RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 RBM46Q8TBY0 533 aaKnown RBP8.39□□□□□ -1.07
TMEM260-209ENST00000556079 ZBTB3Q9H5J0 574 aa8.39□□□□□ -1.07
TMEM260-209ENST00000556079 RRAGCQ9HB90 399 aa8.39□□□□□ -1.07
TMEM260-209ENST00000556079 RNF181Q9P0P0 153 aa8.39□□□□□ -1.07
TMEM260-209ENST00000556079 PIM2Q9P1W9 311 aa8.39□□□□□ -1.07
TMEM260-209ENST00000556079 ABCC12Q96J65 1359 aa8.38□□□□□ -1.07
TMEM260-209ENST00000556079 A0A087WZG4 1122 aa8.38□□□□□ -1.07
TMEM260-209ENST00000556079 ATMINO43313 823 aaPredicted RBP8.38□□□□□ -1.07
TMEM260-209ENST00000556079 GPTP24298 496 aa8.38□□□□□ -1.07
TMEM260-209ENST00000556079 OLFM4Q6UX06 510 aa8.38□□□□□ -1.07
TMEM260-209ENST00000556079 LRP10Q7Z4F1 713 aa8.38□□□□□ -1.07
TMEM260-209ENST00000556079 C2CD5Q86YS7 1000 aa8.38□□□□□ -1.07
TMEM260-209ENST00000556079 C16orf71Q8IYS4 520 aaPredicted RBP8.38□□□□□ -1.07
TMEM260-209ENST00000556079 KLRG1Q96E93 195 aa8.38□□□□□ -1.07
TMEM260-209ENST00000556079 TEX13AQ9BXU3 409 aaPredicted RBP8.38□□□□□ -1.07
TMEM260-209ENST00000556079 WDR90Q96KV7 1748 aa8.37□□□□□ -1.07
TMEM260-209ENST00000556079 UBN2Q6ZU65 1347 aa8.37□□□□□ -1.07
TMEM260-209ENST00000556079 TAF1P21675 1872 aa8.37□□□□□ -1.07
TMEM260-209ENST00000556079 ASTLQ6HA08 431 aaPredicted RBP8.37□□□□□ -1.07
TMEM260-209ENST00000556079 C3orf67Q6ZVT6 689 aa8.37□□□□□ -1.07
TMEM260-209ENST00000556079 MBIPQ9NS73 344 aa8.37□□□□□ -1.07
TMEM260-209ENST00000556079 SALL2Q9Y467 1007 aaPredicted RBP8.37□□□□□ -1.07
TMEM260-209ENST00000556079 ANKRD36CQ5JPF3 1778 aa8.37□□□□□ -1.07
TMEM260-209ENST00000556079 COL4A1P02462 1669 aa8.37□□□□□ -1.07
TMEM260-209ENST00000556079 KDM2BQ8NHM5 1336 aa8.36□□□□□ -1.07
TMEM260-209ENST00000556079 LAMB2P55268 1798 aa8.36□□□□□ -1.07
TMEM260-209ENST00000556079 ELL2O00472 640 aaPredicted RBP8.36□□□□□ -1.07
TMEM260-209ENST00000556079 CHL1O00533 1208 aa8.36□□□□□ -1.07
TMEM260-209ENST00000556079 TCERG1O14776 1098 aaKnown RBP8.36□□□□□ -1.07
TMEM260-209ENST00000556079 ATN1P54259 1190 aaPredicted RBP8.36□□□□□ -1.07
TMEM260-209ENST00000556079 AIMP1Q12904 312 aaKnown RBP8.36□□□□□ -1.07
TMEM260-209ENST00000556079 NUTM1Q86Y26 1132 aa8.36□□□□□ -1.07
TMEM260-209ENST00000556079 PNISRQ8TF01 805 aaKnown RBP8.36□□□□□ -1.07
TMEM260-209ENST00000556079 TSR2Q969E8 191 aaKnown RBP8.36□□□□□ -1.07
TMEM260-209ENST00000556079 MRS2Q9HD23 443 aa8.36□□□□□ -1.07
TMEM260-209ENST00000556079 NIP7Q9Y221 180 aaKnown RBP eCLIP8.36□□□□□ -1.07
TMEM260-209ENST00000556079 TIAM2Q8IVF5 1701 aa8.36□□□□□ -1.07
TMEM260-209ENST00000556079 ARFGEF2Q9Y6D5 1785 aa8.35□□□□□ -1.07
TMEM260-209ENST00000556079 FSTL1Q12841 308 aa8.35□□□□□ -1.07
TMEM260-209ENST00000556079 ERFEQ4G0M1 354 aa8.35□□□□□ -1.07
TMEM260-209ENST00000556079 IFNL1Q8IU54 200 aa8.35□□□□□ -1.07
TMEM260-209ENST00000556079 SYNE4Q8N205 404 aa8.35□□□□□ -1.07
TMEM260-209ENST00000556079 JMYQ8N9B5 988 aa8.35□□□□□ -1.07
TMEM260-209ENST00000556079 CNBD1Q8NA66 436 aa8.35□□□□□ -1.07
TMEM260-209ENST00000556079 XAGE3Q8WTP9 111 aa8.35□□□□□ -1.07
TMEM260-209ENST00000556079 ZNF622Q969S3 477 aaKnown RBP eCLIP8.35□□□□□ -1.07
TMEM260-209ENST00000556079 SETDB2Q96T68 719 aa8.35□□□□□ -1.07
TMEM260-209ENST00000556079 PNNQ9H307 717 aaKnown RBP8.35□□□□□ -1.07
TMEM260-209ENST00000556079 BMP2KQ9NSY1 1161 aaPredicted RBP8.35□□□□□ -1.07
TMEM260-209ENST00000556079 CHPF2Q9P2E5 772 aa8.35□□□□□ -1.07
TMEM260-209ENST00000556079 FER1L6Q2WGJ9 1857 aa8.34□□□□□ -1.07
TMEM260-209ENST00000556079 MAP3K15Q6ZN16 1313 aa8.34□□□□□ -1.07
TMEM260-209ENST00000556079 NFKBIEO00221 500 aa8.34□□□□□ -1.07
TMEM260-209ENST00000556079 C21orf2O43822 256 aa8.34□□□□□ -1.07
TMEM260-209ENST00000556079 ZNF853P0CG23 659 aa8.34□□□□□ -1.07
TMEM260-209ENST00000556079 LMOD3Q0VAK6 560 aa8.34□□□□□ -1.07
TMEM260-209ENST00000556079 GSE1Q14687 1217 aa8.34□□□□□ -1.07
TMEM260-209ENST00000556079 SUSD4Q5VX71 490 aa8.34□□□□□ -1.07
TMEM260-209ENST00000556079 NBPF5PQ86XG9 351 aaPredicted RBP8.34□□□□□ -1.07
TMEM260-209ENST00000556079 TSPYL6Q8N831 410 aa8.34□□□□□ -1.07
TMEM260-209ENST00000556079 C8orf58Q8NAV2 365 aa8.34□□□□□ -1.07
TMEM260-209ENST00000556079 H0YIN7 160 aa8.33□□□□□ -1.08
TMEM260-209ENST00000556079 NPHP1O15259 732 aa8.33□□□□□ -1.08
TMEM260-209ENST00000556079 ANP32CO43423 234 aa8.33□□□□□ -1.08
TMEM260-209ENST00000556079 DUSP27Q5VZP5 1158 aa8.33□□□□□ -1.08
TMEM260-209ENST00000556079 COPS6Q7L5N1 327 aa8.33□□□□□ -1.08
TMEM260-209ENST00000556079 NPM2Q86SE8 214 aaKnown RBP8.33□□□□□ -1.08
TMEM260-209ENST00000556079 SPOCK2Q92563 424 aa8.33□□□□□ -1.08
TMEM260-209ENST00000556079 METRNQ9UJH8 293 aa8.33□□□□□ -1.08
TMEM260-209ENST00000556079 CIZ1Q9ULV3 898 aaPredicted RBP8.33□□□□□ -1.08
TMEM260-209ENST00000556079 DDX60Q8IY21 1712 aaKnown RBP8.32□□□□□ -1.08
TMEM260-209ENST00000556079 NTSR2O95665 410 aa8.32□□□□□ -1.08
TMEM260-209ENST00000556079 HDGFL1Q5TGJ6 251 aa8.32□□□□□ -1.08
TMEM260-209ENST00000556079 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
TMEM260-209ENST00000556079 KIF6Q6ZMV9 814 aa8.32□□□□□ -1.08
TMEM260-209ENST00000556079 FAM9BQ8IZU0 186 aa8.32□□□□□ -1.08
TMEM260-209ENST00000556079 TNS4Q8IZW8 715 aa8.32□□□□□ -1.08
TMEM260-209ENST00000556079 TTLL6Q8N841 843 aa8.32□□□□□ -1.08
TMEM260-209ENST00000556079 SMC1BQ8NDV3 1235 aa8.32□□□□□ -1.08
TMEM260-209ENST00000556079 SLC39A7Q92504 469 aa8.32□□□□□ -1.08
TMEM260-209ENST00000556079 BRIP1Q9BX63 1249 aa8.32□□□□□ -1.08
TMEM260-209ENST00000556079 PHAXQ9H814 394 aaKnown RBP8.32□□□□□ -1.08
TMEM260-209ENST00000556079 COL4A5P29400 1685 aa8.32□□□□□ -1.08
TMEM260-209ENST00000556079 DICER1Q9UPY3 1922 aaKnown RBP8.31□□□□□ -1.08
TMEM260-209ENST00000556079 GLTPD2A6NH11 291 aa8.31□□□□□ -1.08
TMEM260-209ENST00000556079 POTECB2RU33 542 aa8.31□□□□□ -1.08
TMEM260-209ENST00000556079 ATP5J2-PTCD1G3V325 749 aa8.31□□□□□ -1.08
TMEM260-209ENST00000556079 HSPA1AP0DMV8 641 aaKnown RBP8.31□□□□□ -1.08
TMEM260-209ENST00000556079 HSPA1BP0DMV9 641 aaKnown RBP8.31□□□□□ -1.08
TMEM260-209ENST00000556079 SRGNP10124 158 aa8.31□□□□□ -1.08
TMEM260-209ENST00000556079 LMNB1P20700 586 aa8.31□□□□□ -1.08
TMEM260-209ENST00000556079 TIE1P35590 1138 aa8.31□□□□□ -1.08
TMEM260-209ENST00000556079 ST5P78524 1137 aa8.31□□□□□ -1.08
TMEM260-209ENST00000556079 ZNF34Q8IZ26 560 aa8.31□□□□□ -1.08
TMEM260-209ENST00000556079 JARID2Q92833 1246 aaPredicted RBP8.31□□□□□ -1.08
TMEM260-209ENST00000556079 CFAP44Q96MT7 982 aa8.31□□□□□ -1.08
TMEM260-209ENST00000556079 ZNF652Q9Y2D9 606 aa8.31□□□□□ -1.08
TMEM260-209ENST00000556079 TTLL13PA6NNM8 815 aa8.3□□□□□ -1.08
TMEM260-209ENST00000556079 HCLS1P14317 486 aaPredicted RBP8.3□□□□□ -1.08
TMEM260-209ENST00000556079 VEGFAP15692 232 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms