RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.31
GTF2A1-204ENST00000556268 PRR36Q9H6K5 1346 aa13.14□□□□□ -0.31
GTF2A1-204ENST00000556268 NR3C2P08235 984 aa13.14□□□□□ -0.31
GTF2A1-204ENST00000556268 ADAM32Q8TC27 787 aa13.14□□□□□ -0.31
GTF2A1-204ENST00000556268 SLC10A4Q96EP9 437 aa13.14□□□□□ -0.31
GTF2A1-204ENST00000556268 BTG4Q9NY30 223 aa13.14□□□□□ -0.31
GTF2A1-204ENST00000556268 CCDC9Q9Y3X0 531 aaKnown RBP13.14□□□□□ -0.31
GTF2A1-204ENST00000556268 CAPN5O15484 640 aaPredicted RBP13.13□□□□□ -0.31
GTF2A1-204ENST00000556268 NR5A1Q13285 461 aa13.13□□□□□ -0.31
GTF2A1-204ENST00000556268 HIRIP3Q9BW71 556 aaPredicted RBP13.13□□□□□ -0.31
GTF2A1-204ENST00000556268 ATP13A2Q9NQ11 1180 aa13.13□□□□□ -0.31
GTF2A1-204ENST00000556268 ADGRB1O14514 1584 aa13.12□□□□□ -0.31
GTF2A1-204ENST00000556268 GPRASP1Q5JY77 1395 aa13.12□□□□□ -0.31
GTF2A1-204ENST00000556268 BRWD3Q6RI45 1802 aa13.12□□□□□ -0.31
GTF2A1-204ENST00000556268 GMPR2Q9P2T1 348 aaKnown RBP13.12□□□□□ -0.31
GTF2A1-204ENST00000556268 SPATA31A5Q5VU36 1347 aa13.12□□□□□ -0.31
GTF2A1-204ENST00000556268 SPATA31A7Q8IWB4 1347 aa13.12□□□□□ -0.31
GTF2A1-204ENST00000556268 NWD2Q9ULI1 1742 aa13.11□□□□□ -0.31
GTF2A1-204ENST00000556268 GPR37L1O60883 481 aa13.11□□□□□ -0.31
GTF2A1-204ENST00000556268 TIMP2P16035 220 aa13.11□□□□□ -0.31
GTF2A1-204ENST00000556268 WDR4P57081 412 aaKnown RBP13.11□□□□□ -0.31
GTF2A1-204ENST00000556268 DCAF11Q8TEB1 546 aa13.11□□□□□ -0.31
GTF2A1-204ENST00000556268 RAB3GAP2Q9H2M9 1393 aa13.1□□□□□ -0.31
GTF2A1-204ENST00000556268 BAG6P46379 1132 aa13.1□□□□□ -0.31
GTF2A1-204ENST00000556268 KLF16Q9BXK1 252 aaPredicted RBP13.1□□□□□ -0.31
GTF2A1-204ENST00000556268 EIF3AQ14152 1382 aaKnown RBP13.09□□□□□ -0.31
GTF2A1-204ENST00000556268 BMP1P13497 986 aa13.09□□□□□ -0.31
GTF2A1-204ENST00000556268 NGDNQ8NEJ9 315 aaKnown RBP13.09□□□□□ -0.31
GTF2A1-204ENST00000556268 NUDT16Q96DE0 195 aaKnown RBP13.09□□□□□ -0.31
GTF2A1-204ENST00000556268 NDUFB9Q9Y6M9 179 aa13.09□□□□□ -0.31
GTF2A1-204ENST00000556268 ADGRB2O60241 1585 aa13.08□□□□□ -0.32
GTF2A1-204ENST00000556268 APBB1O00213 710 aa13.07□□□□□ -0.32
GTF2A1-204ENST00000556268 ITPKCQ96DU7 683 aa13.07□□□□□ -0.32
GTF2A1-204ENST00000556268 KCTD15Q96SI1 283 aaPredicted RBP13.07□□□□□ -0.32
GTF2A1-204ENST00000556268 ZFAND3Q9H8U3 227 aa13.07□□□□□ -0.32
GTF2A1-204ENST00000556268 CDV3Q9UKY7 258 aaKnown RBP13.07□□□□□ -0.32
GTF2A1-204ENST00000556268 TRPM3Q9HCF6 1732 aaPredicted RBP13.07□□□□□ -0.32
GTF2A1-204ENST00000556268 ZBBXA8MT70 800 aa13.06□□□□□ -0.32
GTF2A1-204ENST00000556268 ZIC2O95409 532 aaPredicted RBP13.06□□□□□ -0.32
GTF2A1-204ENST00000556268 FBXO45P0C2W1 286 aa13.06□□□□□ -0.32
GTF2A1-204ENST00000556268 NBPF8Q3BBV2 869 aa13.06□□□□□ -0.32
GTF2A1-204ENST00000556268 PRDM11Q9NQV5 511 aa13.06□□□□□ -0.32
GTF2A1-204ENST00000556268 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
GTF2A1-204ENST00000556268 TULP4Q9NRJ4 1543 aa13.05□□□□□ -0.32
GTF2A1-204ENST00000556268 FAM182BQ5T319 152 aa13.05□□□□□ -0.32
GTF2A1-204ENST00000556268 TRIM46Q7Z4K8 759 aa13.05□□□□□ -0.32
GTF2A1-204ENST00000556268 CAMKK2Q96RR4 588 aa13.05□□□□□ -0.32
GTF2A1-204ENST00000556268 CDK19Q9BWU1 502 aa13.05□□□□□ -0.32
GTF2A1-204ENST00000556268 SPATA31A1Q5TZJ5 1347 aa13.05□□□□□ -0.32
GTF2A1-204ENST00000556268 ALS2Q96Q42 1657 aa13.05□□□□□ -0.32
GTF2A1-204ENST00000556268 ABCA3Q99758 1704 aa13.05□□□□□ -0.32
GTF2A1-204ENST00000556268 FAM196AQ6ZSG2 479 aa13.04□□□□□ -0.32
GTF2A1-204ENST00000556268 CCDC116Q8IYX3 515 aa13.04□□□□□ -0.32
GTF2A1-204ENST00000556268 DISP2A7MBM2 1401 aa13.04□□□□□ -0.32
GTF2A1-204ENST00000556268 NRAPQ86VF7 1730 aa13.03□□□□□ -0.32
GTF2A1-204ENST00000556268 COL14A1Q05707 1796 aaKnown RBP13.03□□□□□ -0.32
GTF2A1-204ENST00000556268 DZIP3Q86Y13 1208 aaKnown RBP13.03□□□□□ -0.32
GTF2A1-204ENST00000556268 POLR3AO14802 1390 aaPredicted RBP13.03□□□□□ -0.32
GTF2A1-204ENST00000556268 KIAA0232Q92628 1395 aa13.03□□□□□ -0.32
GTF2A1-204ENST00000556268 C11orf95C9JLR9 678 aaPredicted RBP13.02□□□□□ -0.33
GTF2A1-204ENST00000556268 ZC3H6P61129 1189 aaKnown RBP13.02□□□□□ -0.33
GTF2A1-204ENST00000556268 CHRNA2Q15822 529 aa13.02□□□□□ -0.33
GTF2A1-204ENST00000556268 EZH2Q15910 746 aaKnown RBP13.02□□□□□ -0.33
GTF2A1-204ENST00000556268 NBPF20Q3BBV1 942 aa13.02□□□□□ -0.33
GTF2A1-204ENST00000556268 INTS6LQ5JSJ4 861 aaKnown RBP13.02□□□□□ -0.33
GTF2A1-204ENST00000556268 TBC1D2BQ9UPU7 963 aa13.02□□□□□ -0.33
GTF2A1-204ENST00000556268 TRIM47Q96LD4 638 aa13.01□□□□□ -0.33
GTF2A1-204ENST00000556268 ACEP12821 1306 aa13.01□□□□□ -0.33
GTF2A1-204ENST00000556268 LRP5O75197 1615 aa13□□□□□ -0.33
GTF2A1-204ENST00000556268 ATP7BP35670 1465 aa13□□□□□ -0.33
GTF2A1-204ENST00000556268 NR1H3Q13133 447 aa13□□□□□ -0.33
GTF2A1-204ENST00000556268 MCM6Q14566 821 aa13□□□□□ -0.33
GTF2A1-204ENST00000556268 R3HDM1Q15032 1099 aaKnown RBP13□□□□□ -0.33
GTF2A1-204ENST00000556268 PPP1R26Q5T8A7 1209 aaPredicted RBP13□□□□□ -0.33
GTF2A1-204ENST00000556268 SENP2Q9HC62 589 aa13□□□□□ -0.33
GTF2A1-204ENST00000556268 EMILIN1Q9Y6C2 1016 aa13□□□□□ -0.33
GTF2A1-204ENST00000556268 TRIM37O94972 964 aa12.99□□□□□ -0.33
GTF2A1-204ENST00000556268 SNRPBP14678 240 aaKnown RBP12.99□□□□□ -0.33
GTF2A1-204ENST00000556268 EVA1CP58658 441 aa12.99□□□□□ -0.33
GTF2A1-204ENST00000556268 NUTM2GQ5VZR2 741 aa12.99□□□□□ -0.33
GTF2A1-204ENST00000556268 MRPL14Q6P1L8 145 aaKnown RBP12.99□□□□□ -0.33
GTF2A1-204ENST00000556268 STRN4Q9NRL3 753 aa12.99□□□□□ -0.33
GTF2A1-204ENST00000556268 PCDHB9Q9Y5E1 797 aa12.99□□□□□ -0.33
GTF2A1-204ENST00000556268 CPDO75976 1380 aa12.98□□□□□ -0.33
GTF2A1-204ENST00000556268 NBPF1Q3BBV0 1214 aa12.98□□□□□ -0.33
GTF2A1-204ENST00000556268 ABTB2Q8N961 1025 aa12.98□□□□□ -0.33
GTF2A1-204ENST00000556268 CRYBG1Q9Y4K1 1723 aa12.98□□□□□ -0.33
GTF2A1-204ENST00000556268 THSD7AQ9UPZ6 1657 aa12.98□□□□□ -0.33
GTF2A1-204ENST00000556268 APBA3O96018 575 aa12.97□□□□□ -0.33
GTF2A1-204ENST00000556268 GCP02774 474 aa12.97□□□□□ -0.33
GTF2A1-204ENST00000556268 RAB15P59190 212 aa12.97□□□□□ -0.33
GTF2A1-204ENST00000556268 TMEM132AQ24JP5 1023 aa12.97□□□□□ -0.33
GTF2A1-204ENST00000556268 LARP1Q6PKG0 1096 aaKnown RBP12.97□□□□□ -0.33
GTF2A1-204ENST00000556268 TCP11L2Q8N4U5 519 aa12.97□□□□□ -0.33
GTF2A1-204ENST00000556268 KIFC2Q96AC6 838 aa12.97□□□□□ -0.33
GTF2A1-204ENST00000556268 THRAP3Q9Y2W1 955 aaKnown RBP12.97□□□□□ -0.33
GTF2A1-204ENST00000556268 PARD3Q8TEW0 1356 aa12.96□□□□□ -0.33
GTF2A1-204ENST00000556268 USP19O94966 1318 aa12.96□□□□□ -0.33
GTF2A1-204ENST00000556268 PDE3BQ13370 1112 aa12.96□□□□□ -0.33
GTF2A1-204ENST00000556268 NLRP13Q86W25 1043 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms