RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 KDM3BQ7LBC6 1761 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 UBN2Q6ZU65 1347 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 BBOX1O75936 387 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 NTSR2O95665 410 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 TCIRG1Q13488 830 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 COPS6Q7L5N1 327 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 PNMA8AQ86V59 439 aaPredicted RBP10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 LDHDQ86WU2 507 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 RPGRQ92834 1020 aaKnown RBP10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 ZBTB3Q9H5J0 574 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 ADAMTS8Q9UP79 889 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 TRIM35Q9UPQ4 493 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 GPTP24298 496 aa10.16□□□□□ -0.78
PTCSC3-201ENST00000556013 GPC2Q8N158 579 aa10.16□□□□□ -0.78
PTCSC3-201ENST00000556013 TAF1DQ9H5J8 278 aaPredicted RBP10.16□□□□□ -0.78
PTCSC3-201ENST00000556013 PRKRIP1Q9H875 184 aaPredicted RBP10.16□□□□□ -0.78
PTCSC3-201ENST00000556013 ZNF277Q9NRM2 450 aaPredicted RBP10.16□□□□□ -0.78
PTCSC3-201ENST00000556013 CREBZFQ9NS37 354 aa10.16□□□□□ -0.78
PTCSC3-201ENST00000556013 ARFGEF2Q9Y6D5 1785 aa10.16□□□□□ -0.78
PTCSC3-201ENST00000556013 EIF6P56537 245 aaKnown RBP10.15□□□□□ -0.78
PTCSC3-201ENST00000556013 CALD1Q05682 793 aaKnown RBP10.15□□□□□ -0.78
PTCSC3-201ENST00000556013 TRIM28Q13263 835 aaKnown RBP10.15□□□□□ -0.78
PTCSC3-201ENST00000556013 TMC4Q7Z404 712 aa10.15□□□□□ -0.78
PTCSC3-201ENST00000556013 SP8Q8IXZ3 490 aa10.15□□□□□ -0.78
PTCSC3-201ENST00000556013 DBF4Q9UBU7 674 aaPredicted RBP10.15□□□□□ -0.78
PTCSC3-201ENST00000556013 HACL1Q9UJ83 578 aa10.15□□□□□ -0.78
PTCSC3-201ENST00000556013 ATP6V0A2Q9Y487 856 aa10.15□□□□□ -0.78
PTCSC3-201ENST00000556013 LAMB4A4D0S4 1761 aa10.15□□□□□ -0.78
PTCSC3-201ENST00000556013 COL11A2P13942 1736 aaPredicted RBP10.15□□□□□ -0.78
PTCSC3-201ENST00000556013 SNED1Q8TER0 1413 aa10.15□□□□□ -0.79
PTCSC3-201ENST00000556013 ABCC12Q96J65 1359 aa10.14□□□□□ -0.79
PTCSC3-201ENST00000556013 NUP98P52948 1817 aa10.14□□□□□ -0.79
PTCSC3-201ENST00000556013 HTRA3P83110 453 aa10.14□□□□□ -0.79
PTCSC3-201ENST00000556013 NEUROD2Q15784 382 aa10.14□□□□□ -0.79
PTCSC3-201ENST00000556013 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
PTCSC3-201ENST00000556013 NLRP10Q86W26 655 aa10.14□□□□□ -0.79
PTCSC3-201ENST00000556013 SUPT20HQ8NEM7 779 aa10.14□□□□□ -0.79
PTCSC3-201ENST00000556013 PLBD2Q8NHP8 589 aa10.14□□□□□ -0.79
PTCSC3-201ENST00000556013 XAGE3Q8WTP9 111 aa10.14□□□□□ -0.79
PTCSC3-201ENST00000556013 RTFDC1Q9BY42 306 aaPredicted RBP10.14□□□□□ -0.79
PTCSC3-201ENST00000556013 HYPKQ9NX55 129 aa10.14□□□□□ -0.79
PTCSC3-201ENST00000556013 PASKQ96RG2 1323 aa10.13□□□□□ -0.79
PTCSC3-201ENST00000556013 SCN4AP35499 1836 aa10.13□□□□□ -0.79
PTCSC3-201ENST00000556013 PPEF1O14829 653 aaPredicted RBP10.13□□□□□ -0.79
PTCSC3-201ENST00000556013 ITGBL1O95965 494 aaPredicted RBP10.13□□□□□ -0.79
PTCSC3-201ENST00000556013 ZNF853P0CG23 659 aa10.13□□□□□ -0.79
PTCSC3-201ENST00000556013 EPHX2P34913 555 aa10.13□□□□□ -0.79
PTCSC3-201ENST00000556013 PROSER3Q2NL68 480 aa10.13□□□□□ -0.79
PTCSC3-201ENST00000556013 NCBP3Q53F19 620 aaKnown RBP10.13□□□□□ -0.79
PTCSC3-201ENST00000556013 CCDC146Q8IYE0 955 aa10.13□□□□□ -0.79
PTCSC3-201ENST00000556013 SH3TC1Q8TE82 1336 aa10.12□□□□□ -0.79
PTCSC3-201ENST00000556013 HSP90B1P14625 803 aaKnown RBP10.12□□□□□ -0.79
PTCSC3-201ENST00000556013 GNAI1P63096 354 aa10.12□□□□□ -0.79
PTCSC3-201ENST00000556013 AIMP1Q12904 312 aaKnown RBP10.12□□□□□ -0.79
PTCSC3-201ENST00000556013 SF3B3Q15393 1217 aaKnown RBP10.12□□□□□ -0.79
PTCSC3-201ENST00000556013 HDGFL1Q5TGJ6 251 aa10.12□□□□□ -0.79
PTCSC3-201ENST00000556013 OLFM4Q6UX06 510 aa10.12□□□□□ -0.79
PTCSC3-201ENST00000556013 DDX46Q7L014 1031 aaKnown RBP10.12□□□□□ -0.79
PTCSC3-201ENST00000556013 LARGE2Q8N3Y3 721 aa10.12□□□□□ -0.79
PTCSC3-201ENST00000556013 ISCA1Q9BUE6 129 aa10.12□□□□□ -0.79
PTCSC3-201ENST00000556013 IFT57Q9NWB7 429 aa10.12□□□□□ -0.79
PTCSC3-201ENST00000556013 TRMT112Q9UI30 125 aaKnown RBP10.12□□□□□ -0.79
PTCSC3-201ENST00000556013 TIAM2Q8IVF5 1701 aa10.11□□□□□ -0.79
PTCSC3-201ENST00000556013 ANXA1P04083 346 aa10.11□□□□□ -0.79
PTCSC3-201ENST00000556013 POTEIP0CG38 1075 aa10.11□□□□□ -0.79
PTCSC3-201ENST00000556013 POTEJP0CG39 1038 aa10.11□□□□□ -0.79
PTCSC3-201ENST00000556013 DUSP27Q5VZP5 1158 aa10.11□□□□□ -0.79
PTCSC3-201ENST00000556013 USP50Q70EL3 339 aaPredicted RBP10.11□□□□□ -0.79
PTCSC3-201ENST00000556013 CNTROBQ8N137 903 aa10.11□□□□□ -0.79
PTCSC3-201ENST00000556013 LAS1LQ9Y4W2 734 aaKnown RBP10.11□□□□□ -0.79
PTCSC3-201ENST00000556013 ZNF541Q9H0D2 1346 aa10.1□□□□□ -0.79
PTCSC3-201ENST00000556013 TMEM88BA6NKF7 163 aa10.1□□□□□ -0.79
PTCSC3-201ENST00000556013 LMOD1P29536 600 aaPredicted RBP10.1□□□□□ -0.79
PTCSC3-201ENST00000556013 GRAPQ13588 217 aa10.1□□□□□ -0.79
PTCSC3-201ENST00000556013 C3orf67Q6ZVT6 689 aa10.1□□□□□ -0.79
PTCSC3-201ENST00000556013 NIM1KQ8IY84 436 aa10.1□□□□□ -0.79
PTCSC3-201ENST00000556013 MPNDQ8N594 471 aa10.1□□□□□ -0.79
PTCSC3-201ENST00000556013 GRAPLQ8TC17 118 aaPredicted RBP10.1□□□□□ -0.79
PTCSC3-201ENST00000556013 CHPF2Q9P2E5 772 aa10.1□□□□□ -0.79
PTCSC3-201ENST00000556013 ZNRF3Q9ULT6 936 aa10.1□□□□□ -0.79
PTCSC3-201ENST00000556013 CLEC11AQ9Y240 323 aa10.1□□□□□ -0.79
PTCSC3-201ENST00000556013 ABCC4O15439 1325 aa10.09□□□□□ -0.79
PTCSC3-201ENST00000556013 PCNTO95613 3336 aa10.09□□□□□ -0.79
PTCSC3-201ENST00000556013 APAF1O14727 1248 aa10.09□□□□□ -0.79
PTCSC3-201ENST00000556013 PPIP5K2O43314 1243 aa10.09□□□□□ -0.79
PTCSC3-201ENST00000556013 KIAA2012Q0VF49 1180 aa10.09□□□□□ -0.79
PTCSC3-201ENST00000556013 CCDC27Q2M243 656 aa10.09□□□□□ -0.79
PTCSC3-201ENST00000556013 KRT24Q2M2I5 525 aa10.09□□□□□ -0.79
PTCSC3-201ENST00000556013 EAPPQ56P03 285 aaPredicted RBP10.09□□□□□ -0.79
PTCSC3-201ENST00000556013 DPP8Q6V1X1 898 aaPredicted RBP10.09□□□□□ -0.79
PTCSC3-201ENST00000556013 NECTIN2Q92692 538 aa10.09□□□□□ -0.79
PTCSC3-201ENST00000556013 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
PTCSC3-201ENST00000556013 CDHR2Q9BYE9 1310 aa10.08□□□□□ -0.8
PTCSC3-201ENST00000556013 HCLS1P14317 486 aaPredicted RBP10.08□□□□□ -0.8
PTCSC3-201ENST00000556013 SCNN1DP51172 638 aa10.08□□□□□ -0.8
PTCSC3-201ENST00000556013 TNIP1Q15025 636 aa10.08□□□□□ -0.8
PTCSC3-201ENST00000556013 CCDC191Q8NCU4 936 aa10.08□□□□□ -0.8
PTCSC3-201ENST00000556013 ZC3H15Q8WU90 426 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms