RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 NLRP10Q86W26 655 aa9.66□□□□□ -0.86
TDP1-214ENST00000556063 CNBD1Q8NA66 436 aa9.66□□□□□ -0.86
TDP1-214ENST00000556063 UTP14AQ9BVJ6 771 aaKnown RBP9.66□□□□□ -0.86
TDP1-214ENST00000556063 SRCIN1Q9C0H9 1055 aa9.66□□□□□ -0.86
TDP1-214ENST00000556063 CWC25Q9NXE8 425 aaPredicted RBP9.66□□□□□ -0.86
TDP1-214ENST00000556063 PPP1R1BQ9UD71 204 aaPredicted RBP9.66□□□□□ -0.86
TDP1-214ENST00000556063 ANKRD36CQ5JPF3 1778 aa9.65□□□□□ -0.86
TDP1-214ENST00000556063 IBTKQ9P2D0 1353 aaPredicted RBP9.65□□□□□ -0.86
TDP1-214ENST00000556063 POLRMTO00411 1230 aaKnown RBP9.65□□□□□ -0.86
TDP1-214ENST00000556063 TRIM27P14373 513 aa9.65□□□□□ -0.86
TDP1-214ENST00000556063 DDR1Q08345 913 aa9.65□□□□□ -0.86
TDP1-214ENST00000556063 DZIP1LQ8IYY4 767 aaKnown RBP9.65□□□□□ -0.86
TDP1-214ENST00000556063 TRMT112Q9UI30 125 aaKnown RBP9.65□□□□□ -0.86
TDP1-214ENST00000556063 HDAC5Q9UQL6 1122 aa9.65□□□□□ -0.86
TDP1-214ENST00000556063 SH3TC1Q8TE82 1336 aa9.64□□□□□ -0.87
TDP1-214ENST00000556063 FAM177BA6PVY3 158 aa9.64□□□□□ -0.87
TDP1-214ENST00000556063 NEURL1BA8MQ27 555 aa9.64□□□□□ -0.87
TDP1-214ENST00000556063 PTGER2P43116 358 aa9.64□□□□□ -0.87
TDP1-214ENST00000556063 BEND3Q5T5X7 828 aa9.64□□□□□ -0.87
TDP1-214ENST00000556063 SUSD4Q5VX71 490 aa9.64□□□□□ -0.87
TDP1-214ENST00000556063 CHMP4BQ9H444 224 aaKnown RBP9.64□□□□□ -0.87
TDP1-214ENST00000556063 C9orf78Q9NZ63 289 aaPredicted RBP9.64□□□□□ -0.87
TDP1-214ENST00000556063 PDZRN3Q9UPQ7 1066 aa9.64□□□□□ -0.87
TDP1-214ENST00000556063 PXDNLA1KZ92 1463 aa9.64□□□□□ -0.87
TDP1-214ENST00000556063 ABCC4O15439 1325 aa9.63□□□□□ -0.87
TDP1-214ENST00000556063 UBN2Q6ZU65 1347 aa9.63□□□□□ -0.87
TDP1-214ENST00000556063 COL24A1Q17RW2 1714 aa9.63□□□□□ -0.87
TDP1-214ENST00000556063 PCCAP05165 728 aaPredicted RBP9.63□□□□□ -0.87
TDP1-214ENST00000556063 IGKV5-2P06315 115 aa9.63□□□□□ -0.87
TDP1-214ENST00000556063 GCKRQ14397 625 aa9.63□□□□□ -0.87
TDP1-214ENST00000556063 PDE3AQ14432 1141 aa9.63□□□□□ -0.87
TDP1-214ENST00000556063 CWF19L2Q2TBE0 894 aaKnown RBP9.63□□□□□ -0.87
TDP1-214ENST00000556063 INTS3Q68E01 1043 aaKnown RBP9.63□□□□□ -0.87
TDP1-214ENST00000556063 ZBTB38Q8NAP3 1195 aaPredicted RBP9.63□□□□□ -0.87
TDP1-214ENST00000556063 CLUAP1Q96AJ1 413 aa9.63□□□□□ -0.87
TDP1-214ENST00000556063 SGIP1Q9BQI5 828 aa9.63□□□□□ -0.87
TDP1-214ENST00000556063 AFDNP55196 1824 aaKnown RBP9.63□□□□□ -0.87
TDP1-214ENST00000556063 GRM8O00222 908 aa9.62□□□□□ -0.87
TDP1-214ENST00000556063 NTSR2O95665 410 aa9.62□□□□□ -0.87
TDP1-214ENST00000556063 PDE6BP35913 854 aa9.62□□□□□ -0.87
TDP1-214ENST00000556063 PRR5LQ6MZQ0 368 aa9.62□□□□□ -0.87
TDP1-214ENST00000556063 KLHL34Q8N239 644 aa9.62□□□□□ -0.87
TDP1-214ENST00000556063 BRIP1Q9BX63 1249 aa9.62□□□□□ -0.87
TDP1-214ENST00000556063 CD2APQ9Y5K6 639 aa9.62□□□□□ -0.87
TDP1-214ENST00000556063 H7C1W4 665 aa9.61□□□□□ -0.87
TDP1-214ENST00000556063 IRS4O14654 1257 aaPredicted RBP9.61□□□□□ -0.87
TDP1-214ENST00000556063 GNAI3P08754 354 aa9.61□□□□□ -0.87
TDP1-214ENST00000556063 RRP1P56182 461 aaKnown RBP9.61□□□□□ -0.87
TDP1-214ENST00000556063 ERFEQ4G0M1 354 aa9.61□□□□□ -0.87
TDP1-214ENST00000556063 SLC10A5Q5PT55 438 aa9.61□□□□□ -0.87
TDP1-214ENST00000556063 UBE3BQ7Z3V4 1068 aa9.61□□□□□ -0.87
TDP1-214ENST00000556063 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
TDP1-214ENST00000556063 ITPRIPQ8IWB1 547 aa9.61□□□□□ -0.87
TDP1-214ENST00000556063 FAM89AQ96GI7 184 aa9.61□□□□□ -0.87
TDP1-214ENST00000556063 NLRP3Q96P20 1036 aa9.61□□□□□ -0.87
TDP1-214ENST00000556063 CDHR2Q9BYE9 1310 aa9.6□□□□□ -0.87
TDP1-214ENST00000556063 NRXN2Q9P2S2 1712 aa9.6□□□□□ -0.87
TDP1-214ENST00000556063 H0YIN7 160 aa9.6□□□□□ -0.87
TDP1-214ENST00000556063 PLIN1O60240 522 aa9.6□□□□□ -0.87
TDP1-214ENST00000556063 UBTFL1P0CB47 393 aaPredicted RBP9.6□□□□□ -0.87
TDP1-214ENST00000556063 TGFB2P61812 414 aa9.6□□□□□ -0.87
TDP1-214ENST00000556063 RTL5Q5HYW3 569 aaPredicted RBP9.6□□□□□ -0.87
TDP1-214ENST00000556063 TMEM57Q8N5G2 664 aa9.6□□□□□ -0.87
TDP1-214ENST00000556063 DDX19BQ9UMR2 479 aa9.6□□□□□ -0.87
TDP1-214ENST00000556063 RIC1Q4ADV7 1423 aa9.59□□□□□ -0.87
TDP1-214ENST00000556063 C10orf71Q711Q0 1435 aa9.59□□□□□ -0.87
TDP1-214ENST00000556063 PDE8AO60658 829 aa9.59□□□□□ -0.87
TDP1-214ENST00000556063 HCLS1P14317 486 aaPredicted RBP9.59□□□□□ -0.87
TDP1-214ENST00000556063 CCDC24Q8N4L8 307 aa9.59□□□□□ -0.87
TDP1-214ENST00000556063 PANK1Q8TE04 598 aa9.59□□□□□ -0.87
TDP1-214ENST00000556063 RPGRQ92834 1020 aaKnown RBP9.59□□□□□ -0.87
TDP1-214ENST00000556063 USP44Q9H0E7 712 aa9.59□□□□□ -0.87
TDP1-214ENST00000556063 SUPT16HQ9Y5B9 1047 aaKnown RBP9.59□□□□□ -0.87
TDP1-214ENST00000556063 N4BP2Q86UW6 1770 aaPredicted RBP9.59□□□□□ -0.87
TDP1-214ENST00000556063 LRP5O75197 1615 aa9.59□□□□□ -0.87
TDP1-214ENST00000556063 UTYO14607 1347 aa9.58□□□□□ -0.88
TDP1-214ENST00000556063 RLBP1P12271 317 aa9.58□□□□□ -0.88
TDP1-214ENST00000556063 MVPQ14764 893 aaKnown RBP9.58□□□□□ -0.88
TDP1-214ENST00000556063 CCDC152Q4G0S7 254 aa9.58□□□□□ -0.88
TDP1-214ENST00000556063 C2CD5Q86YS7 1000 aa9.58□□□□□ -0.88
TDP1-214ENST00000556063 JARID2Q92833 1246 aaPredicted RBP9.58□□□□□ -0.88
TDP1-214ENST00000556063 PLA2G12BQ9BX93 195 aa9.58□□□□□ -0.88
TDP1-214ENST00000556063 TNNQ9UQP3 1299 aa9.58□□□□□ -0.88
TDP1-214ENST00000556063 COG6Q9Y2V7 657 aa9.58□□□□□ -0.88
TDP1-214ENST00000556063 ABCC12Q96J65 1359 aa9.58□□□□□ -0.88
TDP1-214ENST00000556063 KLRG2A4D1S0 409 aaPredicted RBP9.57□□□□□ -0.88
TDP1-214ENST00000556063 GNAI2P04899 355 aa9.57□□□□□ -0.88
TDP1-214ENST00000556063 NBPF7P0C2Y1 421 aaPredicted RBP9.57□□□□□ -0.88
TDP1-214ENST00000556063 NPR1P16066 1061 aa9.57□□□□□ -0.88
TDP1-214ENST00000556063 ALDH1B1P30837 517 aa9.57□□□□□ -0.88
TDP1-214ENST00000556063 CTSWP56202 376 aa9.57□□□□□ -0.88
TDP1-214ENST00000556063 SF3B3Q15393 1217 aaKnown RBP9.57□□□□□ -0.88
TDP1-214ENST00000556063 STYK1Q6J9G0 422 aa9.57□□□□□ -0.88
TDP1-214ENST00000556063 DDX46Q7L014 1031 aaKnown RBP9.57□□□□□ -0.88
TDP1-214ENST00000556063 SYNE4Q8N205 404 aa9.57□□□□□ -0.88
TDP1-214ENST00000556063 CNKSR1Q969H4 720 aa9.57□□□□□ -0.88
TDP1-214ENST00000556063 MASTLQ96GX5 879 aa9.57□□□□□ -0.88
TDP1-214ENST00000556063 RBM17Q96I25 401 aaKnown RBP9.57□□□□□ -0.88
TDP1-214ENST00000556063 SYT17Q9BSW7 474 aa9.57□□□□□ -0.88
TDP1-214ENST00000556063 FHDC1Q9C0D6 1143 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms