343 UBN2Q6ZU65 1347 aa11.44□□□□□ -0.58
ACTN1-218ENST00000556343 RAB11FIP3O75154 756 aa11.44□□□□□ -0.58
ACTN1-218ENST00000556343 NTSR2O95665 410 aa11.44□□□□□ -0.58
ACTN1-218ENST00000556343 TM4SF1P30408 202 aa11.44□□□□□ -0.58
ACTN1-218ENST00000556343 CCDC57Q2TAC2 916 aa11.44□□□□□ -0.58
ACTN1-218ENST00000556343 RABL6Q3YEC7 729 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-218ENST00000556343 CCDC152Q4G0S7 254 aa11.44□□□□□ -0.58
ACTN1-218ENST00000556343 TAF7LQ5H9L4 462 aa11.44□□□□□ -0.58
ACTN1-218ENST00000556343 SLC10A5Q5PT55 438 aa11.44□□□□□ -0.58
ACTN1-218ENST00000556343 LMBR1LQ6UX01 489 aa11.44□□□□□ -0.58
ACTN1-218ENST00000556343 PELP1Q8IZL8 1130 aaKnown RBP11.44□□□□□ -0.58
ACTN1-218ENST00000556343 SSH3Q8TE77 659 aa11.44□□□□□ -0.58
ACTN1-218ENST00000556343 JARID2Q92833 1246 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-218ENST00000556343 NLRP3Q96P20 1036 aa11.44□□□□□ -0.58
ACTN1-218ENST00000556343 DCTPP1Q9H773 170 aa11.44□□□□□ -0.58
ACTN1-218ENST00000556343 IGHDP01880 384 aa11.43□□□□□ -0.58
ACTN1-218ENST00000556343 SERPINB2P05120 415 aa11.43□□□□□ -0.58
ACTN1-218ENST00000556343 CTSWP56202 376 aa11.43□□□□□ -0.58
ACTN1-218ENST00000556343 G3BP1Q13283 466 aaKnown RBP eCLIP11.43□□□□□ -0.582e-8■□□□□ 9.2
ACTN1-218ENST00000556343 OS9Q13438 667 aaPredicted RBP11.43□□□□□ -0.58
ACTN1-218ENST00000556343 POLA2Q14181 598 aa11.43□□□□□ -0.58
ACTN1-218ENST00000556343 ERC1Q8IUD2 1116 aa11.43□□□□□ -0.58
ACTN1-218ENST00000556343 CNBD1Q8NA66 436 aa11.43□□□□□ -0.58
ACTN1-218ENST00000556343 ANO8Q9HCE9 1232 aaPredicted RBP11.43□□□□□ -0.58
ACTN1-218ENST00000556343 ARFGEF2Q9Y6D5 1785 aa11.43□□□□□ -0.58
ACTN1-218ENST00000556343 ANKRD18BA2A2Z9 1011 aa11.42□□□□□ -0.58
ACTN1-218ENST00000556343 SURF6O75683 361 aaKnown RBP11.42□□□□□ -0.58
ACTN1-218ENST00000556343 CSF1RP07333 972 aa11.42□□□□□ -0.58
ACTN1-218ENST00000556343 FOXO4P98177 505 aa11.42□□□□□ -0.58
ACTN1-218ENST00000556343 IFIT5Q13325 482 aaKnown RBP11.42□□□□□ -0.58
ACTN1-218ENST00000556343 ERFEQ4G0M1 354 aa11.42□□□□□ -0.58
ACTN1-218ENST00000556343 NUTM1Q86Y26 1132 aa11.42□□□□□ -0.58
ACTN1-218ENST00000556343 SIRT2Q8IXJ6 389 aa11.42□□□□□ -0.58
ACTN1-218ENST00000556343 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
ACTN1-218ENST00000556343 NUP188Q5SRE5 1749 aa11.41□□□□□ -0.58
ACTN1-218ENST00000556343 PNMA6EA0A0J9YXQ4 647 aa11.41□□□□□ -0.58
ACTN1-218ENST00000556343 HCLS1P14317 486 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-218ENST00000556343 EPHA10Q5JZY3 1008 aa11.41□□□□□ -0.58
ACTN1-218ENST00000556343 SMC5Q8IY18 1101 aa11.41□□□□□ -0.58
ACTN1-218ENST00000556343 TTLL11Q8NHH1 800 aa11.41□□□□□ -0.58
ACTN1-218ENST00000556343 KAZALD1Q96I82 304 aa11.41□□□□□ -0.58
ACTN1-218ENST00000556343 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
ACTN1-218ENST00000556343 KDM2BQ8NHM5 1336 aa11.4□□□□□ -0.58
ACTN1-218ENST00000556343 POLRMTO00411 1230 aaKnown RBP11.4□□□□□ -0.58
ACTN1-218ENST00000556343 MMP10P09238 476 aa11.4□□□□□ -0.58
ACTN1-218ENST00000556343 POLD1P28340 1107 aa11.4□□□□□ -0.58
ACTN1-218ENST00000556343 SF3B3Q15393 1217 aaKnown RBP11.4□□□□□ -0.58
ACTN1-218ENST00000556343 ANKRD45Q5TZF3 282 aa11.4□□□□□ -0.58
ACTN1-218ENST00000556343 KIF1BPQ96EK5 621 aa11.4□□□□□ -0.58
ACTN1-218ENST00000556343 CDC5LQ99459 802 aaKnown RBP11.4□□□□□ -0.58
ACTN1-218ENST00000556343 COPRSQ9NQ92 184 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms