RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CLASRPQ8N2M8 674 aaKnown RBP8.44□□□□□ -1.06
TDP1-213ENST00000555880 PI4K2BQ8TCG2 481 aa8.44□□□□□ -1.06
TDP1-213ENST00000555880 NBPF4Q96M43 638 aa8.44□□□□□ -1.06
TDP1-213ENST00000555880 BCL11BQ9C0K0 894 aaPredicted RBP8.44□□□□□ -1.06
TDP1-213ENST00000555880 C9orf78Q9NZ63 289 aaPredicted RBP8.44□□□□□ -1.06
TDP1-213ENST00000555880 RBM27Q9P2N5 1060 aaKnown RBP8.44□□□□□ -1.06
TDP1-213ENST00000555880 CRYBG1Q9Y4K1 1723 aa8.43□□□□□ -1.06
TDP1-213ENST00000555880 SYCE3A1L190 88 aa8.43□□□□□ -1.06
TDP1-213ENST00000555880 ALDH1L1O75891 902 aa8.43□□□□□ -1.06
TDP1-213ENST00000555880 MAP4K4O95819 1239 aaPredicted RBP8.43□□□□□ -1.06
TDP1-213ENST00000555880 PRIM1P49642 420 aaKnown RBP8.43□□□□□ -1.06
TDP1-213ENST00000555880 RBSNQ9H1K0 784 aa8.43□□□□□ -1.06
TDP1-213ENST00000555880 LGR6Q9HBX8 967 aa8.43□□□□□ -1.06
TDP1-213ENST00000555880 USP42Q9H9J4 1324 aaKnown RBP8.43□□□□□ -1.06
TDP1-213ENST00000555880 TMEM121BQ9BXQ6 578 aaPredicted RBP8.43□□□□□ -1.06
TDP1-213ENST00000555880 TMEM63CQ9P1W3 806 aa8.43□□□□□ -1.06
TDP1-213ENST00000555880 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.43□□□□□ -1.06
TDP1-213ENST00000555880 ATP6V1DQ9Y5K8 247 aa8.43□□□□□ -1.06
TDP1-213ENST00000555880 DDX58O95786 925 aaKnown RBP8.42□□□□□ -1.06
TDP1-213ENST00000555880 IFIT2P09913 472 aaKnown RBP8.42□□□□□ -1.06
TDP1-213ENST00000555880 MTX1Q13505 466 aa8.42□□□□□ -1.06
TDP1-213ENST00000555880 CWC27Q6UX04 472 aaKnown RBP8.42□□□□□ -1.06
TDP1-213ENST00000555880 MPRIPQ6WCQ1 1025 aa8.42□□□□□ -1.06
TDP1-213ENST00000555880 LSG1Q9H089 658 aaKnown RBP8.42□□□□□ -1.06
TDP1-213ENST00000555880 TSPY26PQ9H489 355 aa8.42□□□□□ -1.06
TDP1-213ENST00000555880 ECHDC1Q9NTX5 307 aa8.42□□□□□ -1.06
TDP1-213ENST00000555880 HYPKQ9NX55 129 aa8.42□□□□□ -1.06
TDP1-213ENST00000555880 LIMCH1Q9UPQ0 1083 aa8.42□□□□□ -1.06
TDP1-213ENST00000555880 SNX14Q9Y5W7 946 aa8.42□□□□□ -1.06
TDP1-213ENST00000555880 ADCY9O60503 1353 aa8.42□□□□□ -1.06
TDP1-213ENST00000555880 RGL2O15211 777 aa8.41□□□□□ -1.06
TDP1-213ENST00000555880 RNMTO43148 476 aaKnown RBP8.41□□□□□ -1.06
TDP1-213ENST00000555880 ATF3P18847 181 aa8.41□□□□□ -1.06
TDP1-213ENST00000555880 KSR2Q6VAB6 950 aa8.41□□□□□ -1.06
TDP1-213ENST00000555880 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.41□□□□□ -1.06
TDP1-213ENST00000555880 C19orf44Q9H6X5 657 aa8.41□□□□□ -1.06
TDP1-213ENST00000555880 MAP3K2Q9Y2U5 619 aa8.41□□□□□ -1.06
TDP1-213ENST00000555880 HIP1O00291 1037 aa8.4□□□□□ -1.06
TDP1-213ENST00000555880 TPM2P07951 284 aa8.4□□□□□ -1.06
TDP1-213ENST00000555880 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.06
TDP1-213ENST00000555880 MICALL2Q8IY33 904 aa8.4□□□□□ -1.06
TDP1-213ENST00000555880 LRRC59Q96AG4 307 aaKnown RBP8.4□□□□□ -1.06
TDP1-213ENST00000555880 CHAMP1Q96JM3 812 aa8.4□□□□□ -1.06
TDP1-213ENST00000555880 PDLIM2Q96JY6 352 aa8.4□□□□□ -1.06
TDP1-213ENST00000555880 IL25Q9H293 177 aa8.4□□□□□ -1.06
TDP1-213ENST00000555880 CCDC39Q9UFE4 941 aa8.4□□□□□ -1.06
TDP1-213ENST00000555880 SMC3Q9UQE7 1217 aa8.4□□□□□ -1.06
TDP1-213ENST00000555880 STK24Q9Y6E0 443 aa8.4□□□□□ -1.06
TDP1-213ENST00000555880 KCNQ3O43525 872 aa8.4□□□□□ -1.07
TDP1-213ENST00000555880 LETM1O95202 739 aaPredicted RBP8.4□□□□□ -1.07
TDP1-213ENST00000555880 ANXA1P04083 346 aa8.4□□□□□ -1.07
TDP1-213ENST00000555880 ZSCAN22P10073 491 aaPredicted RBP8.4□□□□□ -1.07
TDP1-213ENST00000555880 ZKSCAN1P17029 563 aaPredicted RBP8.4□□□□□ -1.07
TDP1-213ENST00000555880 CASTP20810 708 aaKnown RBP8.4□□□□□ -1.07
TDP1-213ENST00000555880 MCM5P33992 734 aa8.4□□□□□ -1.07
TDP1-213ENST00000555880 AK2P54819 239 aa8.4□□□□□ -1.07
TDP1-213ENST00000555880 LMOD2Q6P5Q4 547 aa8.4□□□□□ -1.07
TDP1-213ENST00000555880 FAM184AQ8NB25 1140 aa8.4□□□□□ -1.07
TDP1-213ENST00000555880 EVI5LQ96CN4 794 aa8.4□□□□□ -1.07
TDP1-213ENST00000555880 ZSCAN31Q96LW9 406 aaPredicted RBP8.4□□□□□ -1.07
TDP1-213ENST00000555880 NOL7Q9UMY1 257 aaKnown RBP8.4□□□□□ -1.07
TDP1-213ENST00000555880 SPG7Q9UQ90 795 aa8.4□□□□□ -1.07
TDP1-213ENST00000555880 CYP46A1Q9Y6A2 500 aa8.4□□□□□ -1.07
TDP1-213ENST00000555880 TCHHQ07283 1943 aa8.4□□□□□ -1.07
TDP1-213ENST00000555880 PXDNQ92626 1479 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 SIPA1L3O60292 1781 aaPredicted RBP8.39□□□□□ -1.07
TDP1-213ENST00000555880 SLIT3O75094 1523 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 STK25O00506 426 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 STX6O43752 255 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 GIGYF1O75420 1035 aaPredicted RBP8.39□□□□□ -1.07
TDP1-213ENST00000555880 GCP02774 474 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 KCNJ4P48050 445 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 G3BP1Q13283 466 aaKnown RBP eCLIP8.39□□□□□ -1.07
TDP1-213ENST00000555880 FOXD4L6Q3SYB3 417 aaPredicted RBP8.39□□□□□ -1.07
TDP1-213ENST00000555880 FOXD4L3Q6VB84 417 aaPredicted RBP8.39□□□□□ -1.07
TDP1-213ENST00000555880 USP48Q86UV5 1035 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 AACSQ86V21 672 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 TMEM87AQ8NBN3 555 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 LINS1Q8NG48 757 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 ANKRD24Q8TF21 1146 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 TTC14Q96N46 770 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 SH2B1Q9NRF2 756 aaPredicted RBP8.39□□□□□ -1.07
TDP1-213ENST00000555880 NSFL1CQ9UNZ2 370 aaKnown RBP8.39□□□□□ -1.07
TDP1-213ENST00000555880 RPAP1Q9BWH6 1393 aaPredicted RBP8.39□□□□□ -1.07
TDP1-213ENST00000555880 CAMTA1Q9Y6Y1 1673 aa8.39□□□□□ -1.07
TDP1-213ENST00000555880 GRM8O00222 908 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 OFD1O75665 1012 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 PTMAP06454 111 aaKnown RBP8.38□□□□□ -1.07
TDP1-213ENST00000555880 NEXNQ0ZGT2 675 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 CCDC183Q5T5S1 534 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 VPS53Q5VIR6 699 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 RUFY3Q7L099 469 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 ARHGEF25Q86VW2 580 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 JAKMIP1Q96N16 626 aaKnown RBP8.38□□□□□ -1.07
TDP1-213ENST00000555880 TM6SF1Q9BZW5 370 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 PDRG1Q9NUG6 133 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 LMTK3Q96Q04 1460 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 PDIA4P13667 645 aaKnown RBP8.38□□□□□ -1.07
TDP1-213ENST00000555880 UBE2HP62256 183 aa8.38□□□□□ -1.07
TDP1-213ENST00000555880 PRPF40BQ6NWY9 871 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms